RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 RHBDL3P58872 404 aa19.72■□□□□ 0.75
CTSB-213ENST00000527215 AACSQ86V21 672 aa19.72■□□□□ 0.75
CTSB-213ENST00000527215 RHPN1Q8TCX5 695 aa19.72■□□□□ 0.75
CTSB-213ENST00000527215 CFHR5Q9BXR6 569 aa19.72■□□□□ 0.75
CTSB-213ENST00000527215 IL1RAPL2Q9NP60 686 aa19.72■□□□□ 0.75
CTSB-213ENST00000527215 DDX4Q9NQI0 724 aaKnown RBP19.72■□□□□ 0.75
CTSB-213ENST00000527215 SPDYE5A6NIY4 337 aa19.71■□□□□ 0.75
CTSB-213ENST00000527215 APBB1O00213 710 aa19.71■□□□□ 0.75
CTSB-213ENST00000527215 PICALMQ13492 652 aa19.71■□□□□ 0.75
CTSB-213ENST00000527215 PKN2Q16513 984 aaKnown RBP19.71■□□□□ 0.75
CTSB-213ENST00000527215 NOM1Q5C9Z4 860 aaKnown RBP19.71■□□□□ 0.75
CTSB-213ENST00000527215 MS4A4AQ96JQ5 239 aa19.71■□□□□ 0.75
CTSB-213ENST00000527215 R3HDMLQ9H3Y0 253 aa19.71■□□□□ 0.75
CTSB-213ENST00000527215 SIPA1L1O43166 1804 aa19.71■□□□□ 0.75
CTSB-213ENST00000527215 PHIPQ8WWQ0 1821 aa19.71■□□□□ 0.75
CTSB-213ENST00000527215 ATRNL1Q5VV63 1379 aa19.7■□□□□ 0.74
CTSB-213ENST00000527215 TESPA1A2RU30 521 aaPredicted RBP19.7■□□□□ 0.74
CTSB-213ENST00000527215 GPR25O00155 361 aa19.7■□□□□ 0.74
CTSB-213ENST00000527215 INPP5BP32019 993 aa19.7■□□□□ 0.74
CTSB-213ENST00000527215 NAA16Q6N069 864 aaPredicted RBP19.7■□□□□ 0.74
CTSB-213ENST00000527215 SH3BP5LQ7L8J4 393 aa19.7■□□□□ 0.74
CTSB-213ENST00000527215 ERO1BQ86YB8 467 aa19.7■□□□□ 0.74
CTSB-213ENST00000527215 ZSCAN29Q8IWY8 852 aaPredicted RBP19.7■□□□□ 0.74
CTSB-213ENST00000527215 ZNF296Q8WUU4 475 aaPredicted RBP19.7■□□□□ 0.74
CTSB-213ENST00000527215 PTPN18Q99952 460 aa19.7■□□□□ 0.74
CTSB-213ENST00000527215 PIH1D3Q9NQM4 214 aaKnown RBP19.7■□□□□ 0.74
CTSB-213ENST00000527215 ZNF112Q9UJU3 913 aa19.7■□□□□ 0.74
CTSB-213ENST00000527215 PTPRFP10586 1907 aa19.7■□□□□ 0.74
CTSB-213ENST00000527215 MYH1P12882 1939 aa19.7■□□□□ 0.74
CTSB-213ENST00000527215 DDTLA6NHG4 134 aaPredicted RBP19.69■□□□□ 0.74
CTSB-213ENST00000527215 GTF2A2P52657 109 aa19.69■□□□□ 0.74
CTSB-213ENST00000527215 OTUD7BQ6GQQ9 843 aa19.69■□□□□ 0.74
CTSB-213ENST00000527215 KIF1BPQ96EK5 621 aa19.69■□□□□ 0.74
CTSB-213ENST00000527215 MYH7P12883 1935 aa19.68■□□□□ 0.74
CTSB-213ENST00000527215 CCL15-CCL14A0A0B4J2E2 113 aa19.68■□□□□ 0.74
CTSB-213ENST00000527215 MAP4K4O95819 1239 aaPredicted RBP19.68■□□□□ 0.74
CTSB-213ENST00000527215 CCL15Q16663 113 aa19.68■□□□□ 0.74
CTSB-213ENST00000527215 BRI3BPQ8WY22 251 aa19.68■□□□□ 0.74
CTSB-213ENST00000527215 NOL10Q9BSC4 688 aaKnown RBP19.68■□□□□ 0.74
CTSB-213ENST00000527215 NDUFB9Q9Y6M9 179 aa19.68■□□□□ 0.74
CTSB-213ENST00000527215 NPM3O75607 178 aaKnown RBP19.67■□□□□ 0.74
CTSB-213ENST00000527215 PPIL2Q13356 520 aa19.67■□□□□ 0.74
CTSB-213ENST00000527215 ADGRA1Q86SQ6 560 aa19.67■□□□□ 0.74
CTSB-213ENST00000527215 CLASRPQ8N2M8 674 aaKnown RBP19.67■□□□□ 0.74
CTSB-213ENST00000527215 YTHDC1Q96MU7 727 aaKnown RBP19.67■□□□□ 0.74
CTSB-213ENST00000527215 AATFQ9NY61 560 aaKnown RBP eCLIP19.67■□□□□ 0.74
CTSB-213ENST00000527215 COL2A1P02458 1487 aaPredicted RBP19.67■□□□□ 0.74
CTSB-213ENST00000527215 IRF6O14896 467 aa19.66■□□□□ 0.74
CTSB-213ENST00000527215 FKTNO75072 461 aa19.66■□□□□ 0.74
CTSB-213ENST00000527215 RAB11FIP3O75154 756 aa19.66■□□□□ 0.74
CTSB-213ENST00000527215 SLURP2P0DP57 97 aa19.66■□□□□ 0.74
CTSB-213ENST00000527215 NOL9Q5SY16 702 aaKnown RBP19.66■□□□□ 0.74
CTSB-213ENST00000527215 TEX11Q8IYF3 940 aa19.66■□□□□ 0.74
CTSB-213ENST00000527215 SH3RF3Q8TEJ3 882 aaPredicted RBP19.66■□□□□ 0.74
CTSB-213ENST00000527215 BCL11AQ9H165 835 aa19.66■□□□□ 0.74
CTSB-213ENST00000527215 PHF20L1A8MW92 1017 aa19.65■□□□□ 0.74
CTSB-213ENST00000527215 IGSF3O75054 1194 aa19.65■□□□□ 0.74
CTSB-213ENST00000527215 BAG3O95817 575 aa19.65■□□□□ 0.74
CTSB-213ENST00000527215 SOX10P56693 466 aa19.65■□□□□ 0.74
CTSB-213ENST00000527215 PPATQ06203 517 aa19.65■□□□□ 0.74
CTSB-213ENST00000527215 CRHR2Q13324 411 aa19.65■□□□□ 0.74
CTSB-213ENST00000527215 ANTXR1Q9H6X2 564 aa19.65■□□□□ 0.74
CTSB-213ENST00000527215 HPS5Q9UPZ3 1129 aa19.65■□□□□ 0.74
CTSB-213ENST00000527215 IDH1O75874 414 aaKnown RBP19.64■□□□□ 0.73
CTSB-213ENST00000527215 IFIT2P09913 472 aaKnown RBP19.64■□□□□ 0.73
CTSB-213ENST00000527215 CETPP11597 493 aa19.64■□□□□ 0.73
CTSB-213ENST00000527215 MAP3K10Q02779 954 aa19.64■□□□□ 0.73
CTSB-213ENST00000527215 SNAPC2Q13487 334 aa19.64■□□□□ 0.73
CTSB-213ENST00000527215 FAM43AQ8N2R8 423 aa19.64■□□□□ 0.73
CTSB-213ENST00000527215 OSBPL5Q9H0X9 879 aaPredicted RBP19.64■□□□□ 0.73
CTSB-213ENST00000527215 NAV1Q8NEY1 1877 aa19.63■□□□□ 0.73
CTSB-213ENST00000527215 PLCG2P16885 1265 aa19.63■□□□□ 0.73
CTSB-213ENST00000527215 PPP4CP60510 307 aa19.63■□□□□ 0.73
CTSB-213ENST00000527215 SCYL3Q8IZE3 742 aa19.63■□□□□ 0.73
CTSB-213ENST00000527215 ZSWIM8A7E2V4 1837 aa19.62■□□□□ 0.73
CTSB-213ENST00000527215 CYP7A1P22680 504 aa19.62■□□□□ 0.73
CTSB-213ENST00000527215 TAF1CQ15572 869 aaPredicted RBP19.62■□□□□ 0.73
CTSB-213ENST00000527215 FBXO46Q6PJ61 603 aaPredicted RBP19.62■□□□□ 0.73
CTSB-213ENST00000527215 MAGEB6Q8N7X4 407 aa19.62■□□□□ 0.73
CTSB-213ENST00000527215 FAM196BA6NMK8 535 aa19.61■□□□□ 0.73
CTSB-213ENST00000527215 TBC1D12O60347 775 aa19.61■□□□□ 0.73
CTSB-213ENST00000527215 RRP1P56182 461 aaKnown RBP19.61■□□□□ 0.73
CTSB-213ENST00000527215 DYNLL1P63167 89 aaKnown RBP19.61■□□□□ 0.73
CTSB-213ENST00000527215 TGFBRAP1Q8WUH2 860 aa19.61■□□□□ 0.73
CTSB-213ENST00000527215 KCNH4Q9UQ05 1017 aa19.61■□□□□ 0.73
CTSB-213ENST00000527215 DDX60LQ5H9U9 1706 aaKnown RBP19.6■□□□□ 0.73
CTSB-213ENST00000527215 FLT1P17948 1338 aa19.6■□□□□ 0.73
CTSB-213ENST00000527215 BTBD19C9JJ37 291 aa19.6■□□□□ 0.73
CTSB-213ENST00000527215 MAP3K12Q12852 859 aa19.6■□□□□ 0.73
CTSB-213ENST00000527215 MAPKAPK5Q8IW41 473 aa19.6■□□□□ 0.73
CTSB-213ENST00000527215 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.6■□□□□ 0.73
CTSB-213ENST00000527215 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.6■□□□□ 0.733e-7■□□□□ 9.8
CTSB-213ENST00000527215 ZFYVE28Q9HCC9 887 aa19.6■□□□□ 0.73
CTSB-213ENST00000527215 PICK1Q9NRD5 415 aa19.6■□□□□ 0.73
CTSB-213ENST00000527215 CTNND1O60716 968 aaKnown RBP19.59■□□□□ 0.73
CTSB-213ENST00000527215 PTPRAP18433 802 aa19.59■□□□□ 0.73
CTSB-213ENST00000527215 TTF1Q15361 905 aaPredicted RBP19.59■□□□□ 0.73
CTSB-213ENST00000527215 MIGA1Q8NAN2 632 aa19.59■□□□□ 0.73
CTSB-213ENST00000527215 DNAJC2Q99543 621 aaKnown RBP19.59■□□□□ 0.73
CTSB-213ENST00000527215 LRRCC1Q9C099 1032 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms