RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 TTC41PQ6P2S7 1318 aa17.47■□□□□ 0.39
NXF1-204ENST00000527064 MYO5AQ9Y4I1 1855 aaKnown RBP17.46■□□□□ 0.39
NXF1-204ENST00000527064 ATRNL1Q5VV63 1379 aa17.46■□□□□ 0.39
NXF1-204ENST00000527064 ERC2O15083 957 aa17.46■□□□□ 0.39
NXF1-204ENST00000527064 ZBTB48P10074 688 aaPredicted RBP17.46■□□□□ 0.39
NXF1-204ENST00000527064 KIF23Q02241 960 aaPredicted RBP17.46■□□□□ 0.39
NXF1-204ENST00000527064 SLC9C2Q5TAH2 1124 aa17.46■□□□□ 0.39
NXF1-204ENST00000527064 ADGRA1Q86SQ6 560 aa17.46■□□□□ 0.39
NXF1-204ENST00000527064 SH3RF3Q8TEJ3 882 aaPredicted RBP17.46■□□□□ 0.39
NXF1-204ENST00000527064 WRNIP1Q96S55 665 aa17.46■□□□□ 0.39
NXF1-204ENST00000527064 DDX4Q9NQI0 724 aaKnown RBP17.46■□□□□ 0.39
NXF1-204ENST00000527064 PDE6AP16499 860 aa17.45■□□□□ 0.38
NXF1-204ENST00000527064 MAP3K9P80192 1104 aa17.45■□□□□ 0.38
NXF1-204ENST00000527064 ANKRD45Q5TZF3 282 aa17.45■□□□□ 0.38
NXF1-204ENST00000527064 ZFPM1Q8IX07 1006 aa17.45■□□□□ 0.38
NXF1-204ENST00000527064 CLMNQ96JQ2 1002 aa17.45■□□□□ 0.38
NXF1-204ENST00000527064 OSBPL5Q9H0X9 879 aaPredicted RBP17.45■□□□□ 0.38
NXF1-204ENST00000527064 MX1P20591 662 aa17.44■□□□□ 0.38
NXF1-204ENST00000527064 CTCFP49711 727 aaPredicted RBP17.44■□□□□ 0.38
NXF1-204ENST00000527064 SREBF2Q12772 1141 aa17.44■□□□□ 0.38
NXF1-204ENST00000527064 VGLL4Q14135 290 aa17.44■□□□□ 0.38
NXF1-204ENST00000527064 SPRYD7Q5W111 196 aa17.44■□□□□ 0.38
NXF1-204ENST00000527064 ZSCAN25Q6NSZ9 544 aa17.44■□□□□ 0.38
NXF1-204ENST00000527064 MIGA2Q7L4E1 593 aa17.44■□□□□ 0.38
NXF1-204ENST00000527064 MIGA1Q8NAN2 632 aa17.44■□□□□ 0.38
NXF1-204ENST00000527064 WNK4Q96J92 1243 aa17.44■□□□□ 0.38
NXF1-204ENST00000527064 AK9Q5TCS8 1911 aa17.43■□□□□ 0.38
NXF1-204ENST00000527064 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.43■□□□□ 0.38
NXF1-204ENST00000527064 SMC5Q8IY18 1101 aa17.43■□□□□ 0.38
NXF1-204ENST00000527064 EDC3Q96F86 508 aaKnown RBP17.43■□□□□ 0.38
NXF1-204ENST00000527064 ZIC5Q96T25 663 aa17.43■□□□□ 0.38
NXF1-204ENST00000527064 DHX36Q9H2U1 1008 aaKnown RBP17.43■□□□□ 0.38
NXF1-204ENST00000527064 ELP3Q9H9T3 547 aa17.43■□□□□ 0.38
NXF1-204ENST00000527064 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.43■□□□□ 0.38
NXF1-204ENST00000527064 FLT1P17948 1338 aa17.43■□□□□ 0.38
NXF1-204ENST00000527064 ZNF532Q9HCE3 1301 aa17.43■□□□□ 0.38
NXF1-204ENST00000527064 FOCADQ5VW36 1801 aa17.42■□□□□ 0.38
NXF1-204ENST00000527064 MAGEB6P1A0A0J9YX57 407 aa17.42■□□□□ 0.38
NXF1-204ENST00000527064 DDTLA6NHG4 134 aaPredicted RBP17.42■□□□□ 0.38
NXF1-204ENST00000527064 MANSC4A6NHS7 340 aaPredicted RBP17.42■□□□□ 0.38
NXF1-204ENST00000527064 FOXN1O15353 648 aa17.42■□□□□ 0.38
NXF1-204ENST00000527064 GLRX3O76003 335 aaKnown RBP17.42■□□□□ 0.38
NXF1-204ENST00000527064 IRX6P78412 446 aaPredicted RBP17.42■□□□□ 0.38
NXF1-204ENST00000527064 MKRN3Q13064 507 aaKnown RBP17.42■□□□□ 0.38
NXF1-204ENST00000527064 TSHZ3Q63HK5 1081 aa17.42■□□□□ 0.38
NXF1-204ENST00000527064 SH3BP5LQ7L8J4 393 aa17.42■□□□□ 0.38
NXF1-204ENST00000527064 TGFBRAP1Q8WUH2 860 aa17.42■□□□□ 0.38
NXF1-204ENST00000527064 SAGE1Q9NXZ1 904 aa17.42■□□□□ 0.38
NXF1-204ENST00000527064 ADD2P35612 726 aa17.41■□□□□ 0.38
NXF1-204ENST00000527064 USP5P45974 858 aa17.41■□□□□ 0.38
NXF1-204ENST00000527064 DYNLL1P63167 89 aaKnown RBP17.41■□□□□ 0.38
NXF1-204ENST00000527064 LRRFIP1Q32MZ4 808 aaKnown RBP17.41■□□□□ 0.38
NXF1-204ENST00000527064 MAPKAPK5Q8IW41 473 aa17.41■□□□□ 0.38
NXF1-204ENST00000527064 OPTNQ96CV9 577 aa17.41■□□□□ 0.38
NXF1-204ENST00000527064 ZNF112Q9UJU3 913 aa17.41■□□□□ 0.38
NXF1-204ENST00000527064 LAMB1P07942 1786 aa17.4■□□□□ 0.38
NXF1-204ENST00000527064 TCRBV5S4A2TA0A5A2 114 aa17.4■□□□□ 0.38
NXF1-204ENST00000527064 TBC1D12O60347 775 aa17.4■□□□□ 0.38
NXF1-204ENST00000527064 INHBEP58166 350 aa17.4■□□□□ 0.38
NXF1-204ENST00000527064 MAP3K10Q02779 954 aa17.4■□□□□ 0.38
NXF1-204ENST00000527064 UBE3CQ15386 1083 aa17.4■□□□□ 0.38
NXF1-204ENST00000527064 NOL9Q5SY16 702 aaKnown RBP17.4■□□□□ 0.38
NXF1-204ENST00000527064 ERO1BQ86YB8 467 aa17.4■□□□□ 0.38
NXF1-204ENST00000527064 RIOK1Q9BRS2 568 aaKnown RBP17.4■□□□□ 0.38
NXF1-204ENST00000527064 SNCAIPQ9Y6H5 919 aa17.4■□□□□ 0.38
NXF1-204ENST00000527064 CDK5RAP2Q96SN8 1893 aa17.39■□□□□ 0.38
NXF1-204ENST00000527064 MYH7P12883 1935 aa17.39■□□□□ 0.37
NXF1-204ENST00000527064 SPDYE5A6NIY4 337 aa17.39■□□□□ 0.37
NXF1-204ENST00000527064 IGHDP01880 384 aa17.39■□□□□ 0.37
NXF1-204ENST00000527064 HLA-DOAP06340 250 aa17.39■□□□□ 0.37
NXF1-204ENST00000527064 TM4SF4P48230 202 aa17.39■□□□□ 0.37
NXF1-204ENST00000527064 KBTBD3Q8NAB2 608 aa17.39■□□□□ 0.37
NXF1-204ENST00000527064 PI4K2BQ8TCG2 481 aa17.39■□□□□ 0.37
NXF1-204ENST00000527064 OTUD7AQ8TE49 926 aaPredicted RBP17.39■□□□□ 0.37
NXF1-204ENST00000527064 ZKSCAN4Q969J2 545 aaPredicted RBP17.39■□□□□ 0.37
NXF1-204ENST00000527064 CRNKL1Q9BZJ0 848 aaKnown RBP17.39■□□□□ 0.37
NXF1-204ENST00000527064 PI4KBQ9UBF8 816 aa17.39■□□□□ 0.37
NXF1-204ENST00000527064 HERC5Q9UII4 1024 aaKnown RBP17.39■□□□□ 0.37
NXF1-204ENST00000527064 SALL3Q9BXA9 1300 aa17.39■□□□□ 0.37
NXF1-204ENST00000527064 ZFYP08048 801 aaPredicted RBP17.38■□□□□ 0.37
NXF1-204ENST00000527064 HSPA8P11142 646 aaKnown RBP17.38■□□□□ 0.37
NXF1-204ENST00000527064 INPP5BP32019 993 aa17.38■□□□□ 0.37
NXF1-204ENST00000527064 B4GALNT3Q6L9W6 998 aa17.38■□□□□ 0.37
NXF1-204ENST00000527064 OTUD5Q96G74 571 aa17.38■□□□□ 0.37
NXF1-204ENST00000527064 TRIM34Q9BYJ4 488 aa17.38■□□□□ 0.37
NXF1-204ENST00000527064 LNPKQ9C0E8 428 aa17.38■□□□□ 0.37
NXF1-204ENST00000527064 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.38■□□□□ 0.37
NXF1-204ENST00000527064 PHF20L1A8MW92 1017 aa17.37■□□□□ 0.37
NXF1-204ENST00000527064 CTNND1O60716 968 aaKnown RBP17.37■□□□□ 0.37
NXF1-204ENST00000527064 ALDH1A1P00352 501 aa17.37■□□□□ 0.37
NXF1-204ENST00000527064 GJA5P36382 358 aa17.37■□□□□ 0.37
NXF1-204ENST00000527064 GTF2A2P52657 109 aa17.37■□□□□ 0.37
NXF1-204ENST00000527064 NUCB1Q02818 461 aa17.37■□□□□ 0.37
NXF1-204ENST00000527064 PPATQ06203 517 aa17.37■□□□□ 0.37
NXF1-204ENST00000527064 PPIL2Q13356 520 aa17.37■□□□□ 0.37
NXF1-204ENST00000527064 CHD1LQ86WJ1 897 aa17.37■□□□□ 0.37
NXF1-204ENST00000527064 SCYL3Q8IZE3 742 aa17.37■□□□□ 0.37
NXF1-204ENST00000527064 PRDM10Q9NQV6 1147 aa17.37■□□□□ 0.37
NXF1-204ENST00000527064 PICK1Q9NRD5 415 aa17.37■□□□□ 0.37
NXF1-204ENST00000527064 RNF186Q9NXI6 227 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms