RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 H7C1D1 291 aa17.22■□□□□ 0.35
USP47-207ENST00000527733 FAM47AQ5JRC9 791 aa17.22■□□□□ 0.35
USP47-207ENST00000527733 RC3H1Q5TC82 1133 aaKnown RBP17.22■□□□□ 0.35
USP47-207ENST00000527733 GOLGA6L1Q8N7Z2 621 aa17.22■□□□□ 0.35
USP47-207ENST00000527733 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.22■□□□□ 0.355e-6■■■■□ 19.4
USP47-207ENST00000527733 ARID3AQ99856 593 aa17.22■□□□□ 0.35
USP47-207ENST00000527733 STAT6P42226 847 aa17.22■□□□□ 0.35
USP47-207ENST00000527733 MATR3P43243 847 aaKnown RBP eCLIP17.22■□□□□ 0.351e-6■■■■■ 30.2
USP47-207ENST00000527733 SLC1A4P43007 532 aa17.22■□□□□ 0.35
USP47-207ENST00000527733 ME3Q16798 604 aa17.22■□□□□ 0.35
USP47-207ENST00000527733 PICK1Q9NRD5 415 aa17.22■□□□□ 0.35
USP47-207ENST00000527733 CARMIL3Q8ND23 1372 aa17.22■□□□□ 0.35
USP47-207ENST00000527733 LZTS2Q9BRK4 669 aa17.21■□□□□ 0.35
USP47-207ENST00000527733 RASGRF1Q13972 1273 aa17.21■□□□□ 0.35
USP47-207ENST00000527733 NOM1Q5C9Z4 860 aaKnown RBP17.21■□□□□ 0.35
USP47-207ENST00000527733 FKBP15Q5T1M5 1219 aa17.21■□□□□ 0.35
USP47-207ENST00000527733 RMND1Q9NWS8 449 aa17.21■□□□□ 0.35
USP47-207ENST00000527733 USP25Q9UHP3 1055 aa17.21■□□□□ 0.35
USP47-207ENST00000527733 PCP11498 1178 aaKnown RBP17.21■□□□□ 0.35
USP47-207ENST00000527733 TNFAIP1Q13829 316 aa17.21■□□□□ 0.35
USP47-207ENST00000527733 ZNF589Q86UQ0 364 aaPredicted RBP17.21■□□□□ 0.35
USP47-207ENST00000527733 TICAM2Q86XR7 235 aa17.21■□□□□ 0.35
USP47-207ENST00000527733 DIS3L2Q8IYB7 885 aaKnown RBP17.21■□□□□ 0.35
USP47-207ENST00000527733 RASEFQ8IZ41 740 aa17.21■□□□□ 0.35
USP47-207ENST00000527733 ZNF654Q8IZM8 581 aa17.21■□□□□ 0.35
USP47-207ENST00000527733 GTF3C6Q969F1 213 aa17.21■□□□□ 0.35
USP47-207ENST00000527733 LRSAM1Q6UWE0 723 aa17.2■□□□□ 0.34
USP47-207ENST00000527733 TXLNBQ8N3L3 684 aa17.2■□□□□ 0.34
USP47-207ENST00000527733 SFPQP23246 707 aaKnown RBP eCLIP17.2■□□□□ 0.34
USP47-207ENST00000527733 ISM2Q6H9L7 571 aa17.2■□□□□ 0.34
USP47-207ENST00000527733 TRMT1LQ7Z2T5 733 aaKnown RBP17.2■□□□□ 0.34
USP47-207ENST00000527733 PHKBQ93100 1093 aa17.2■□□□□ 0.34
USP47-207ENST00000527733 MASTLQ96GX5 879 aa17.2■□□□□ 0.34
USP47-207ENST00000527733 MCM7P33993 719 aa17.2■□□□□ 0.34
USP47-207ENST00000527733 AFMP43652 599 aa17.2■□□□□ 0.34
USP47-207ENST00000527733 CYP21A2P08686 494 aa17.2■□□□□ 0.34
USP47-207ENST00000527733 JAK2O60674 1132 aa17.19■□□□□ 0.34
USP47-207ENST00000527733 RABL6Q3YEC7 729 aaPredicted RBP17.19■□□□□ 0.34
USP47-207ENST00000527733 KRT79Q5XKE5 535 aa17.19■□□□□ 0.34
USP47-207ENST00000527733 STXBP4Q6ZWJ1 553 aa17.19■□□□□ 0.34
USP47-207ENST00000527733 OSBP2Q969R2 916 aa17.19■□□□□ 0.34
USP47-207ENST00000527733 PLS1Q14651 629 aa17.19■□□□□ 0.34
USP47-207ENST00000527733 ZFYVE27Q5T4F4 411 aa17.19■□□□□ 0.34
USP47-207ENST00000527733 DTHD1Q6ZMT9 781 aa17.19■□□□□ 0.34
USP47-207ENST00000527733 KRI1Q8N9T8 703 aaKnown RBP17.19■□□□□ 0.34
USP47-207ENST00000527733 GLT8D2Q9H1C3 349 aa17.19■□□□□ 0.34
USP47-207ENST00000527733 FOXO4P98177 505 aa17.19■□□□□ 0.34
USP47-207ENST00000527733 ZSCAN10Q96SZ4 725 aaPredicted RBP17.19■□□□□ 0.34
USP47-207ENST00000527733 MINPP1Q9UNW1 487 aa17.19■□□□□ 0.34
USP47-207ENST00000527733 B4DLN1 442 aa17.19■□□□□ 0.34
USP47-207ENST00000527733 OTUD7BQ6GQQ9 843 aa17.19■□□□□ 0.34
USP47-207ENST00000527733 CHMP4BP1P59074 171 aa17.18■□□□□ 0.34
USP47-207ENST00000527733 ZNF397Q8NF99 534 aaPredicted RBP17.18■□□□□ 0.34
USP47-207ENST00000527733 SCLT1Q96NL6 688 aa17.18■□□□□ 0.34
USP47-207ENST00000527733 TNKSO95271 1327 aa17.18■□□□□ 0.34
USP47-207ENST00000527733 TOP1P11387 765 aaKnown RBP17.18■□□□□ 0.34
USP47-207ENST00000527733 UVSSAQ2YD98 709 aa17.18■□□□□ 0.34
USP47-207ENST00000527733 KRT40Q6A162 431 aa17.18■□□□□ 0.34
USP47-207ENST00000527733 NAP1L4Q99733 375 aaKnown RBP17.18■□□□□ 0.34
USP47-207ENST00000527733 EXOC1Q9NV70 894 aa17.18■□□□□ 0.34
USP47-207ENST00000527733 CLIP2Q9UDT6 1046 aa17.18■□□□□ 0.34
USP47-207ENST00000527733 TBCAO75347 108 aaKnown RBP17.18■□□□□ 0.34
USP47-207ENST00000527733 NFIXQ14938 502 aa17.18■□□□□ 0.34
USP47-207ENST00000527733 CCDC93Q567U6 631 aa17.18■□□□□ 0.34
USP47-207ENST00000527733 CELF1Q92879 486 aaKnown RBP17.18■□□□□ 0.34
USP47-207ENST00000527733 DHX58Q96C10 678 aa17.18■□□□□ 0.34
USP47-207ENST00000527733 DBNDD1Q9H9R9 158 aa17.17■□□□□ 0.34
USP47-207ENST00000527733 UBR1Q8IWV7 1749 aa17.17■□□□□ 0.34
USP47-207ENST00000527733 M0R2C6 588 aa17.17■□□□□ 0.34
USP47-207ENST00000527733 ADCK5Q3MIX3 580 aa17.17■□□□□ 0.34
USP47-207ENST00000527733 RRAGBQ5VZM2 374 aa17.17■□□□□ 0.34
USP47-207ENST00000527733 PUS7LQ9H0K6 701 aaKnown RBP17.17■□□□□ 0.34
USP47-207ENST00000527733 TPCN1Q9ULQ1 816 aa17.17■□□□□ 0.34
USP47-207ENST00000527733 PFKFB2O60825 505 aa17.17■□□□□ 0.34
USP47-207ENST00000527733 MCAMP43121 646 aa17.17■□□□□ 0.34
USP47-207ENST00000527733 CAGE1Q8TC20 777 aa17.17■□□□□ 0.34
USP47-207ENST00000527733 MED23Q9ULK4 1368 aa17.17■□□□□ 0.34
USP47-207ENST00000527733 LETM2Q2VYF4 491 aa17.17■□□□□ 0.34
USP47-207ENST00000527733 ANO1Q5XXA6 986 aa17.17■□□□□ 0.34
USP47-207ENST00000527733 FAM173BQ6P4H8 233 aa17.17■□□□□ 0.34
USP47-207ENST00000527733 PLA2G12BQ9BX93 195 aa17.17■□□□□ 0.34
USP47-207ENST00000527733 PIH1D3Q9NQM4 214 aaKnown RBP17.17■□□□□ 0.34
USP47-207ENST00000527733 COL3A1P02461 1466 aaPredicted RBP17.16■□□□□ 0.34
USP47-207ENST00000527733 ZYXQ15942 572 aaKnown RBP17.16■□□□□ 0.34
USP47-207ENST00000527733 ARHGAP27Q6ZUM4 889 aa17.16■□□□□ 0.34
USP47-207ENST00000527733 TTLL6Q8N841 843 aa17.16■□□□□ 0.34
USP47-207ENST00000527733 COA1Q9GZY4 146 aa17.16■□□□□ 0.34
USP47-207ENST00000527733 ATF5Q9Y2D1 282 aaPredicted RBP17.16■□□□□ 0.34
USP47-207ENST00000527733 C3P01024 1663 aa17.16■□□□□ 0.34
USP47-207ENST00000527733 MTIF2P46199 727 aaKnown RBP17.16■□□□□ 0.34
USP47-207ENST00000527733 ZNF34Q8IZ26 560 aa17.16■□□□□ 0.34
USP47-207ENST00000527733 FANCBQ8NB91 859 aa17.16■□□□□ 0.34
USP47-207ENST00000527733 MAP2P11137 1827 aaKnown RBP17.16■□□□□ 0.34
USP47-207ENST00000527733 MEGF6O75095 1541 aa17.16■□□□□ 0.34
USP47-207ENST00000527733 SNAP23O00161 211 aa17.16■□□□□ 0.34
USP47-207ENST00000527733 PDIA6Q15084 440 aa17.16■□□□□ 0.34
USP47-207ENST00000527733 ZNF174Q15697 407 aa17.16■□□□□ 0.34
USP47-207ENST00000527733 TMOD4Q9NZQ9 345 aa17.16■□□□□ 0.34
USP47-207ENST00000527733 ESPNB1AK53 854 aa17.15■□□□□ 0.34
USP47-207ENST00000527733 DYNLL1P63167 89 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms