RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 CCDC8Q9H0W5 538 aaPredicted RBP16.02■□□□□ 0.16
SSH3-206ENST00000529224 SNRKQ9NRH2 765 aa16.02■□□□□ 0.16
SSH3-206ENST00000529224 PDE4DIPQ5VU43 2346 aa16.01■□□□□ 0.15
SSH3-206ENST00000529224 TESPA1A2RU30 521 aaPredicted RBP16.01■□□□□ 0.15
SSH3-206ENST00000529224 IGSF3O75054 1194 aa16.01■□□□□ 0.15
SSH3-206ENST00000529224 C20orf194Q5TEA3 1177 aa16.01■□□□□ 0.15
SSH3-206ENST00000529224 MIGA2Q7L4E1 593 aa16.01■□□□□ 0.15
SSH3-206ENST00000529224 AACSQ86V21 672 aa16.01■□□□□ 0.15
SSH3-206ENST00000529224 MS4A4AQ96JQ5 239 aa16.01■□□□□ 0.15
SSH3-206ENST00000529224 MYH1P12882 1939 aa16■□□□□ 0.15
SSH3-206ENST00000529224 DOCK1Q14185 1865 aa16■□□□□ 0.15
SSH3-206ENST00000529224 SPDYE5A6NIY4 337 aa16■□□□□ 0.15
SSH3-206ENST00000529224 WDHD1O75717 1129 aaPredicted RBP16■□□□□ 0.15
SSH3-206ENST00000529224 RHBDL3P58872 404 aa16■□□□□ 0.15
SSH3-206ENST00000529224 CRHR2Q13324 411 aa16■□□□□ 0.15
SSH3-206ENST00000529224 FBXO46Q6PJ61 603 aaPredicted RBP16■□□□□ 0.15
SSH3-206ENST00000529224 ERO1BQ86YB8 467 aa16■□□□□ 0.15
SSH3-206ENST00000529224 ZSCAN29Q8IWY8 852 aaPredicted RBP16■□□□□ 0.15
SSH3-206ENST00000529224 ZFPM1Q8IX07 1006 aa16■□□□□ 0.15
SSH3-206ENST00000529224 SIRT2Q8IXJ6 389 aa16■□□□□ 0.15
SSH3-206ENST00000529224 RHPN1Q8TCX5 695 aa16■□□□□ 0.15
SSH3-206ENST00000529224 KIF1BPQ96EK5 621 aa16■□□□□ 0.15
SSH3-206ENST00000529224 OTUD5Q96G74 571 aa16■□□□□ 0.15
SSH3-206ENST00000529224 NOL10Q9BSC4 688 aaKnown RBP16■□□□□ 0.15
SSH3-206ENST00000529224 TLR7Q9NYK1 1049 aaKnown RBP16■□□□□ 0.15
SSH3-206ENST00000529224 SNCAIPQ9Y6H5 919 aa16■□□□□ 0.15
SSH3-206ENST00000529224 ATAD5Q96QE3 1844 aa16■□□□□ 0.15
SSH3-206ENST00000529224 PTPRFP10586 1907 aa16■□□□□ 0.15
SSH3-206ENST00000529224 MYH7P12883 1935 aa16■□□□□ 0.15
SSH3-206ENST00000529224 RAB11FIP3O75154 756 aa15.99■□□□□ 0.15
SSH3-206ENST00000529224 NPM3O75607 178 aaKnown RBP15.99■□□□□ 0.15
SSH3-206ENST00000529224 CYP2E1P05181 493 aaPredicted RBP15.99■□□□□ 0.15
SSH3-206ENST00000529224 ZAP70P43403 619 aa15.99■□□□□ 0.15
SSH3-206ENST00000529224 GTF2A2P52657 109 aa15.99■□□□□ 0.15
SSH3-206ENST00000529224 NAA16Q6N069 864 aaPredicted RBP15.99■□□□□ 0.15
SSH3-206ENST00000529224 CLASRPQ8N2M8 674 aaKnown RBP15.99■□□□□ 0.15
SSH3-206ENST00000529224 BRI3BPQ8WY22 251 aa15.99■□□□□ 0.15
SSH3-206ENST00000529224 ZKSCAN4Q969J2 545 aaPredicted RBP15.99■□□□□ 0.15
SSH3-206ENST00000529224 DDX4Q9NQI0 724 aaKnown RBP15.99■□□□□ 0.15
SSH3-206ENST00000529224 ZNF112Q9UJU3 913 aa15.99■□□□□ 0.15
SSH3-206ENST00000529224 PLCG2P16885 1265 aa15.98■□□□□ 0.15
SSH3-206ENST00000529224 INPP5BP32019 993 aa15.98■□□□□ 0.15
SSH3-206ENST00000529224 CAP1Q01518 475 aa15.98■□□□□ 0.15
SSH3-206ENST00000529224 PICALMQ13492 652 aa15.98■□□□□ 0.15
SSH3-206ENST00000529224 IL1RAPL2Q9NP60 686 aa15.98■□□□□ 0.15
SSH3-206ENST00000529224 PHIPQ8WWQ0 1821 aa15.98■□□□□ 0.15
SSH3-206ENST00000529224 APBB1O00213 710 aa15.97■□□□□ 0.15
SSH3-206ENST00000529224 BAG3O95817 575 aa15.97■□□□□ 0.15
SSH3-206ENST00000529224 PPIL2Q13356 520 aa15.97■□□□□ 0.15
SSH3-206ENST00000529224 NOL9Q5SY16 702 aaKnown RBP15.97■□□□□ 0.15
SSH3-206ENST00000529224 TEX11Q8IYF3 940 aa15.97■□□□□ 0.15
SSH3-206ENST00000529224 ATRNL1Q5VV63 1379 aa15.97■□□□□ 0.15
SSH3-206ENST00000529224 COL2A1P02458 1487 aaPredicted RBP15.97■□□□□ 0.15
SSH3-206ENST00000529224 CENPFP49454 3210 aa15.96■□□□□ 0.15
SSH3-206ENST00000529224 CCL15-CCL14A0A0B4J2E2 113 aa15.96■□□□□ 0.15
SSH3-206ENST00000529224 IFIT2P09913 472 aaKnown RBP15.96■□□□□ 0.15
SSH3-206ENST00000529224 CETPP11597 493 aa15.96■□□□□ 0.15
SSH3-206ENST00000529224 PPATQ06203 517 aa15.96■□□□□ 0.15
SSH3-206ENST00000529224 SNAPC2Q13487 334 aa15.96■□□□□ 0.15
SSH3-206ENST00000529224 CCL15Q16663 113 aa15.96■□□□□ 0.15
SSH3-206ENST00000529224 SH3BP5LQ7L8J4 393 aa15.96■□□□□ 0.15
SSH3-206ENST00000529224 OTOP1Q7RTM1 612 aa15.96■□□□□ 0.15
SSH3-206ENST00000529224 PIH1D3Q9NQM4 214 aaKnown RBP15.96■□□□□ 0.15
SSH3-206ENST00000529224 TRIM17Q9Y577 477 aa15.96■□□□□ 0.15
SSH3-206ENST00000529224 DDTLA6NHG4 134 aaPredicted RBP15.95■□□□□ 0.14
SSH3-206ENST00000529224 IRF6O14896 467 aa15.95■□□□□ 0.14
SSH3-206ENST00000529224 PPP4CP60510 307 aa15.95■□□□□ 0.14
SSH3-206ENST00000529224 MAP3K10Q02779 954 aa15.95■□□□□ 0.14
SSH3-206ENST00000529224 FAM43AQ8N2R8 423 aa15.95■□□□□ 0.14
SSH3-206ENST00000529224 CD99L2Q8TCZ2 262 aa15.95■□□□□ 0.14
SSH3-206ENST00000529224 AATFQ9NY61 560 aaKnown RBP eCLIP15.95■□□□□ 0.14
SSH3-206ENST00000529224 SIPA1L1O43166 1804 aa15.94■□□□□ 0.14
SSH3-206ENST00000529224 PHF20L1A8MW92 1017 aa15.94■□□□□ 0.14
SSH3-206ENST00000529224 IDH1O75874 414 aaKnown RBP15.94■□□□□ 0.14
SSH3-206ENST00000529224 TMED8Q6PL24 325 aaPredicted RBP15.94■□□□□ 0.14
SSH3-206ENST00000529224 SH3RF3Q8TEJ3 882 aaPredicted RBP15.94■□□□□ 0.14
SSH3-206ENST00000529224 OSBPL5Q9H0X9 879 aaPredicted RBP15.94■□□□□ 0.14
SSH3-206ENST00000529224 TBC1D12O60347 775 aa15.93■□□□□ 0.14
SSH3-206ENST00000529224 CYP7A1P22680 504 aa15.93■□□□□ 0.14
SSH3-206ENST00000529224 MAP3K12Q12852 859 aa15.93■□□□□ 0.14
SSH3-206ENST00000529224 TTF1Q15361 905 aaPredicted RBP15.93■□□□□ 0.14
SSH3-206ENST00000529224 CERS3Q8IU89 383 aa15.93■□□□□ 0.14
SSH3-206ENST00000529224 SCYL3Q8IZE3 742 aa15.93■□□□□ 0.14
SSH3-206ENST00000529224 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.93■□□□□ 0.14
SSH3-206ENST00000529224 ERO1AQ96HE7 468 aa15.93■□□□□ 0.14
SSH3-206ENST00000529224 ZCCHC17Q9NP64 241 aaKnown RBP15.93■□□□□ 0.14
SSH3-206ENST00000529224 PICK1Q9NRD5 415 aa15.93■□□□□ 0.14
SSH3-206ENST00000529224 BRCA2P51587 3418 aa15.93■□□□□ 0.14
SSH3-206ENST00000529224 CTNND1O60716 968 aaKnown RBP15.92■□□□□ 0.14
SSH3-206ENST00000529224 SP3Q02447 781 aa15.92■□□□□ 0.14
SSH3-206ENST00000529224 TAF1CQ15572 869 aaPredicted RBP15.92■□□□□ 0.14
SSH3-206ENST00000529224 ADGRA1Q86SQ6 560 aa15.92■□□□□ 0.14
SSH3-206ENST00000529224 MAGEB6Q8N7X4 407 aa15.92■□□□□ 0.14
SSH3-206ENST00000529224 YTHDC1Q96MU7 727 aaKnown RBP15.92■□□□□ 0.14
SSH3-206ENST00000529224 BCL11AQ9H165 835 aa15.92■□□□□ 0.14
SSH3-206ENST00000529224 DHX36Q9H2U1 1008 aaKnown RBP15.92■□□□□ 0.14
SSH3-206ENST00000529224 ZFYVE28Q9HCC9 887 aa15.92■□□□□ 0.14
SSH3-206ENST00000529224 KCNH4Q9UQ05 1017 aa15.92■□□□□ 0.14
SSH3-206ENST00000529224 NDUFB9Q9Y6M9 179 aa15.92■□□□□ 0.14
SSH3-206ENST00000529224 BTBD19C9JJ37 291 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms