RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 ESYT1Q9BSJ8 1104 aa9.45□□□□□ -0.9
SSBP3-211ENST00000528787 PUS7LQ9H0K6 701 aaKnown RBP9.45□□□□□ -0.9
SSBP3-211ENST00000528787 TDRD3Q9H7E2 651 aaKnown RBP9.45□□□□□ -0.9
SSBP3-211ENST00000528787 ANO2Q9NQ90 1003 aa9.45□□□□□ -0.9
SSBP3-211ENST00000528787 GINM1Q9NU53 330 aa9.45□□□□□ -0.9
SSBP3-211ENST00000528787 GGA3Q9NZ52 723 aa9.45□□□□□ -0.9
SSBP3-211ENST00000528787 SWAP70Q9UH65 585 aa9.45□□□□□ -0.9
SSBP3-211ENST00000528787 HERC5Q9UII4 1024 aaKnown RBP9.45□□□□□ -0.9
SSBP3-211ENST00000528787 CDK5RAP2Q96SN8 1893 aa9.45□□□□□ -0.9
SSBP3-211ENST00000528787 ZNF213O14771 459 aa9.44□□□□□ -0.9
SSBP3-211ENST00000528787 TOMM70O94826 608 aa9.44□□□□□ -0.9
SSBP3-211ENST00000528787 TRDNQ13061 729 aa9.44□□□□□ -0.9
SSBP3-211ENST00000528787 SBK1Q52WX2 424 aa9.44□□□□□ -0.9
SSBP3-211ENST00000528787 CCDC178Q5BJE1 867 aa9.44□□□□□ -0.9
SSBP3-211ENST00000528787 ANGEL2Q5VTE6 544 aaKnown RBP9.44□□□□□ -0.9
SSBP3-211ENST00000528787 CHADLQ6NUI6 762 aa9.44□□□□□ -0.9
SSBP3-211ENST00000528787 KRT26Q7Z3Y9 468 aa9.44□□□□□ -0.9
SSBP3-211ENST00000528787 CRACR2BQ8N4Y2 399 aaPredicted RBP9.44□□□□□ -0.9
SSBP3-211ENST00000528787 RBM46Q8TBY0 533 aaKnown RBP9.44□□□□□ -0.9
SSBP3-211ENST00000528787 SH3RF3Q8TEJ3 882 aaPredicted RBP9.44□□□□□ -0.9
SSBP3-211ENST00000528787 TGFBRAP1Q8WUH2 860 aa9.44□□□□□ -0.9
SSBP3-211ENST00000528787 OSBPL5Q9H0X9 879 aaPredicted RBP9.44□□□□□ -0.9
SSBP3-211ENST00000528787 DEFB129Q9H1M3 183 aa9.44□□□□□ -0.9
SSBP3-211ENST00000528787 EHD4Q9H223 541 aa9.44□□□□□ -0.9
SSBP3-211ENST00000528787 CNNM2Q9H8M5 875 aa9.44□□□□□ -0.9
SSBP3-211ENST00000528787 ARMT1Q9H993 441 aa9.44□□□□□ -0.9
SSBP3-211ENST00000528787 LAMB1P07942 1786 aa9.44□□□□□ -0.9
SSBP3-211ENST00000528787 MYH8P13535 1937 aa9.44□□□□□ -0.9
SSBP3-211ENST00000528787 POLR2AP24928 1970 aaKnown RBP9.43□□□□□ -0.9
SSBP3-211ENST00000528787 ATRNL1Q5VV63 1379 aa9.43□□□□□ -0.9
SSBP3-211ENST00000528787 FLT1P17948 1338 aa9.43□□□□□ -0.9
SSBP3-211ENST00000528787 A0A0D9SFI3 127 aa9.43□□□□□ -0.9
SSBP3-211ENST00000528787 TBC1D12O60347 775 aa9.43□□□□□ -0.9
SSBP3-211ENST00000528787 HMGB1P09429 215 aaKnown RBP9.43□□□□□ -0.9
SSBP3-211ENST00000528787 HSPD1P10809 573 aaKnown RBP9.43□□□□□ -0.9
SSBP3-211ENST00000528787 RHBDL3P58872 404 aa9.43□□□□□ -0.9
SSBP3-211ENST00000528787 PICALMQ13492 652 aa9.43□□□□□ -0.9
SSBP3-211ENST00000528787 NBPF9Q3BBW0 867 aa9.43□□□□□ -0.9
SSBP3-211ENST00000528787 IFNL3Q8IZI9 196 aa9.43□□□□□ -0.9
SSBP3-211ENST00000528787 LCORLQ8N3X6 602 aa9.43□□□□□ -0.9
SSBP3-211ENST00000528787 ZNF526Q8TF50 670 aaPredicted RBP9.43□□□□□ -0.9
SSBP3-211ENST00000528787 CCDC17Q96LX7 622 aa9.43□□□□□ -0.9
SSBP3-211ENST00000528787 FAM227BQ96M60 508 aa9.43□□□□□ -0.9
SSBP3-211ENST00000528787 CSRNP1Q96S65 589 aa9.43□□□□□ -0.9
SSBP3-211ENST00000528787 TBC1D2Q9BYX2 928 aa9.43□□□□□ -0.9
SSBP3-211ENST00000528787 MCM9Q9NXL9 1143 aa9.43□□□□□ -0.9
SSBP3-211ENST00000528787 SERPINB13Q9UIV8 391 aa9.43□□□□□ -0.9
SSBP3-211ENST00000528787 UTRNP46939 3433 aa9.43□□□□□ -0.9
SSBP3-211ENST00000528787 CLRN2A0PK11 232 aa9.42□□□□□ -0.9
SSBP3-211ENST00000528787 TCP10L2B9ZVM9 353 aa9.42□□□□□ -0.9
SSBP3-211ENST00000528787 M0R2C6 588 aa9.42□□□□□ -0.9
SSBP3-211ENST00000528787 WDHD1O75717 1129 aaPredicted RBP9.42□□□□□ -0.9
SSBP3-211ENST00000528787 IREB2P48200 963 aaKnown RBP9.42□□□□□ -0.9
SSBP3-211ENST00000528787 RASA3Q14644 834 aa9.42□□□□□ -0.9
SSBP3-211ENST00000528787 GRIK5Q16478 980 aa9.42□□□□□ -0.9
SSBP3-211ENST00000528787 ARMC9Q7Z3E5 817 aa9.42□□□□□ -0.9
SSBP3-211ENST00000528787 ADGRA1Q86SQ6 560 aa9.42□□□□□ -0.9
SSBP3-211ENST00000528787 TRPM4Q8TD43 1214 aa9.42□□□□□ -0.9
SSBP3-211ENST00000528787 ZNF384Q8TF68 577 aa9.42□□□□□ -0.9
SSBP3-211ENST00000528787 KRT23Q9C075 422 aa9.42□□□□□ -0.9
SSBP3-211ENST00000528787 DCP1AQ9NPI6 582 aaPredicted RBP9.42□□□□□ -0.9
SSBP3-211ENST00000528787 TRPM7Q96QT4 1865 aa9.42□□□□□ -0.9
SSBP3-211ENST00000528787 ADAMTSL1Q8N6G6 1762 aa9.42□□□□□ -0.9
SSBP3-211ENST00000528787 BAZ2AQ9UIF9 1905 aaKnown RBP9.41□□□□□ -0.9
SSBP3-211ENST00000528787 LAMA4Q16363 1823 aa9.41□□□□□ -0.9
SSBP3-211ENST00000528787 GSG1L2A8MUP6 293 aa9.41□□□□□ -0.9
SSBP3-211ENST00000528787 POTECB2RU33 542 aa9.41□□□□□ -0.9
SSBP3-211ENST00000528787 PSMA5P28066 241 aa9.41□□□□□ -0.9
SSBP3-211ENST00000528787 ANAPC15P60006 121 aa9.41□□□□□ -0.9
SSBP3-211ENST00000528787 DYNLL1P63167 89 aaKnown RBP9.41□□□□□ -0.9
SSBP3-211ENST00000528787 SART3Q15020 963 aaKnown RBP9.41□□□□□ -0.9
SSBP3-211ENST00000528787 MFSD6Q6ZSS7 791 aa9.41□□□□□ -0.9
SSBP3-211ENST00000528787 MAPKAPK5Q8IW41 473 aa9.41□□□□□ -0.9
SSBP3-211ENST00000528787 C2orf69Q8N8R5 385 aa9.41□□□□□ -0.9
SSBP3-211ENST00000528787 MAP4K1Q92918 833 aa9.41□□□□□ -0.9
SSBP3-211ENST00000528787 ZNF341Q9BYN7 854 aa9.41□□□□□ -0.9
SSBP3-211ENST00000528787 MKNK2Q9HBH9 465 aa9.41□□□□□ -0.9
SSBP3-211ENST00000528787 NMRK2Q9NPI5 230 aa9.41□□□□□ -0.9
SSBP3-211ENST00000528787 ANAPC4Q9UJX5 808 aa9.41□□□□□ -0.9
SSBP3-211ENST00000528787 USP17L12C9JPN9 530 aa9.4□□□□□ -0.9
SSBP3-211ENST00000528787 USP17L21D6R901 530 aa9.4□□□□□ -0.9
SSBP3-211ENST00000528787 FGAP02671 866 aa9.4□□□□□ -0.9
SSBP3-211ENST00000528787 HIRAP54198 1017 aaPredicted RBP9.4□□□□□ -0.9
SSBP3-211ENST00000528787 PPARAQ07869 468 aa9.4□□□□□ -0.9
SSBP3-211ENST00000528787 TCP10Q12799 353 aa9.4□□□□□ -0.9
SSBP3-211ENST00000528787 C12orf60Q5U649 245 aa9.4□□□□□ -0.9
SSBP3-211ENST00000528787 RALYLQ86SE5 291 aaKnown RBP9.4□□□□□ -0.9
SSBP3-211ENST00000528787 USP48Q86UV5 1035 aa9.4□□□□□ -0.9
SSBP3-211ENST00000528787 ZNF444Q8N0Y2 327 aaPredicted RBP9.4□□□□□ -0.9
SSBP3-211ENST00000528787 ZNF784Q8NCA9 323 aaPredicted RBP9.4□□□□□ -0.9
SSBP3-211ENST00000528787 SDR42E1Q8WUS8 393 aa9.4□□□□□ -0.9
SSBP3-211ENST00000528787 CHMP4CQ96CF2 233 aa9.4□□□□□ -0.9
SSBP3-211ENST00000528787 SEC62Q99442 399 aaKnown RBP9.4□□□□□ -0.9
SSBP3-211ENST00000528787 MTA3Q9BTC8 594 aa9.4□□□□□ -0.9
SSBP3-211ENST00000528787 CABP5Q9NP86 173 aa9.4□□□□□ -0.9
SSBP3-211ENST00000528787 CSADQ9Y600 493 aa9.4□□□□□ -0.9
SSBP3-211ENST00000528787 ROBO3Q96MS0 1386 aa9.39□□□□□ -0.91
SSBP3-211ENST00000528787 ERICH2A1L162 156 aa9.39□□□□□ -0.91
SSBP3-211ENST00000528787 MINDY4BA8MYZ0 360 aa9.39□□□□□ -0.91
SSBP3-211ENST00000528787 ASNSP08243 561 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms