RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 WDR66Q8TBY9 1149 aa7.75□□□□□ -1.17
CHRNA6-202ENST00000529467 SHISA4Q96DD7 197 aa7.75□□□□□ -1.17
CHRNA6-202ENST00000529467 TRIM47Q96LD4 638 aa7.75□□□□□ -1.17
CHRNA6-202ENST00000529467 FAM198AQ9UFP1 575 aa7.75□□□□□ -1.17
CHRNA6-202ENST00000529467 METRNQ9UJH8 293 aa7.75□□□□□ -1.17
CHRNA6-202ENST00000529467 DAGLAQ9Y4D2 1042 aa7.75□□□□□ -1.17
CHRNA6-202ENST00000529467 ZNF521Q96K83 1311 aa7.75□□□□□ -1.17
CHRNA6-202ENST00000529467 MGAMO43451 1857 aa7.75□□□□□ -1.17
CHRNA6-202ENST00000529467 CXCL11O14625 94 aa7.74□□□□□ -1.17
CHRNA6-202ENST00000529467 BCRP11274 1271 aa7.74□□□□□ -1.17
CHRNA6-202ENST00000529467 HOXD10P28358 340 aa7.74□□□□□ -1.17
CHRNA6-202ENST00000529467 GRK4P32298 578 aa7.74□□□□□ -1.17
CHRNA6-202ENST00000529467 TCP10Q12799 353 aa7.74□□□□□ -1.17
CHRNA6-202ENST00000529467 NFIAQ12857 509 aa7.74□□□□□ -1.17
CHRNA6-202ENST00000529467 DIXDC1Q155Q3 683 aa7.74□□□□□ -1.17
CHRNA6-202ENST00000529467 UBE2Q1Q7Z7E8 422 aa7.74□□□□□ -1.17
CHRNA6-202ENST00000529467 ZFPM1Q8IX07 1006 aa7.74□□□□□ -1.17
CHRNA6-202ENST00000529467 SSH1Q8WYL5 1049 aa7.74□□□□□ -1.17
CHRNA6-202ENST00000529467 LPIN2Q92539 896 aa7.74□□□□□ -1.17
CHRNA6-202ENST00000529467 PTPRCP08575 1304 aa7.74□□□□□ -1.17
CHRNA6-202ENST00000529467 MYH2Q9UKX2 1941 aa7.74□□□□□ -1.17
CHRNA6-202ENST00000529467 PHF20L1A8MW92 1017 aa7.73□□□□□ -1.17
CHRNA6-202ENST00000529467 FMNL1O95466 1100 aaPredicted RBP7.73□□□□□ -1.17
CHRNA6-202ENST00000529467 GJB1P08034 283 aa7.73□□□□□ -1.17
CHRNA6-202ENST00000529467 SLC5A1P13866 664 aa7.73□□□□□ -1.17
CHRNA6-202ENST00000529467 PRDX5P30044 214 aa7.73□□□□□ -1.17
CHRNA6-202ENST00000529467 TIE1P35590 1138 aa7.73□□□□□ -1.17
CHRNA6-202ENST00000529467 GJA8P48165 433 aa7.73□□□□□ -1.17
CHRNA6-202ENST00000529467 MAP3K10Q02779 954 aa7.73□□□□□ -1.17
CHRNA6-202ENST00000529467 NKX2-3Q8TAU0 364 aa7.73□□□□□ -1.17
CHRNA6-202ENST00000529467 RAET1EQ8TD07 263 aa7.73□□□□□ -1.17
CHRNA6-202ENST00000529467 DPF3Q92784 378 aa7.73□□□□□ -1.17
CHRNA6-202ENST00000529467 USP40Q9NVE5 1235 aa7.73□□□□□ -1.17
CHRNA6-202ENST00000529467 MYPNQ86TC9 1320 aa7.73□□□□□ -1.17
CHRNA6-202ENST00000529467 A0A0G2JLL6 359 aaPredicted RBP7.72□□□□□ -1.17
CHRNA6-202ENST00000529467 LDHBP07195 334 aaKnown RBP7.72□□□□□ -1.17
CHRNA6-202ENST00000529467 NEFLP07196 543 aa7.72□□□□□ -1.17
CHRNA6-202ENST00000529467 CYP2C8P10632 490 aa7.72□□□□□ -1.17
CHRNA6-202ENST00000529467 CCL5P13501 91 aa7.72□□□□□ -1.17
CHRNA6-202ENST00000529467 ATN1P54259 1190 aaPredicted RBP7.72□□□□□ -1.17
CHRNA6-202ENST00000529467 PRRT2Q7Z6L0 340 aaPredicted RBP7.72□□□□□ -1.17
CHRNA6-202ENST00000529467 PARK7Q99497 189 aaKnown RBP7.72□□□□□ -1.17
CHRNA6-202ENST00000529467 IDI2Q9BXS1 227 aa7.72□□□□□ -1.17
CHRNA6-202ENST00000529467 RNF208Q9H0X6 261 aa7.72□□□□□ -1.17
CHRNA6-202ENST00000529467 PRO3102Q9H379 93 aa7.72□□□□□ -1.17
CHRNA6-202ENST00000529467 RBM27Q9P2N5 1060 aaKnown RBP7.72□□□□□ -1.17
CHRNA6-202ENST00000529467 ZBTB47Q9UFB7 747 aaPredicted RBP7.72□□□□□ -1.17
CHRNA6-202ENST00000529467 FBXO3Q9UK99 471 aa7.72□□□□□ -1.17
CHRNA6-202ENST00000529467 GABRQQ9UN88 632 aa7.72□□□□□ -1.17
CHRNA6-202ENST00000529467 AFG3L2Q9Y4W6 797 aa7.72□□□□□ -1.17
CHRNA6-202ENST00000529467 ZHX2Q9Y6X8 837 aa7.72□□□□□ -1.17
CHRNA6-202ENST00000529467 TRIOBPQ9H2D6 2365 aa7.72□□□□□ -1.17
CHRNA6-202ENST00000529467 SALL1Q9NSC2 1324 aa7.72□□□□□ -1.17
CHRNA6-202ENST00000529467 CEP290O15078 2479 aa7.72□□□□□ -1.17
CHRNA6-202ENST00000529467 PTPRFP10586 1907 aa7.72□□□□□ -1.17
CHRNA6-202ENST00000529467 ATRNL1Q5VV63 1379 aa7.71□□□□□ -1.17
CHRNA6-202ENST00000529467 PHIPQ8WWQ0 1821 aa7.71□□□□□ -1.17
CHRNA6-202ENST00000529467 SEMA3EO15041 775 aa7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 ENTPD3O75355 529 aa7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 CIAO1O76071 339 aa7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 SGPL1O95470 568 aa7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 SLURP2P0DP57 97 aa7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 PTPRAP18433 802 aa7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 PHKA1P46020 1223 aa7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 RGS3P49796 1198 aa7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 NUBP1P53384 320 aa7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 FCGRTP55899 365 aa7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 UBXN2AP68543 259 aa7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 PRKCZQ05513 592 aa7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 ATP2B3Q16720 1220 aa7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 SH3BP5LQ7L8J4 393 aa7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 FASTKD5Q7L8L6 764 aaKnown RBP7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 SCYL3Q8IZE3 742 aa7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 U2AF1L4Q8WU68 220 aaKnown RBP7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 FAM163AQ96GL9 167 aaPredicted RBP7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 UNC93B1Q9H1C4 597 aa7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 BMP2KQ9NSY1 1161 aaPredicted RBP7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 GNL3LQ9NVN8 582 aaKnown RBP7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 CEP126Q9P2H0 1117 aa7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 BIN2Q9UBW5 565 aaPredicted RBP7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 DENND2AQ9ULE3 1009 aa7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 SLC45A1Q9Y2W3 748 aa7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 GTF3C3Q9Y5Q9 886 aa7.71□□□□□ -1.18
CHRNA6-202ENST00000529467 DDTLA6NHG4 134 aaPredicted RBP7.7□□□□□ -1.18
CHRNA6-202ENST00000529467 E9PSI1 815 aa7.7□□□□□ -1.18
CHRNA6-202ENST00000529467 MAP3K13O43283 966 aa7.7□□□□□ -1.18
CHRNA6-202ENST00000529467 CTNND1O60716 968 aaKnown RBP7.7□□□□□ -1.18
CHRNA6-202ENST00000529467 CT47B1P0C2W7 299 aaPredicted RBP7.7□□□□□ -1.18
CHRNA6-202ENST00000529467 FLT3LGP49771 235 aa7.7□□□□□ -1.18
CHRNA6-202ENST00000529467 SLFN5Q08AF3 891 aa7.7□□□□□ -1.18
CHRNA6-202ENST00000529467 ALDH1L2Q3SY69 923 aa7.7□□□□□ -1.18
CHRNA6-202ENST00000529467 TRMT2AQ8IZ69 625 aaKnown RBP7.7□□□□□ -1.18
CHRNA6-202ENST00000529467 SLAIN1Q8ND83 568 aa7.7□□□□□ -1.18
CHRNA6-202ENST00000529467 PXYLP1Q8TE99 480 aa7.7□□□□□ -1.18
CHRNA6-202ENST00000529467 HTATIP2Q9BUP3 242 aa7.7□□□□□ -1.18
CHRNA6-202ENST00000529467 SIL1Q9H173 461 aa7.7□□□□□ -1.18
CHRNA6-202ENST00000529467 DDX4Q9NQI0 724 aaKnown RBP7.7□□□□□ -1.18
CHRNA6-202ENST00000529467 GAKO14976 1311 aa7.7□□□□□ -1.18
CHRNA6-202ENST00000529467 DOCK2Q92608 1830 aa7.69□□□□□ -1.18
CHRNA6-202ENST00000529467 ZBTB7BO15156 539 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms