RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 LEMD3Q9Y2U8 911 aa13.36□□□□□ -0.27
CTNND1-217ENST00000527599 TRIM37O94972 964 aa13.35□□□□□ -0.27
CTNND1-217ENST00000527599 GRIK1P39086 918 aa13.35□□□□□ -0.27
CTNND1-217ENST00000527599 LLGL2Q6P1M3 1020 aa13.35□□□□□ -0.27
CTNND1-217ENST00000527599 SV2BQ7L1I2 683 aa13.35□□□□□ -0.27
CTNND1-217ENST00000527599 ZNF765Q7L2R6 523 aa13.35□□□□□ -0.27
CTNND1-217ENST00000527599 DTX1Q86Y01 620 aa13.35□□□□□ -0.27
CTNND1-217ENST00000527599 SMYD4Q8IYR2 804 aaPredicted RBP13.35□□□□□ -0.27
CTNND1-217ENST00000527599 GIMAP7Q8NHV1 300 aa13.35□□□□□ -0.27
CTNND1-217ENST00000527599 PIDD1Q9HB75 910 aa13.35□□□□□ -0.27
CTNND1-217ENST00000527599 SAMM50Q9Y512 469 aa13.35□□□□□ -0.27
CTNND1-217ENST00000527599 PTPN11Q06124 597 aaPredicted RBP13.34□□□□□ -0.27
CTNND1-217ENST00000527599 ACSBG1Q96GR2 724 aa13.34□□□□□ -0.27
CTNND1-217ENST00000527599 FAM161BQ96MY7 647 aa13.34□□□□□ -0.27
CTNND1-217ENST00000527599 FOSL1P15407 271 aa13.33□□□□□ -0.28
CTNND1-217ENST00000527599 ERVK-24P63145 666 aa13.33□□□□□ -0.28
CTNND1-217ENST00000527599 DAB2P98082 770 aa13.33□□□□□ -0.28
CTNND1-217ENST00000527599 CDK5R2Q13319 367 aa13.33□□□□□ -0.28
CTNND1-217ENST00000527599 CCDC27Q2M243 656 aa13.33□□□□□ -0.28
CTNND1-217ENST00000527599 CSADQ9Y600 493 aa13.33□□□□□ -0.28
CTNND1-217ENST00000527599 FGD1P98174 961 aa13.32□□□□□ -0.28
CTNND1-217ENST00000527599 MEI1Q5TIA1 1274 aa13.32□□□□□ -0.28
CTNND1-217ENST00000527599 ISL2Q96A47 359 aa13.32□□□□□ -0.28
CTNND1-217ENST00000527599 METTL22Q9BUU2 404 aaPredicted RBP13.32□□□□□ -0.28
CTNND1-217ENST00000527599 CYP8B1Q9UNU6 501 aa13.32□□□□□ -0.28
CTNND1-217ENST00000527599 RNGTTO60942 597 aaKnown RBP13.31□□□□□ -0.28
CTNND1-217ENST00000527599 NTF4P34130 210 aa13.31□□□□□ -0.28
CTNND1-217ENST00000527599 LRRC14Q15048 493 aa13.31□□□□□ -0.28
CTNND1-217ENST00000527599 CPSF6Q16630 551 aaKnown RBP eCLIP13.31□□□□□ -0.28
CTNND1-217ENST00000527599 MSMPQ1L6U9 139 aa13.31□□□□□ -0.28
CTNND1-217ENST00000527599 RNF214Q8ND24 703 aa13.31□□□□□ -0.28
CTNND1-217ENST00000527599 DCDC2CA8MYV0 355 aa13.3□□□□□ -0.28
CTNND1-217ENST00000527599 CTSHP09668 335 aa13.3□□□□□ -0.28
CTNND1-217ENST00000527599 HNRNPUQ00839 825 aaKnown RBP eCLIP13.3□□□□□ -0.28
CTNND1-217ENST00000527599 RING1Q06587 406 aa13.3□□□□□ -0.28
CTNND1-217ENST00000527599 PPM1JQ5JR12 505 aa13.3□□□□□ -0.28
CTNND1-217ENST00000527599 OGFOD3Q6PK18 319 aa13.3□□□□□ -0.28
CTNND1-217ENST00000527599 C12orf40Q86WS4 652 aa13.3□□□□□ -0.28
CTNND1-217ENST00000527599 UBE3DQ7Z6J8 389 aa13.29□□□□□ -0.28
CTNND1-217ENST00000527599 GAL3ST3Q96A11 431 aa13.29□□□□□ -0.28
CTNND1-217ENST00000527599 PCDHA4Q9UN74 947 aa13.29□□□□□ -0.28
CTNND1-217ENST00000527599 CYP26A1O43174 497 aa13.28□□□□□ -0.28
CTNND1-217ENST00000527599 PSMD2Q13200 908 aa13.28□□□□□ -0.28
CTNND1-217ENST00000527599 CCDC85BQ15834 202 aaPredicted RBP13.28□□□□□ -0.28
CTNND1-217ENST00000527599 SCARA3Q6AZY7 606 aa13.28□□□□□ -0.28
CTNND1-217ENST00000527599 TTBK2Q6IQ55 1244 aa13.28□□□□□ -0.28
CTNND1-217ENST00000527599 TMC4Q7Z404 712 aa13.28□□□□□ -0.28
CTNND1-217ENST00000527599 PSMG3-AS1Q96PY0 264 aa13.28□□□□□ -0.28
CTNND1-217ENST00000527599 PCOLCE2Q9UKZ9 415 aa13.28□□□□□ -0.28
CTNND1-217ENST00000527599 INPP5AQ14642 412 aa13.27□□□□□ -0.29
CTNND1-217ENST00000527599 DUSP27Q5VZP5 1158 aa13.26□□□□□ -0.29
CTNND1-217ENST00000527599 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.26□□□□□ -0.29
CTNND1-217ENST00000527599 LRRC4CQ9HCJ2 640 aa13.26□□□□□ -0.29
CTNND1-217ENST00000527599 LEFTY1O75610 366 aa13.25□□□□□ -0.29
CTNND1-217ENST00000527599 FAM87AP0C7U9 286 aa13.25□□□□□ -0.29
CTNND1-217ENST00000527599 CDK8P49336 464 aa13.25□□□□□ -0.29
CTNND1-217ENST00000527599 CYP27A1Q02318 531 aa13.25□□□□□ -0.29
CTNND1-217ENST00000527599 LRFN4Q6PJG9 635 aa13.25□□□□□ -0.29
CTNND1-217ENST00000527599 PCDHB5Q9Y5E4 795 aa13.25□□□□□ -0.29
CTNND1-217ENST00000527599 ZBTB37Q5TC79 503 aa13.24□□□□□ -0.29
CTNND1-217ENST00000527599 NFXL1Q6ZNB6 911 aa13.24□□□□□ -0.29
CTNND1-217ENST00000527599 ZC3H7BQ9UGR2 993 aaKnown RBP13.24□□□□□ -0.29
CTNND1-217ENST00000527599 U3KQE9 123 aa13.24□□□□□ -0.29
CTNND1-217ENST00000527599 XPCQ01831 940 aaPredicted RBP13.23□□□□□ -0.29
CTNND1-217ENST00000527599 MAP3K11Q16584 847 aa13.23□□□□□ -0.29
CTNND1-217ENST00000527599 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.23□□□□□ -0.29
CTNND1-217ENST00000527599 OAS3Q9Y6K5 1087 aaKnown RBP13.23□□□□□ -0.29
CTNND1-217ENST00000527599 ERCC3P19447 782 aa13.22□□□□□ -0.29
CTNND1-217ENST00000527599 DUSP23Q9BVJ7 150 aa13.22□□□□□ -0.29
CTNND1-217ENST00000527599 SSU72Q9NP77 194 aaKnown RBP13.22□□□□□ -0.29
CTNND1-217ENST00000527599 LIG3P49916 1009 aa13.21□□□□□ -0.29
CTNND1-217ENST00000527599 GP2P55259 537 aaKnown RBP13.21□□□□□ -0.29
CTNND1-217ENST00000527599 RPS26P62854 115 aaKnown RBP13.21□□□□□ -0.29
CTNND1-217ENST00000527599 AGMOQ6ZNB7 445 aa13.21□□□□□ -0.29
CTNND1-217ENST00000527599 CYFIP1Q7L576 1253 aa13.21□□□□□ -0.29
CTNND1-217ENST00000527599 PLPPR2Q96GM1 343 aa13.21□□□□□ -0.29
CTNND1-217ENST00000527599 USP31Q70CQ4 1352 aa13.2□□□□□ -0.3
CTNND1-217ENST00000527599 PRNPP04156 253 aa13.2□□□□□ -0.3
CTNND1-217ENST00000527599 SEPT6Q14141 434 aa13.2□□□□□ -0.3
CTNND1-217ENST00000527599 TAF1CQ15572 869 aaPredicted RBP13.2□□□□□ -0.3
CTNND1-217ENST00000527599 CCDC39Q9UFE4 941 aa13.2□□□□□ -0.3
CTNND1-217ENST00000527599 FANCGO15287 622 aa13.19□□□□□ -0.3
CTNND1-217ENST00000527599 WNT11O96014 354 aa13.19□□□□□ -0.3
CTNND1-217ENST00000527599 ELMO3Q96BJ8 720 aa13.19□□□□□ -0.3
CTNND1-217ENST00000527599 TFE3P19532 575 aaPredicted RBP13.18□□□□□ -0.3
CTNND1-217ENST00000527599 ST13P50502 369 aaKnown RBP13.18□□□□□ -0.3
CTNND1-217ENST00000527599 CYP27C1Q4G0S4 372 aa13.18□□□□□ -0.3
CTNND1-217ENST00000527599 TOP6BLQ8N6T0 577 aa13.18□□□□□ -0.3
CTNND1-217ENST00000527599 FAM181AQ8N9Y4 354 aa13.17□□□□□ -0.3
CTNND1-217ENST00000527599 PICK1Q9NRD5 415 aa13.17□□□□□ -0.3
CTNND1-217ENST00000527599 TLR6Q9Y2C9 796 aa13.17□□□□□ -0.3
CTNND1-217ENST00000527599 SORBS3O60504 671 aa13.16□□□□□ -0.3
CTNND1-217ENST00000527599 WIPI1Q5MNZ9 446 aaPredicted RBP13.16□□□□□ -0.3
CTNND1-217ENST00000527599 FAM214BQ7L5A3 538 aa13.16□□□□□ -0.3
CTNND1-217ENST00000527599 NOC4LQ9BVI4 516 aaKnown RBP13.16□□□□□ -0.3
CTNND1-217ENST00000527599 FBRSQ9HAH7 460 aa13.16□□□□□ -0.3
CTNND1-217ENST00000527599 BSDC1Q9NW68 430 aaPredicted RBP13.16□□□□□ -0.3
CTNND1-217ENST00000527599 PRAMEF27A3QJZ7 478 aa13.15□□□□□ -0.3
CTNND1-217ENST00000527599 HDXQ7Z353 690 aa13.15□□□□□ -0.3
CTNND1-217ENST00000527599 GFRA2O00451 464 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms