RNA–Protein interactions for RNA: ENST00000527646.5

VPS51-204, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS51, Length 2,144 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-204ENST00000527646 COL1A1P02452 1464 aaPredicted RBP21.81■■□□□ 1.08
VPS51-204ENST00000527646 PDS5AQ29RF7 1337 aaKnown RBP21.81■■□□□ 1.08
VPS51-204ENST00000527646 SALL1Q9NSC2 1324 aa21.81■■□□□ 1.08
VPS51-204ENST00000527646 B4E1Z4 1266 aa21.8■■□□□ 1.08
VPS51-204ENST00000527646 TNNT1P13805 278 aa21.8■■□□□ 1.08
VPS51-204ENST00000527646 GRAPQ13588 217 aa21.8■■□□□ 1.08
VPS51-204ENST00000527646 GRAPLQ8TC17 118 aaPredicted RBP21.8■■□□□ 1.08
VPS51-204ENST00000527646 TRIM5Q9C035 493 aa21.8■■□□□ 1.08
VPS51-204ENST00000527646 TNRC6CQ9HCJ0 1690 aaKnown RBP21.8■■□□□ 1.08
VPS51-204ENST00000527646 MAGEB6P1A0A0J9YX57 407 aa21.8■■□□□ 1.08
VPS51-204ENST00000527646 CPLX1O14810 134 aa21.8■■□□□ 1.08
VPS51-204ENST00000527646 CDC25BP30305 580 aa21.8■■□□□ 1.08
VPS51-204ENST00000527646 GABPB1Q06547 395 aaPredicted RBP21.8■■□□□ 1.08
VPS51-204ENST00000527646 KRT23Q9C075 422 aa21.8■■□□□ 1.08
VPS51-204ENST00000527646 CLSTN2Q9H4D0 955 aa21.8■■□□□ 1.08
VPS51-204ENST00000527646 PRKAB2O43741 272 aa21.79■■□□□ 1.08
VPS51-204ENST00000527646 ST5P78524 1137 aa21.79■■□□□ 1.08
VPS51-204ENST00000527646 CAMK4Q16566 473 aa21.79■■□□□ 1.08
VPS51-204ENST00000527646 MFSD6Q6ZSS7 791 aa21.79■■□□□ 1.08
VPS51-204ENST00000527646 CCDC112Q8NEF3 446 aa21.79■■□□□ 1.08
VPS51-204ENST00000527646 C16orf45Q96MC5 204 aaPredicted RBP21.79■■□□□ 1.08
VPS51-204ENST00000527646 DACT1Q9NYF0 836 aa21.79■■□□□ 1.08
VPS51-204ENST00000527646 NEDD4P46934 1319 aa21.79■■□□□ 1.08
VPS51-204ENST00000527646 BRWD3Q6RI45 1802 aa21.79■■□□□ 1.08
VPS51-204ENST00000527646 GYS1P13807 737 aa21.79■■□□□ 1.08
VPS51-204ENST00000527646 KLRK1P26718 216 aa21.79■■□□□ 1.08
VPS51-204ENST00000527646 AKNAD1Q5T1N1 836 aa21.79■■□□□ 1.08
VPS51-204ENST00000527646 CYB5R4Q7L1T6 521 aa21.79■■□□□ 1.08
VPS51-204ENST00000527646 LEO1Q8WVC0 666 aaPredicted RBP21.79■■□□□ 1.08
VPS51-204ENST00000527646 PODXL2Q9NZ53 605 aa21.79■■□□□ 1.08
VPS51-204ENST00000527646 ANKIB1Q9P2G1 1089 aa21.79■■□□□ 1.08
VPS51-204ENST00000527646 PRR5LQ6MZQ0 368 aa21.78■■□□□ 1.08
VPS51-204ENST00000527646 RPGRQ92834 1020 aaKnown RBP21.78■■□□□ 1.08
VPS51-204ENST00000527646 SPATA32Q96LK8 384 aa21.78■■□□□ 1.08
VPS51-204ENST00000527646 TFCP2L1Q9NZI6 479 aa21.78■■□□□ 1.08
VPS51-204ENST00000527646 SH2B2O14492 632 aaPredicted RBP21.77■■□□□ 1.08
VPS51-204ENST00000527646 CTDSPL2Q05D32 466 aa21.77■■□□□ 1.08
VPS51-204ENST00000527646 ADGRA1Q86SQ6 560 aa21.77■■□□□ 1.08
VPS51-204ENST00000527646 RNF41Q9H4P4 317 aaPredicted RBP21.77■■□□□ 1.08
VPS51-204ENST00000527646 CHD4Q14839 1912 aa21.77■■□□□ 1.08
VPS51-204ENST00000527646 MYH13Q9UKX3 1938 aa21.77■■□□□ 1.08
VPS51-204ENST00000527646 NEMFO60524 1076 aa21.77■■□□□ 1.08
VPS51-204ENST00000527646 LRMPQ12912 555 aa21.77■■□□□ 1.08
VPS51-204ENST00000527646 CFAP45Q9UL16 551 aa21.77■■□□□ 1.08
VPS51-204ENST00000527646 HPS5Q9UPZ3 1129 aa21.77■■□□□ 1.08
VPS51-204ENST00000527646 TIAM2Q8IVF5 1701 aa21.77■■□□□ 1.07
VPS51-204ENST00000527646 PPFIA3O75145 1194 aa21.76■■□□□ 1.07
VPS51-204ENST00000527646 CKAP2LQ8IYA6 745 aa21.76■■□□□ 1.07
VPS51-204ENST00000527646 STAG1Q8WVM7 1258 aa21.76■■□□□ 1.07
VPS51-204ENST00000527646 DDX41Q9UJV9 622 aaKnown RBP21.76■■□□□ 1.07
VPS51-204ENST00000527646 LEMD3Q9Y2U8 911 aa21.76■■□□□ 1.07
VPS51-204ENST00000527646 SERPINB2P05120 415 aa21.76■■□□□ 1.07
VPS51-204ENST00000527646 ZNF165P49910 485 aa21.76■■□□□ 1.07
VPS51-204ENST00000527646 FOSBP53539 338 aa21.76■■□□□ 1.07
VPS51-204ENST00000527646 TOMM22Q9NS69 142 aa21.76■■□□□ 1.07
VPS51-204ENST00000527646 CLIP2Q9UDT6 1046 aa21.76■■□□□ 1.07
VPS51-204ENST00000527646 CACNA1SQ13698 1873 aa21.75■■□□□ 1.07
VPS51-204ENST00000527646 METAP2P50579 478 aaKnown RBP eCLIP21.75■■□□□ 1.072e-7■■■■□ 22
VPS51-204ENST00000527646 SART3Q15020 963 aaKnown RBP21.75■■□□□ 1.07
VPS51-204ENST00000527646 TPD52L1Q16890 204 aaPredicted RBP21.75■■□□□ 1.07
VPS51-204ENST00000527646 TMEM67Q5HYA8 995 aa21.75■■□□□ 1.07
VPS51-204ENST00000527646 TMED8Q6PL24 325 aaPredicted RBP21.75■■□□□ 1.07
VPS51-204ENST00000527646 NFXL1Q6ZNB6 911 aa21.75■■□□□ 1.07
VPS51-204ENST00000527646 CDKL5O76039 1030 aa21.74■■□□□ 1.07
VPS51-204ENST00000527646 CPLX2Q6PUV4 134 aaKnown RBP21.74■■□□□ 1.07
VPS51-204ENST00000527646 PGBD1Q96JS3 809 aa21.74■■□□□ 1.07
VPS51-204ENST00000527646 RIOK1Q9BRS2 568 aaKnown RBP21.74■■□□□ 1.07
VPS51-204ENST00000527646 ZSWIM5Q9P217 1185 aa21.74■■□□□ 1.07
VPS51-204ENST00000527646 NRBP1Q9UHY1 535 aa21.74■■□□□ 1.07
VPS51-204ENST00000527646 MORC2Q9Y6X9 1032 aaPredicted RBP21.74■■□□□ 1.07
VPS51-204ENST00000527646 XDHP47989 1333 aa21.74■■□□□ 1.07
VPS51-204ENST00000527646 ZBTB22O15209 634 aa21.74■■□□□ 1.07
VPS51-204ENST00000527646 LIFRP42702 1097 aa21.74■■□□□ 1.07
VPS51-204ENST00000527646 PPARAQ07869 468 aa21.74■■□□□ 1.07
VPS51-204ENST00000527646 TXNRD1Q16881 649 aa21.74■■□□□ 1.07
VPS51-204ENST00000527646 APOA5Q6Q788 366 aa21.74■■□□□ 1.07
VPS51-204ENST00000527646 SGMS1Q86VZ5 419 aa21.74■■□□□ 1.07
VPS51-204ENST00000527646 IGDCC4Q8TDY8 1250 aa21.74■■□□□ 1.07
VPS51-204ENST00000527646 SDR42E1Q8WUS8 393 aa21.74■■□□□ 1.07
VPS51-204ENST00000527646 ORC3Q9UBD5 711 aaPredicted RBP21.74■■□□□ 1.07
VPS51-204ENST00000527646 IFIT3O14879 490 aaKnown RBP21.73■■□□□ 1.07
VPS51-204ENST00000527646 FDPSP14324 419 aaKnown RBP21.73■■□□□ 1.07
VPS51-204ENST00000527646 RRP12Q5JTH9 1297 aaKnown RBP21.73■■□□□ 1.07
VPS51-204ENST00000527646 SARM1Q6SZW1 724 aa21.73■■□□□ 1.07
VPS51-204ENST00000527646 NSUN4Q96CB9 384 aaKnown RBP21.73■■□□□ 1.07
VPS51-204ENST00000527646 ZBTB43O43298 467 aa21.73■■□□□ 1.07
VPS51-204ENST00000527646 ADD1P35611 737 aaKnown RBP21.73■■□□□ 1.07
VPS51-204ENST00000527646 CEP135Q66GS9 1140 aa21.73■■□□□ 1.07
VPS51-204ENST00000527646 SPTY2D1Q68D10 685 aaPredicted RBP21.73■■□□□ 1.07
VPS51-204ENST00000527646 ZNF772Q68DY9 489 aaPredicted RBP21.73■■□□□ 1.07
VPS51-204ENST00000527646 RAB11FIP4Q86YS3 637 aa21.73■■□□□ 1.07
VPS51-204ENST00000527646 INCENPQ9NQS7 918 aa21.73■■□□□ 1.07
VPS51-204ENST00000527646 ERICH2A1L162 156 aa21.72■■□□□ 1.07
VPS51-204ENST00000527646 RBM6P78332 1123 aaKnown RBP21.72■■□□□ 1.07
VPS51-204ENST00000527646 MECOMQ03112 1051 aa21.72■■□□□ 1.07
VPS51-204ENST00000527646 CRY2Q49AN0 593 aa21.72■■□□□ 1.07
VPS51-204ENST00000527646 ATL3Q6DD88 541 aa21.72■■□□□ 1.07
VPS51-204ENST00000527646 SYNE3Q6ZMZ3 975 aa21.72■■□□□ 1.07
VPS51-204ENST00000527646 RBM17Q96I25 401 aaKnown RBP21.72■■□□□ 1.07
VPS51-204ENST00000527646 C8orf76Q96K31 380 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms