RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 COL9A3Q14050 684 aaPredicted RBP29.44■■■□□ 2.3
LDLRAD3-203ENST00000528989 ADCK5Q3MIX3 580 aa29.44■■■□□ 2.3
LDLRAD3-203ENST00000528989 GIMAP6Q6P9H5 292 aa29.44■■■□□ 2.3
LDLRAD3-203ENST00000528989 STK11IPQ8N1F8 1099 aa29.44■■■□□ 2.3
LDLRAD3-203ENST00000528989 NBPF3Q9H094 633 aa29.44■■■□□ 2.3
LDLRAD3-203ENST00000528989 RBM19Q9Y4C8 960 aaKnown RBP29.44■■■□□ 2.3
LDLRAD3-203ENST00000528989 GLTPD2A6NH11 291 aa29.44■■■□□ 2.3
LDLRAD3-203ENST00000528989 ZNF213O14771 459 aa29.44■■■□□ 2.3
LDLRAD3-203ENST00000528989 TCP10Q12799 353 aa29.44■■■□□ 2.3
LDLRAD3-203ENST00000528989 IMMTQ16891 758 aaKnown RBP29.44■■■□□ 2.3
LDLRAD3-203ENST00000528989 INCENPQ9NQS7 918 aa29.44■■■□□ 2.3
LDLRAD3-203ENST00000528989 ZNF70Q9UC06 446 aaPredicted RBP29.44■■■□□ 2.3
LDLRAD3-203ENST00000528989 FAM198AQ9UFP1 575 aa29.44■■■□□ 2.3
LDLRAD3-203ENST00000528989 SCAF8Q9UPN6 1271 aaKnown RBP29.44■■■□□ 2.3
LDLRAD3-203ENST00000528989 ASTN2O75129 1339 aaPredicted RBP29.43■■■□□ 2.3
LDLRAD3-203ENST00000528989 RNF20Q5VTR2 975 aa29.43■■■□□ 2.3
LDLRAD3-203ENST00000528989 TRPM4Q8TD43 1214 aa29.43■■■□□ 2.3
LDLRAD3-203ENST00000528989 DCAF8L1A6NGE4 600 aa29.42■■■□□ 2.3
LDLRAD3-203ENST00000528989 CTDSPL2Q05D32 466 aa29.42■■■□□ 2.3
LDLRAD3-203ENST00000528989 KIF4BQ2VIQ3 1234 aa29.42■■■□□ 2.3
LDLRAD3-203ENST00000528989 ZMYM6O95789 1325 aa29.42■■■□□ 2.3
LDLRAD3-203ENST00000528989 ZKSCAN1P17029 563 aaPredicted RBP29.42■■■□□ 2.3
LDLRAD3-203ENST00000528989 MMP14P50281 582 aa29.42■■■□□ 2.3
LDLRAD3-203ENST00000528989 STOX1Q6ZVD7 989 aa29.42■■■□□ 2.3
LDLRAD3-203ENST00000528989 DDRGK1Q96HY6 314 aa29.42■■■□□ 2.3
LDLRAD3-203ENST00000528989 TACC3Q9Y6A5 838 aa29.42■■■□□ 2.3
LDLRAD3-203ENST00000528989 ZC3H4Q9UPT8 1303 aaKnown RBP29.41■■■□□ 2.3
LDLRAD3-203ENST00000528989 BAZ2AQ9UIF9 1905 aaKnown RBP29.41■■■□□ 2.3
LDLRAD3-203ENST00000528989 TCP10L2B9ZVM9 353 aa29.41■■■□□ 2.3
LDLRAD3-203ENST00000528989 SPDYE2Q495Y8 402 aa29.41■■■□□ 2.3
LDLRAD3-203ENST00000528989 IDI2Q9BXS1 227 aa29.41■■■□□ 2.3
LDLRAD3-203ENST00000528989 PLCD1P51178 756 aa29.4■■■□□ 2.3
LDLRAD3-203ENST00000528989 HIRAP54198 1017 aaPredicted RBP29.4■■■□□ 2.3
LDLRAD3-203ENST00000528989 TBC1D10CQ8IV04 446 aa29.4■■■□□ 2.3
LDLRAD3-203ENST00000528989 VEZTQ9HBM0 779 aa29.4■■■□□ 2.3
LDLRAD3-203ENST00000528989 ANAPC15P60006 121 aa29.4■■■□□ 2.3
LDLRAD3-203ENST00000528989 PPARAQ07869 468 aa29.4■■■□□ 2.3
LDLRAD3-203ENST00000528989 TSGA10IPQ3SY00 556 aa29.39■■■□□ 2.3
LDLRAD3-203ENST00000528989 OSBPL5Q9H0X9 879 aaPredicted RBP29.39■■■□□ 2.3
LDLRAD3-203ENST00000528989 MYO1BO43795 1136 aa29.38■■■□□ 2.29
LDLRAD3-203ENST00000528989 CPA1P15085 419 aa29.38■■■□□ 2.29
LDLRAD3-203ENST00000528989 LMOD1P29536 600 aaPredicted RBP29.38■■■□□ 2.29
LDLRAD3-203ENST00000528989 NKX2-3Q8TAU0 364 aa29.38■■■□□ 2.29
LDLRAD3-203ENST00000528989 L3MBTL3Q96JM7 780 aaPredicted RBP29.38■■■□□ 2.29
LDLRAD3-203ENST00000528989 CDK5RAP2Q96SN8 1893 aa29.38■■■□□ 2.29
LDLRAD3-203ENST00000528989 E7EWF7 191 aa29.38■■■□□ 2.29
LDLRAD3-203ENST00000528989 POLR3DP05423 398 aaPredicted RBP29.38■■■□□ 2.29
LDLRAD3-203ENST00000528989 SBK1Q52WX2 424 aa29.38■■■□□ 2.29
LDLRAD3-203ENST00000528989 C12orf60Q5U649 245 aa29.38■■■□□ 2.29
LDLRAD3-203ENST00000528989 JAKMIP1Q96N16 626 aaKnown RBP29.37■■■□□ 2.29
LDLRAD3-203ENST00000528989 UPF3BQ9BZI7 483 aaKnown RBP29.37■■■□□ 2.29
LDLRAD3-203ENST00000528989 ARPP21Q9UBL0 812 aaPredicted RBP29.37■■■□□ 2.29
LDLRAD3-203ENST00000528989 TMOD2Q9NZR1 351 aa29.36■■■□□ 2.29
LDLRAD3-203ENST00000528989 SH3BP5LQ7L8J4 393 aa29.36■■■□□ 2.29
LDLRAD3-203ENST00000528989 IL17RAQ96F46 866 aa29.36■■■□□ 2.29
LDLRAD3-203ENST00000528989 DYNLL2Q96FJ2 89 aa29.36■■■□□ 2.29
LDLRAD3-203ENST00000528989 DDTLA6NHG4 134 aaPredicted RBP29.35■■■□□ 2.29
LDLRAD3-203ENST00000528989 POTECB2RU33 542 aa29.35■■■□□ 2.29
LDLRAD3-203ENST00000528989 SLURP2P0DP57 97 aa29.35■■■□□ 2.29
LDLRAD3-203ENST00000528989 ADARB2Q9NS39 739 aaKnown RBP29.35■■■□□ 2.29
LDLRAD3-203ENST00000528989 HACL1Q9UJ83 578 aa29.35■■■□□ 2.29
LDLRAD3-203ENST00000528989 ANAPC4Q9UJX5 808 aa29.35■■■□□ 2.29
LDLRAD3-203ENST00000528989 CASTP20810 708 aaKnown RBP29.34■■■□□ 2.29
LDLRAD3-203ENST00000528989 CNTNAP1P78357 1384 aa29.33■■■□□ 2.29
LDLRAD3-203ENST00000528989 ECM29Q5VYK3 1845 aa29.33■■■□□ 2.29
LDLRAD3-203ENST00000528989 AKNAD1Q5T1N1 836 aa29.33■■■□□ 2.29
LDLRAD3-203ENST00000528989 NEDD4P46934 1319 aa29.33■■■□□ 2.29
LDLRAD3-203ENST00000528989 NPM3O75607 178 aaKnown RBP29.32■■■□□ 2.28
LDLRAD3-203ENST00000528989 PRDM1O75626 825 aa29.32■■■□□ 2.28
LDLRAD3-203ENST00000528989 ANGEL2Q5VTE6 544 aaKnown RBP29.32■■■□□ 2.28
LDLRAD3-203ENST00000528989 ZSCAN29Q8IWY8 852 aaPredicted RBP29.32■■■□□ 2.28
LDLRAD3-203ENST00000528989 CDAN1Q8IWY9 1227 aa29.32■■■□□ 2.28
LDLRAD3-203ENST00000528989 NEK1Q96PY6 1258 aa29.32■■■□□ 2.28
LDLRAD3-203ENST00000528989 TMEM39BQ9GZU3 492 aa29.32■■■□□ 2.28
LDLRAD3-203ENST00000528989 ENTPD3O75355 529 aa29.31■■■□□ 2.28
LDLRAD3-203ENST00000528989 SLC44A5Q8NCS7 719 aa29.31■■■□□ 2.28
LDLRAD3-203ENST00000528989 FOCADQ5VW36 1801 aa29.31■■■□□ 2.28
LDLRAD3-203ENST00000528989 EPHX2P34913 555 aa29.31■■■□□ 2.28
LDLRAD3-203ENST00000528989 KRT32Q14532 448 aa29.31■■■□□ 2.28
LDLRAD3-203ENST00000528989 MFSD6Q6ZSS7 791 aa29.31■■■□□ 2.28
LDLRAD3-203ENST00000528989 AMOTL1Q8IY63 956 aa29.31■■■□□ 2.28
LDLRAD3-203ENST00000528989 STAG1Q8WVM7 1258 aa29.31■■■□□ 2.28
LDLRAD3-203ENST00000528989 TCEANC2Q96MN5 208 aa29.31■■■□□ 2.28
LDLRAD3-203ENST00000528989 NEK4P51957 841 aa29.3■■■□□ 2.28
LDLRAD3-203ENST00000528989 FKBP1CQ5VVH2 108 aa29.3■■■□□ 2.28
LDLRAD3-203ENST00000528989 CHST3Q7LGC8 479 aa29.3■■■□□ 2.28
LDLRAD3-203ENST00000528989 ZSWIM6Q9HCJ5 1215 aa29.3■■■□□ 2.28
LDLRAD3-203ENST00000528989 NAV1Q8NEY1 1877 aa29.3■■■□□ 2.28
LDLRAD3-203ENST00000528989 RRP12Q5JTH9 1297 aaKnown RBP29.29■■■□□ 2.28
LDLRAD3-203ENST00000528989 FAM151AQ8WW52 585 aa29.29■■■□□ 2.28
LDLRAD3-203ENST00000528989 TOMM22Q9NS69 142 aa29.29■■■□□ 2.28
LDLRAD3-203ENST00000528989 GGA3Q9NZ52 723 aa29.29■■■□□ 2.28
LDLRAD3-203ENST00000528989 B4E1Z4 1266 aa29.29■■■□□ 2.28
LDLRAD3-203ENST00000528989 RASA3Q14644 834 aa29.29■■■□□ 2.28
LDLRAD3-203ENST00000528989 TTC6Q86TZ1 520 aa29.29■■■□□ 2.28
LDLRAD3-203ENST00000528989 DDX60LQ5H9U9 1706 aaKnown RBP29.28■■■□□ 2.28
LDLRAD3-203ENST00000528989 RABEP1Q15276 862 aa29.28■■■□□ 2.28
LDLRAD3-203ENST00000528989 TM6SF1Q9BZW5 370 aa29.28■■■□□ 2.28
LDLRAD3-203ENST00000528989 MYH1P12882 1939 aa29.28■■■□□ 2.28
LDLRAD3-203ENST00000528989 CD2BP2O95400 341 aaKnown RBP29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms