RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 IKBKBO14920 756 aa8.51□□□□□ -1.05
SOX6-208ENST00000527619 CUTAO60888 179 aa8.51□□□□□ -1.05
SOX6-208ENST00000527619 UBTFL1P0CB47 393 aaPredicted RBP8.51□□□□□ -1.05
SOX6-208ENST00000527619 NLRP12P59046 1061 aa8.51□□□□□ -1.05
SOX6-208ENST00000527619 CASP8Q14790 479 aa8.51□□□□□ -1.05
SOX6-208ENST00000527619 HHATQ5VTY9 493 aa8.51□□□□□ -1.05
SOX6-208ENST00000527619 TTLL5Q6EMB2 1281 aa8.51□□□□□ -1.05
SOX6-208ENST00000527619 C16orf87Q6PH81 154 aa8.51□□□□□ -1.05
SOX6-208ENST00000527619 FMR1NBQ8N0W7 255 aaPredicted RBP8.51□□□□□ -1.05
SOX6-208ENST00000527619 AFAP1L1Q8TED9 768 aa8.51□□□□□ -1.05
SOX6-208ENST00000527619 ZNF483Q8TF39 744 aaPredicted RBP8.51□□□□□ -1.05
SOX6-208ENST00000527619 MRPS27Q92552 414 aaKnown RBP8.51□□□□□ -1.05
SOX6-208ENST00000527619 MAP4K1Q92918 833 aa8.51□□□□□ -1.05
SOX6-208ENST00000527619 SYNRGQ9UMZ2 1314 aa8.51□□□□□ -1.05
SOX6-208ENST00000527619 PIK3C2BO00750 1634 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 ABCC6O95255 1503 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 CRB1P82279 1406 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 ME1P48163 572 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 ICA1Q05084 483 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 TMEM139Q8IV31 216 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 VSTM4Q8IW00 320 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 CCDC12Q8WUD4 166 aaPredicted RBP8.5□□□□□ -1.05
SOX6-208ENST00000527619 STAG1Q8WVM7 1258 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 C17orf50Q8WW18 174 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 TCEANC2Q96MN5 208 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 PNKPQ96T60 521 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 STK31Q9BXU1 1019 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 TRIM6Q9C030 488 aaPredicted RBP8.5□□□□□ -1.05
SOX6-208ENST00000527619 FTOQ9C0B1 505 aaKnown RBP eCLIP8.5□□□□□ -1.05
SOX6-208ENST00000527619 PXDNLA1KZ92 1463 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 AP1G2O75843 785 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 SNUPNO95149 360 aaKnown RBP8.5□□□□□ -1.05
SOX6-208ENST00000527619 TOP1P11387 765 aaKnown RBP8.5□□□□□ -1.05
SOX6-208ENST00000527619 LMOD1P29536 600 aaPredicted RBP8.5□□□□□ -1.05
SOX6-208ENST00000527619 LIG3P49916 1009 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 UBASH3AP57075 661 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 GRIK3Q13003 919 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 COL9A3Q14050 684 aaPredicted RBP8.5□□□□□ -1.05
SOX6-208ENST00000527619 PLEKHO1Q53GL0 409 aaPredicted RBP8.5□□□□□ -1.05
SOX6-208ENST00000527619 NUTM2DQ5VT03 806 aaPredicted RBP8.5□□□□□ -1.05
SOX6-208ENST00000527619 ARMC3Q5W041 872 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 KCNV1Q6PIU1 500 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 PPP1R42Q7Z4L9 355 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 THEMISQ8N1K5 641 aaPredicted RBP8.5□□□□□ -1.05
SOX6-208ENST00000527619 USP28Q96RU2 1077 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 ZSWIM4Q9H7M6 989 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 FAM208AQ9UK61 1670 aaKnown RBP8.5□□□□□ -1.05
SOX6-208ENST00000527619 SPATA31D1Q6ZQQ2 1576 aa8.5□□□□□ -1.05
SOX6-208ENST00000527619 EXOC5O00471 708 aa8.49□□□□□ -1.05
SOX6-208ENST00000527619 PHACTR2O75167 634 aa8.49□□□□□ -1.05
SOX6-208ENST00000527619 WDHD1O75717 1129 aaPredicted RBP8.49□□□□□ -1.05
SOX6-208ENST00000527619 IFT88Q13099 833 aa8.49□□□□□ -1.05
SOX6-208ENST00000527619 CCDC178Q5BJE1 867 aa8.49□□□□□ -1.05
SOX6-208ENST00000527619 NAA16Q6N069 864 aaPredicted RBP8.49□□□□□ -1.05
SOX6-208ENST00000527619 POTEDQ86YR6 584 aa8.49□□□□□ -1.05
SOX6-208ENST00000527619 RBM12BQ8IXT5 1001 aaKnown RBP8.49□□□□□ -1.05
SOX6-208ENST00000527619 CDK19Q9BWU1 502 aa8.49□□□□□ -1.05
SOX6-208ENST00000527619 SUGCTQ9HAC7 445 aa8.49□□□□□ -1.05
SOX6-208ENST00000527619 A1CFQ9NQ94 594 aaKnown RBP8.49□□□□□ -1.05
SOX6-208ENST00000527619 LMTK3Q96Q04 1460 aa8.49□□□□□ -1.05
SOX6-208ENST00000527619 RNF40O75150 1001 aa8.49□□□□□ -1.05
SOX6-208ENST00000527619 SERPINC1P01008 464 aa8.49□□□□□ -1.05
SOX6-208ENST00000527619 GOLGA8FQ08AF8 430 aa8.49□□□□□ -1.05
SOX6-208ENST00000527619 GOLGA8DPQ0D2H9 430 aa8.49□□□□□ -1.05
SOX6-208ENST00000527619 TTC30BQ8N4P2 665 aa8.49□□□□□ -1.05
SOX6-208ENST00000527619 ARMC2Q8NEN0 867 aa8.49□□□□□ -1.05
SOX6-208ENST00000527619 BAG1Q99933 345 aaPredicted RBP8.49□□□□□ -1.05
SOX6-208ENST00000527619 CDCA7Q9BWT1 371 aaPredicted RBP8.49□□□□□ -1.05
SOX6-208ENST00000527619 USP44Q9H0E7 712 aa8.49□□□□□ -1.05
SOX6-208ENST00000527619 TSPYL2Q9H2G4 693 aaPredicted RBP8.49□□□□□ -1.05
SOX6-208ENST00000527619 PLSCR2Q9NRY7 297 aa8.49□□□□□ -1.05
SOX6-208ENST00000527619 SERPINA10Q9UK55 444 aa8.49□□□□□ -1.05
SOX6-208ENST00000527619 NPHP4O75161 1426 aaPredicted RBP8.49□□□□□ -1.05
SOX6-208ENST00000527619 NRKQ7Z2Y5 1582 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 A0A1W2PQ27 194 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 A0A1W2PQ64 194 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 A0A1W2PQD8 194 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 HIP1O00291 1037 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 STX10O60499 249 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 TUBBP07437 444 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 ATP1A3P13637 1013 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 RDXP35241 583 aaKnown RBP8.48□□□□□ -1.05
SOX6-208ENST00000527619 TUBB2AQ13885 445 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 CFAP100Q494V2 611 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 FBXW10Q5XX13 1052 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 ISM2Q6H9L7 571 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 GBP6Q6ZN66 633 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 TOGARAM2Q6ZUX3 1019 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 TAX1BP1Q86VP1 789 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 CTCFLQ8NI51 663 aaPredicted RBP8.48□□□□□ -1.05
SOX6-208ENST00000527619 DPF2Q92785 391 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 TUBB2BQ9BVA1 445 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 YIPF2Q9BWQ6 316 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 GNL3LQ9NVN8 582 aaKnown RBP8.48□□□□□ -1.05
SOX6-208ENST00000527619 PUF60Q9UHX1 559 aaKnown RBP8.48□□□□□ -1.05
SOX6-208ENST00000527619 CDC23Q9UJX2 597 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 SLC3A2P08195 630 aaKnown RBP8.48□□□□□ -1.05
SOX6-208ENST00000527619 ALDH1B1P30837 517 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 ELF1P32519 619 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 AARSP49588 968 aaKnown RBP eCLIP8.48□□□□□ -1.053e-6■■■■■ 61.8
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms