RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 MROH7-TTC4A0A0A0MT08 1334 aa9.66□□□□□ -0.86
CSTF3-208ENST00000528865 GOLGA8AA7E2F4 631 aa9.66□□□□□ -0.86
CSTF3-208ENST00000528865 GSG1L2A8MUP6 293 aa9.66□□□□□ -0.86
CSTF3-208ENST00000528865 CCP110O43303 1012 aa9.66□□□□□ -0.86
CSTF3-208ENST00000528865 IDH1O75874 414 aaKnown RBP9.66□□□□□ -0.86
CSTF3-208ENST00000528865 APPP05067 770 aa9.66□□□□□ -0.86
CSTF3-208ENST00000528865 SLC5A1P13866 664 aa9.66□□□□□ -0.86
CSTF3-208ENST00000528865 PTPREP23469 700 aa9.66□□□□□ -0.86
CSTF3-208ENST00000528865 MARCKSP29966 332 aaPredicted RBP9.66□□□□□ -0.86
CSTF3-208ENST00000528865 SARSP49591 514 aaKnown RBP9.66□□□□□ -0.86
CSTF3-208ENST00000528865 DMTNQ08495 405 aa9.66□□□□□ -0.86
CSTF3-208ENST00000528865 MAP3K12Q12852 859 aa9.66□□□□□ -0.86
CSTF3-208ENST00000528865 TMEM67Q5HYA8 995 aa9.66□□□□□ -0.86
CSTF3-208ENST00000528865 CT47A1Q5JQC4 288 aaPredicted RBP9.66□□□□□ -0.86
CSTF3-208ENST00000528865 AKNAD1Q5T1N1 836 aa9.66□□□□□ -0.86
CSTF3-208ENST00000528865 NT5DC1Q5TFE4 455 aa9.66□□□□□ -0.86
CSTF3-208ENST00000528865 TMC6Q7Z403 805 aa9.66□□□□□ -0.86
CSTF3-208ENST00000528865 FCHSD1Q86WN1 690 aa9.66□□□□□ -0.86
CSTF3-208ENST00000528865 FOXP4Q8IVH2 680 aaPredicted RBP9.66□□□□□ -0.86
CSTF3-208ENST00000528865 TMTC2Q8N394 836 aa9.66□□□□□ -0.86
CSTF3-208ENST00000528865 SPATA5Q8NB90 893 aa9.66□□□□□ -0.86
CSTF3-208ENST00000528865 AIDAQ96BJ3 306 aa9.66□□□□□ -0.86
CSTF3-208ENST00000528865 FOXP1Q9H334 677 aaPredicted RBP9.66□□□□□ -0.86
CSTF3-208ENST00000528865 DDX41Q9UJV9 622 aaKnown RBP9.66□□□□□ -0.86
CSTF3-208ENST00000528865 ABCA3Q99758 1704 aa9.65□□□□□ -0.86
CSTF3-208ENST00000528865 UBN2Q6ZU65 1347 aa9.65□□□□□ -0.86
CSTF3-208ENST00000528865 BIN1O00499 593 aa9.65□□□□□ -0.86
CSTF3-208ENST00000528865 IFIT3O14879 490 aaKnown RBP9.65□□□□□ -0.86
CSTF3-208ENST00000528865 NRDCO43847 1150 aa9.65□□□□□ -0.86
CSTF3-208ENST00000528865 SMC2O95347 1197 aa9.65□□□□□ -0.86
CSTF3-208ENST00000528865 SLU7O95391 586 aaKnown RBP9.65□□□□□ -0.86
CSTF3-208ENST00000528865 SFPQP23246 707 aaKnown RBP eCLIP9.65□□□□□ -0.86
CSTF3-208ENST00000528865 TOB1P50616 345 aaPredicted RBP9.65□□□□□ -0.86
CSTF3-208ENST00000528865 EIF5P55010 431 aaKnown RBP9.65□□□□□ -0.86
CSTF3-208ENST00000528865 CBX1P83916 185 aa9.65□□□□□ -0.86
CSTF3-208ENST00000528865 MYL5Q02045 173 aa9.65□□□□□ -0.86
CSTF3-208ENST00000528865 TRIM29Q14134 588 aa9.65□□□□□ -0.86
CSTF3-208ENST00000528865 PPP2R5BQ15173 497 aa9.65□□□□□ -0.86
CSTF3-208ENST00000528865 LONRF3Q496Y0 759 aa9.65□□□□□ -0.86
CSTF3-208ENST00000528865 OLFM4Q6UX06 510 aa9.65□□□□□ -0.86
CSTF3-208ENST00000528865 METTL16Q86W50 562 aaKnown RBP9.65□□□□□ -0.86
CSTF3-208ENST00000528865 VSTM4Q8IW00 320 aa9.65□□□□□ -0.86
CSTF3-208ENST00000528865 STK11IPQ8N1F8 1099 aa9.65□□□□□ -0.86
CSTF3-208ENST00000528865 KRI1Q8N9T8 703 aaKnown RBP9.65□□□□□ -0.86
CSTF3-208ENST00000528865 ZNF397Q8NF99 534 aaPredicted RBP9.65□□□□□ -0.86
CSTF3-208ENST00000528865 PHKBQ93100 1093 aa9.65□□□□□ -0.86
CSTF3-208ENST00000528865 PPP1R13BQ96KQ4 1090 aa9.65□□□□□ -0.86
CSTF3-208ENST00000528865 ZNF215Q9UL58 517 aaPredicted RBP9.65□□□□□ -0.86
CSTF3-208ENST00000528865 KCNH3Q9ULD8 1083 aa9.65□□□□□ -0.86
CSTF3-208ENST00000528865 ZBTB1Q9Y2K1 713 aa9.65□□□□□ -0.86
CSTF3-208ENST00000528865 ZNF330Q9Y3S2 320 aaPredicted RBP9.65□□□□□ -0.86
CSTF3-208ENST00000528865 SLC12A7Q9Y666 1083 aa9.65□□□□□ -0.86
CSTF3-208ENST00000528865 MBD4O95243 580 aa9.64□□□□□ -0.87
CSTF3-208ENST00000528865 MMP1P03956 469 aa9.64□□□□□ -0.87
CSTF3-208ENST00000528865 UBASH3AP57075 661 aa9.64□□□□□ -0.87
CSTF3-208ENST00000528865 TBX2Q13207 712 aaPredicted RBP9.64□□□□□ -0.87
CSTF3-208ENST00000528865 NAA30Q147X3 362 aaPredicted RBP9.64□□□□□ -0.87
CSTF3-208ENST00000528865 RILPL1Q5EBL4 403 aa9.64□□□□□ -0.87
CSTF3-208ENST00000528865 NFXL1Q6ZNB6 911 aa9.64□□□□□ -0.87
CSTF3-208ENST00000528865 MFSD6Q6ZSS7 791 aa9.64□□□□□ -0.87
CSTF3-208ENST00000528865 MICU3Q86XE3 530 aa9.64□□□□□ -0.87
CSTF3-208ENST00000528865 DZIP3Q86Y13 1208 aaKnown RBP9.64□□□□□ -0.87
CSTF3-208ENST00000528865 NOSTRINQ8IVI9 506 aa9.64□□□□□ -0.87
CSTF3-208ENST00000528865 CRACR2BQ8N4Y2 399 aaPredicted RBP9.64□□□□□ -0.87
CSTF3-208ENST00000528865 MAGEB6Q8N7X4 407 aa9.64□□□□□ -0.87
CSTF3-208ENST00000528865 TRIML1Q8N9V2 468 aa9.64□□□□□ -0.87
CSTF3-208ENST00000528865 DPF2Q92785 391 aa9.64□□□□□ -0.87
CSTF3-208ENST00000528865 FBXW7Q969H0 707 aa9.64□□□□□ -0.87
CSTF3-208ENST00000528865 CLIC6Q96NY7 704 aa9.64□□□□□ -0.87
CSTF3-208ENST00000528865 BCL11BQ9C0K0 894 aaPredicted RBP9.64□□□□□ -0.87
CSTF3-208ENST00000528865 NAPBQ9H115 298 aa9.64□□□□□ -0.87
CSTF3-208ENST00000528865 TRMT1Q9NXH9 659 aaKnown RBP9.64□□□□□ -0.87
CSTF3-208ENST00000528865 ANAPC4Q9UJX5 808 aa9.64□□□□□ -0.87
CSTF3-208ENST00000528865 FBXO2Q9UK22 296 aaPredicted RBP9.64□□□□□ -0.87
CSTF3-208ENST00000528865 PCDHA5Q9Y5H7 936 aa9.64□□□□□ -0.87
CSTF3-208ENST00000528865 ANKRD36CQ5JPF3 1778 aa9.64□□□□□ -0.87
CSTF3-208ENST00000528865 TIAM2Q8IVF5 1701 aa9.64□□□□□ -0.87
CSTF3-208ENST00000528865 ARAP2Q8WZ64 1704 aa9.64□□□□□ -0.87
CSTF3-208ENST00000528865 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.63□□□□□ -0.87
CSTF3-208ENST00000528865 CCDC196A0A1B0GTZ2 297 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 DEXIO95424 95 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 ATP1A3P13637 1013 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 RXRAP19793 462 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 BMP6P22004 513 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 LMOD1P29536 600 aaPredicted RBP9.63□□□□□ -0.87
CSTF3-208ENST00000528865 CTDSPL2Q05D32 466 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 PNOCQ13519 176 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 RASGRF1Q13972 1273 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 MORC3Q14149 939 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 SAFBQ15424 915 aaKnown RBP eCLIP9.63□□□□□ -0.87
CSTF3-208ENST00000528865 RTN1Q16799 776 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 PARP10Q53GL7 1025 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 SUSD4Q5VX71 490 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 KANK3Q6NY19 840 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 INTS5Q6P9B9 1019 aaKnown RBP9.63□□□□□ -0.87
CSTF3-208ENST00000528865 MLKLQ8NB16 471 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 CNNM3Q8NE01 707 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 SPATA20Q8TB22 786 aa9.63□□□□□ -0.87
CSTF3-208ENST00000528865 ENOX1Q8TC92 643 aaKnown RBP9.63□□□□□ -0.87
CSTF3-208ENST00000528865 ZNF592Q92610 1267 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms