RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 CYP11A1P05108 521 aa5.05□□□□□ -1.6
BRCA2-203ENST00000528762 LIG1P18858 919 aa5.05□□□□□ -1.6
BRCA2-203ENST00000528762 ZNF76P36508 570 aa5.05□□□□□ -1.6
BRCA2-203ENST00000528762 ASPAP45381 313 aa5.05□□□□□ -1.6
BRCA2-203ENST00000528762 FANCCQ00597 558 aa5.05□□□□□ -1.6
BRCA2-203ENST00000528762 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.05□□□□□ -1.6
BRCA2-203ENST00000528762 CCDC74AQ96AQ1 378 aa5.05□□□□□ -1.6
BRCA2-203ENST00000528762 YIPF2Q9BWQ6 316 aa5.05□□□□□ -1.6
BRCA2-203ENST00000528762 PPP1R1BQ9UD71 204 aaPredicted RBP5.05□□□□□ -1.6
BRCA2-203ENST00000528762 B3GALT4O96024 378 aa5.04□□□□□ -1.6
BRCA2-203ENST00000528762 FAAP100Q0VG06 881 aa5.04□□□□□ -1.6
BRCA2-203ENST00000528762 PI16Q6UXB8 463 aa5.04□□□□□ -1.6
BRCA2-203ENST00000528762 ZNF574Q6ZN55 896 aaPredicted RBP5.04□□□□□ -1.6
BRCA2-203ENST00000528762 FLCNQ8NFG4 579 aa5.04□□□□□ -1.6
BRCA2-203ENST00000528762 EPS8L3Q8TE67 593 aaKnown RBP5.04□□□□□ -1.6
BRCA2-203ENST00000528762 EZH1Q92800 747 aaPredicted RBP5.04□□□□□ -1.6
BRCA2-203ENST00000528762 FMNL2Q96PY5 1086 aa5.04□□□□□ -1.6
BRCA2-203ENST00000528762 TINF2Q9BSI4 451 aa5.04□□□□□ -1.6
BRCA2-203ENST00000528762 WDR18Q9BV38 432 aa5.04□□□□□ -1.6
BRCA2-203ENST00000528762 ACSS3Q9H6R3 686 aa5.04□□□□□ -1.6
BRCA2-203ENST00000528762 ABCB6Q9NP58 842 aa5.04□□□□□ -1.6
BRCA2-203ENST00000528762 PPP4R2Q9NY27 417 aa5.04□□□□□ -1.6
BRCA2-203ENST00000528762 ZC3H7BQ9UGR2 993 aaKnown RBP5.04□□□□□ -1.6
BRCA2-203ENST00000528762 PPP1R9AQ9ULJ8 1098 aa5.04□□□□□ -1.6
BRCA2-203ENST00000528762 AOC2O75106 756 aa5.03□□□□□ -1.6
BRCA2-203ENST00000528762 CTSHP09668 335 aa5.03□□□□□ -1.6
BRCA2-203ENST00000528762 TXKP42681 527 aa5.03□□□□□ -1.6
BRCA2-203ENST00000528762 CDK5R2Q13319 367 aa5.03□□□□□ -1.6
BRCA2-203ENST00000528762 SF3A1Q15459 793 aaKnown RBP5.03□□□□□ -1.6
BRCA2-203ENST00000528762 KIAA0319Q5VV43 1072 aa5.03□□□□□ -1.6
BRCA2-203ENST00000528762 VSIG10LQ86VR7 867 aa5.03□□□□□ -1.6
BRCA2-203ENST00000528762 METTL22Q9BUU2 404 aaPredicted RBP5.03□□□□□ -1.6
BRCA2-203ENST00000528762 OSBPL7Q9BZF2 842 aa5.03□□□□□ -1.6
BRCA2-203ENST00000528762 TGIF2Q9GZN2 237 aa5.03□□□□□ -1.6
BRCA2-203ENST00000528762 CCDC86Q9H6F5 360 aaKnown RBP5.03□□□□□ -1.6
BRCA2-203ENST00000528762 USP31Q70CQ4 1352 aa5.03□□□□□ -1.6
BRCA2-203ENST00000528762 MAP7Q14244 749 aa5.02□□□□□ -1.61
BRCA2-203ENST00000528762 GRM2Q14416 872 aa5.02□□□□□ -1.61
BRCA2-203ENST00000528762 TAF1CQ15572 869 aaPredicted RBP5.02□□□□□ -1.61
BRCA2-203ENST00000528762 DUSP27Q5VZP5 1158 aa5.02□□□□□ -1.61
BRCA2-203ENST00000528762 FAM181AQ8N9Y4 354 aa5.02□□□□□ -1.61
BRCA2-203ENST00000528762 SLC43A3Q8NBI5 491 aa5.02□□□□□ -1.61
BRCA2-203ENST00000528762 C12orf49Q9H741 205 aa5.02□□□□□ -1.61
BRCA2-203ENST00000528762 CAPN10Q9HC96 672 aa5.02□□□□□ -1.61
BRCA2-203ENST00000528762 C1GALT1Q9NS00 363 aa5.02□□□□□ -1.61
BRCA2-203ENST00000528762 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.02□□□□□ -1.61
BRCA2-203ENST00000528762 U3KQE9 123 aa5.02□□□□□ -1.61
BRCA2-203ENST00000528762 TMPRSS2O15393 492 aa5.01□□□□□ -1.61
BRCA2-203ENST00000528762 ITPKAP23677 461 aa5.01□□□□□ -1.61
BRCA2-203ENST00000528762 CD96P40200 585 aa5.01□□□□□ -1.61
BRCA2-203ENST00000528762 FCGRTP55899 365 aa5.01□□□□□ -1.61
BRCA2-203ENST00000528762 BNIP3Q12983 259 aa5.01□□□□□ -1.61
BRCA2-203ENST00000528762 GNL2Q13823 731 aaKnown RBP5.01□□□□□ -1.61
BRCA2-203ENST00000528762 UBXN4Q92575 508 aa5.01□□□□□ -1.61
BRCA2-203ENST00000528762 CRELD1Q96HD1 420 aa5.01□□□□□ -1.61
BRCA2-203ENST00000528762 SRCIN1Q9C0H9 1055 aa5.01□□□□□ -1.61
BRCA2-203ENST00000528762 CCSER2Q9H7U1 834 aa5.01□□□□□ -1.61
BRCA2-203ENST00000528762 PAK6Q9NQU5 681 aaPredicted RBP5.01□□□□□ -1.61
BRCA2-203ENST00000528762 BSDC1Q9NW68 430 aaPredicted RBP5.01□□□□□ -1.61
BRCA2-203ENST00000528762 FAM8A1Q9UBU6 413 aa5.01□□□□□ -1.61
BRCA2-203ENST00000528762 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5□□□□□ -1.61
BRCA2-203ENST00000528762 TMEM238LA0A1B0GVL6 79 aa5□□□□□ -1.61
BRCA2-203ENST00000528762 BTBD11A6QL63 1104 aa5□□□□□ -1.61
BRCA2-203ENST00000528762 ZNF862O60290 1169 aa5□□□□□ -1.61
BRCA2-203ENST00000528762 PRNPP04156 253 aa5□□□□□ -1.61
BRCA2-203ENST00000528762 FAM87AP0C7U9 286 aa5□□□□□ -1.61
BRCA2-203ENST00000528762 HCLS1P14317 486 aaPredicted RBP5□□□□□ -1.61
BRCA2-203ENST00000528762 NXPE4Q6UWF7 544 aa5□□□□□ -1.61
BRCA2-203ENST00000528762 SEZ6L2Q6UXD5 910 aa5□□□□□ -1.61
BRCA2-203ENST00000528762 ZNF654Q8IZM8 581 aa5□□□□□ -1.61
BRCA2-203ENST00000528762 DDX54Q8TDD1 881 aaKnown RBP5□□□□□ -1.61
BRCA2-203ENST00000528762 STK35Q8TDR2 534 aa5□□□□□ -1.61
BRCA2-203ENST00000528762 BCO2Q9BYV7 579 aa5□□□□□ -1.61
BRCA2-203ENST00000528762 ACBD3Q9H3P7 528 aa5□□□□□ -1.61
BRCA2-203ENST00000528762 PIDD1Q9HB75 910 aa5□□□□□ -1.61
BRCA2-203ENST00000528762 GPN3Q9UHW5 284 aaPredicted RBP5□□□□□ -1.61
BRCA2-203ENST00000528762 RNGTTO60942 597 aaKnown RBP4.99□□□□□ -1.61
BRCA2-203ENST00000528762 LEFTY1O75610 366 aa4.99□□□□□ -1.61
BRCA2-203ENST00000528762 PTPN12Q05209 780 aaKnown RBP4.99□□□□□ -1.61
BRCA2-203ENST00000528762 HP1BP3Q5SSJ5 553 aaPredicted RBP4.99□□□□□ -1.61
BRCA2-203ENST00000528762 OGFOD2Q6N063 350 aa4.99□□□□□ -1.61
BRCA2-203ENST00000528762 DTHD1Q6ZMT9 781 aa4.99□□□□□ -1.61
BRCA2-203ENST00000528762 HS2ST1Q7LGA3 356 aa4.99□□□□□ -1.61
BRCA2-203ENST00000528762 SPRED2Q7Z698 418 aa4.99□□□□□ -1.61
BRCA2-203ENST00000528762 VPS37DQ86XT2 251 aa4.99□□□□□ -1.61
BRCA2-203ENST00000528762 FAM177A1Q8N128 213 aaPredicted RBP4.99□□□□□ -1.61
BRCA2-203ENST00000528762 PLD6Q8N2A8 252 aaKnown RBP4.99□□□□□ -1.61
BRCA2-203ENST00000528762 GLIS3Q8NEA6 775 aa4.99□□□□□ -1.61
BRCA2-203ENST00000528762 KCNB2Q92953 911 aa4.99□□□□□ -1.61
BRCA2-203ENST00000528762 FBXL18Q96ME1 805 aa4.99□□□□□ -1.61
BRCA2-203ENST00000528762 FANCD2OSQ96PS1 177 aa4.99□□□□□ -1.61
BRCA2-203ENST00000528762 TANGO6Q9C0B7 1094 aa4.99□□□□□ -1.61
BRCA2-203ENST00000528762 GGT7Q9UJ14 662 aa4.99□□□□□ -1.61
BRCA2-203ENST00000528762 DDX41Q9UJV9 622 aaKnown RBP4.99□□□□□ -1.61
BRCA2-203ENST00000528762 USP17L7P0C7H9 530 aa4.98□□□□□ -1.61
BRCA2-203ENST00000528762 ATP2B1P20020 1258 aa4.98□□□□□ -1.61
BRCA2-203ENST00000528762 ST13P50502 369 aaKnown RBP4.98□□□□□ -1.61
BRCA2-203ENST00000528762 RACK1P63244 317 aaKnown RBP4.98□□□□□ -1.61
BRCA2-203ENST00000528762 AP3B2Q13367 1082 aa4.98□□□□□ -1.61
BRCA2-203ENST00000528762 TTLL4Q14679 1199 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms