RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 RRP12Q5JTH9 1297 aaKnown RBP21.77■■□□□ 1.08
TM9SF1-206ENST00000528669 SGMS1Q86VZ5 419 aa21.77■■□□□ 1.08
TM9SF1-206ENST00000528669 ZKSCAN3Q9BRR0 538 aa21.77■■□□□ 1.08
TM9SF1-206ENST00000528669 HSD3B7Q9H2F3 369 aa21.77■■□□□ 1.08
TM9SF1-206ENST00000528669 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.77■■□□□ 1.08
TM9SF1-206ENST00000528669 V9GYY5 206 aaPredicted RBP21.77■■□□□ 1.08
TM9SF1-206ENST00000528669 E4F1Q66K89 784 aaPredicted RBP21.76■■□□□ 1.07
TM9SF1-206ENST00000528669 TUBE1Q9UJT0 475 aa21.76■■□□□ 1.07
TM9SF1-206ENST00000528669 BCL9O00512 1426 aa21.76■■□□□ 1.07
TM9SF1-206ENST00000528669 SFPQP23246 707 aaKnown RBP eCLIP21.76■■□□□ 1.07
TM9SF1-206ENST00000528669 GUCY1A2P33402 732 aa21.76■■□□□ 1.07
TM9SF1-206ENST00000528669 SSRP1Q08945 709 aaKnown RBP21.76■■□□□ 1.07
TM9SF1-206ENST00000528669 SPECC1Q5M775 1068 aa21.76■■□□□ 1.07
TM9SF1-206ENST00000528669 RESP18Q5W5W9 173 aa21.76■■□□□ 1.07
TM9SF1-206ENST00000528669 TOMM22Q9NS69 142 aa21.76■■□□□ 1.07
TM9SF1-206ENST00000528669 ZNF215Q9UL58 517 aaPredicted RBP21.76■■□□□ 1.07
TM9SF1-206ENST00000528669 MROH5Q6ZUA9 1318 aa21.76■■□□□ 1.07
TM9SF1-206ENST00000528669 SLC5A1P13866 664 aa21.75■■□□□ 1.07
TM9SF1-206ENST00000528669 MAP3K12Q12852 859 aa21.75■■□□□ 1.07
TM9SF1-206ENST00000528669 ALX1Q15699 326 aa21.75■■□□□ 1.07
TM9SF1-206ENST00000528669 LONRF3Q496Y0 759 aa21.75■■□□□ 1.07
TM9SF1-206ENST00000528669 CCDC150Q8NCX0 1101 aa21.75■■□□□ 1.07
TM9SF1-206ENST00000528669 SEC31BQ9NQW1 1179 aa21.75■■□□□ 1.07
TM9SF1-206ENST00000528669 CHD4Q14839 1912 aa21.75■■□□□ 1.07
TM9SF1-206ENST00000528669 ZNF335Q9H4Z2 1342 aaPredicted RBP21.75■■□□□ 1.07
TM9SF1-206ENST00000528669 CCDC82Q8N4S0 544 aa21.75■■□□□ 1.07
TM9SF1-206ENST00000528669 RGS22Q8NE09 1264 aa21.75■■□□□ 1.07
TM9SF1-206ENST00000528669 DPF2Q92785 391 aa21.75■■□□□ 1.07
TM9SF1-206ENST00000528669 SLIT2O94813 1529 aa21.74■■□□□ 1.07
TM9SF1-206ENST00000528669 GSG1L2A8MUP6 293 aa21.74■■□□□ 1.07
TM9SF1-206ENST00000528669 IKBKBO14920 756 aa21.74■■□□□ 1.07
TM9SF1-206ENST00000528669 PTPN21Q16825 1174 aa21.74■■□□□ 1.07
TM9SF1-206ENST00000528669 METTL16Q86W50 562 aaKnown RBP21.74■■□□□ 1.07
TM9SF1-206ENST00000528669 ZNF34Q8IZ26 560 aa21.74■■□□□ 1.07
TM9SF1-206ENST00000528669 BTBD18B2RXH4 712 aa21.74■■□□□ 1.07
TM9SF1-206ENST00000528669 LIFRP42702 1097 aa21.74■■□□□ 1.07
TM9SF1-206ENST00000528669 AKNAD1Q5T1N1 836 aa21.74■■□□□ 1.07
TM9SF1-206ENST00000528669 CMTR1Q8N1G2 835 aaKnown RBP21.74■■□□□ 1.07
TM9SF1-206ENST00000528669 LCORLQ8N3X6 602 aa21.74■■□□□ 1.07
TM9SF1-206ENST00000528669 KIF18AQ8NI77 898 aa21.74■■□□□ 1.07
TM9SF1-206ENST00000528669 PKNOX2Q96KN3 472 aa21.74■■□□□ 1.07
TM9SF1-206ENST00000528669 KCNJ14Q9UNX9 436 aa21.74■■□□□ 1.07
TM9SF1-206ENST00000528669 SUSD4Q5VX71 490 aa21.73■■□□□ 1.07
TM9SF1-206ENST00000528669 MFSD6Q6ZSS7 791 aa21.73■■□□□ 1.07
TM9SF1-206ENST00000528669 FOXP4Q8IVH2 680 aaPredicted RBP21.73■■□□□ 1.07
TM9SF1-206ENST00000528669 PPP1R13BQ96KQ4 1090 aa21.73■■□□□ 1.07
TM9SF1-206ENST00000528669 MPHOSPH8Q99549 860 aa21.73■■□□□ 1.07
TM9SF1-206ENST00000528669 KCND1Q9NSA2 647 aa21.73■■□□□ 1.07
TM9SF1-206ENST00000528669 ERVV-1B6SEH8 477 aa21.72■■□□□ 1.07
TM9SF1-206ENST00000528669 FOXN1O15353 648 aa21.72■■□□□ 1.07
TM9SF1-206ENST00000528669 FMNL1O95466 1100 aaPredicted RBP21.72■■□□□ 1.07
TM9SF1-206ENST00000528669 CNNM3Q8NE01 707 aa21.72■■□□□ 1.07
TM9SF1-206ENST00000528669 KCNH3Q9ULD8 1083 aa21.72■■□□□ 1.07
TM9SF1-206ENST00000528669 CUTAO60888 179 aa21.72■■□□□ 1.07
TM9SF1-206ENST00000528669 TDO2P48775 406 aa21.72■■□□□ 1.07
TM9SF1-206ENST00000528669 BCAMP50895 628 aa21.72■■□□□ 1.07
TM9SF1-206ENST00000528669 MIGA1Q8NAN2 632 aa21.72■■□□□ 1.07
TM9SF1-206ENST00000528669 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.72■■□□□ 1.07
TM9SF1-206ENST00000528669 A0A0G2JS52 829 aa21.71■■□□□ 1.07
TM9SF1-206ENST00000528669 FAM237AA0A1B0GTK4 181 aa21.71■■□□□ 1.07
TM9SF1-206ENST00000528669 SERPINC1P01008 464 aa21.71■■□□□ 1.07
TM9SF1-206ENST00000528669 IL6STP40189 918 aaPredicted RBP21.71■■□□□ 1.07
TM9SF1-206ENST00000528669 UBASH3AP57075 661 aa21.71■■□□□ 1.07
TM9SF1-206ENST00000528669 MYL5Q02045 173 aa21.71■■□□□ 1.07
TM9SF1-206ENST00000528669 KRBA2Q6ZNG9 492 aa21.71■■□□□ 1.07
TM9SF1-206ENST00000528669 SLC4A4Q9Y6R1 1079 aa21.71■■□□□ 1.07
TM9SF1-206ENST00000528669 ZSCAN20P17040 1043 aaPredicted RBP21.71■■□□□ 1.07
TM9SF1-206ENST00000528669 GRIN1Q05586 938 aa21.71■■□□□ 1.07
TM9SF1-206ENST00000528669 NOSTRINQ8IVI9 506 aa21.71■■□□□ 1.07
TM9SF1-206ENST00000528669 PCDHA5Q9Y5H7 936 aa21.71■■□□□ 1.07
TM9SF1-206ENST00000528669 STK36Q9NRP7 1315 aa21.7■■□□□ 1.07
TM9SF1-206ENST00000528669 IFNAR1P17181 557 aa21.7■■□□□ 1.06
TM9SF1-206ENST00000528669 TOB1P50616 345 aaPredicted RBP21.7■■□□□ 1.06
TM9SF1-206ENST00000528669 DIS3L2Q8IYB7 885 aaKnown RBP21.7■■□□□ 1.06
TM9SF1-206ENST00000528669 KRT23Q9C075 422 aa21.7■■□□□ 1.06
TM9SF1-206ENST00000528669 CNNM2Q9H8M5 875 aa21.7■■□□□ 1.06
TM9SF1-206ENST00000528669 CGNQ9P2M7 1197 aaKnown RBP21.7■■□□□ 1.06
TM9SF1-206ENST00000528669 CFAP100Q494V2 611 aa21.7■■□□□ 1.06
TM9SF1-206ENST00000528669 KRI1Q8N9T8 703 aaKnown RBP21.7■■□□□ 1.06
TM9SF1-206ENST00000528669 PRDM4Q9UKN5 801 aa21.7■■□□□ 1.06
TM9SF1-206ENST00000528669 ARAP2Q8WZ64 1704 aa21.7■■□□□ 1.06
TM9SF1-206ENST00000528669 LRP5O75197 1615 aa21.69■■□□□ 1.06
TM9SF1-206ENST00000528669 DOCK2Q92608 1830 aa21.69■■□□□ 1.06
TM9SF1-206ENST00000528669 MMP1P03956 469 aa21.69■■□□□ 1.06
TM9SF1-206ENST00000528669 GOLGA8FQ08AF8 430 aa21.69■■□□□ 1.06
TM9SF1-206ENST00000528669 GOLGA8DPQ0D2H9 430 aa21.69■■□□□ 1.06
TM9SF1-206ENST00000528669 WTAPQ15007 396 aa21.69■■□□□ 1.06
TM9SF1-206ENST00000528669 RTN1Q16799 776 aa21.69■■□□□ 1.06
TM9SF1-206ENST00000528669 HSP90AA4PQ58FG1 418 aa21.69■■□□□ 1.06
TM9SF1-206ENST00000528669 OLFM4Q6UX06 510 aa21.69■■□□□ 1.06
TM9SF1-206ENST00000528669 FANCLQ9NW38 375 aa21.69■■□□□ 1.06
TM9SF1-206ENST00000528669 BMP6P22004 513 aa21.69■■□□□ 1.06
TM9SF1-206ENST00000528669 PDE4BQ07343 736 aa21.69■■□□□ 1.06
TM9SF1-206ENST00000528669 SYT10Q6XYQ8 523 aa21.69■■□□□ 1.06
TM9SF1-206ENST00000528669 IQSEC3Q9UPP2 1182 aaPredicted RBP21.69■■□□□ 1.06
TM9SF1-206ENST00000528669 TMEM232C9JQI7 657 aa21.68■■□□□ 1.06
TM9SF1-206ENST00000528669 NUP133Q8WUM0 1156 aa21.68■■□□□ 1.06
TM9SF1-206ENST00000528669 EXOC5O00471 708 aa21.68■■□□□ 1.06
TM9SF1-206ENST00000528669 ATP2B1P20020 1258 aa21.68■■□□□ 1.06
TM9SF1-206ENST00000528669 NR5A1Q13285 461 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms