RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 SHISA4Q96DD7 197 aa23.28■■□□□ 1.32
CAPN1-206ENST00000526966 FAM163AQ96GL9 167 aaPredicted RBP23.28■■□□□ 1.32
CAPN1-206ENST00000526966 MEIS3Q99687 375 aa23.28■■□□□ 1.32
CAPN1-206ENST00000526966 A0A0G2JLL6 359 aaPredicted RBP23.27■■□□□ 1.32
CAPN1-206ENST00000526966 ECM2O94769 699 aaPredicted RBP23.27■■□□□ 1.32
CAPN1-206ENST00000526966 MTFR1Q15390 333 aa23.27■■□□□ 1.32
CAPN1-206ENST00000526966 PRRT2Q7Z6L0 340 aaPredicted RBP23.27■■□□□ 1.32
CAPN1-206ENST00000526966 MYPNQ86TC9 1320 aa23.27■■□□□ 1.32
CAPN1-206ENST00000526966 FMNL1O95466 1100 aaPredicted RBP23.26■■□□□ 1.31
CAPN1-206ENST00000526966 PTPRAP18433 802 aa23.26■■□□□ 1.31
CAPN1-206ENST00000526966 GRK4P32298 578 aa23.26■■□□□ 1.31
CAPN1-206ENST00000526966 DZIP1Q86YF9 867 aaKnown RBP23.26■■□□□ 1.31
CAPN1-206ENST00000526966 CYP2C8P10632 490 aa23.25■■□□□ 1.31
CAPN1-206ENST00000526966 FXR1P51114 621 aaKnown RBP eCLIP23.25■■□□□ 1.31
CAPN1-206ENST00000526966 MTX1Q13505 466 aa23.25■■□□□ 1.31
CAPN1-206ENST00000526966 SLF2Q8IX21 1173 aa23.25■■□□□ 1.31
CAPN1-206ENST00000526966 RAET1EQ8TD07 263 aa23.25■■□□□ 1.31
CAPN1-206ENST00000526966 DDX4Q9NQI0 724 aaKnown RBP23.25■■□□□ 1.31
CAPN1-206ENST00000526966 AFG3L2Q9Y4W6 797 aa23.25■■□□□ 1.31
CAPN1-206ENST00000526966 ZHX2Q9Y6X8 837 aa23.25■■□□□ 1.31
CAPN1-206ENST00000526966 A0A1B0GUL7 405 aa23.24■■□□□ 1.31
CAPN1-206ENST00000526966 DDTLA6NHG4 134 aaPredicted RBP23.24■■□□□ 1.31
CAPN1-206ENST00000526966 TIMM10P62072 90 aa23.24■■□□□ 1.31
CAPN1-206ENST00000526966 FASTKD5Q7L8L6 764 aaKnown RBP23.24■■□□□ 1.31
CAPN1-206ENST00000526966 PICK1Q9NRD5 415 aa23.24■■□□□ 1.31
CAPN1-206ENST00000526966 ABCF2Q9UG63 623 aa23.24■■□□□ 1.31
CAPN1-206ENST00000526966 SLC45A1Q9Y2W3 748 aa23.24■■□□□ 1.31
CAPN1-206ENST00000526966 DOCK3Q8IZD9 2030 aa23.24■■□□□ 1.31
CAPN1-206ENST00000526966 MROH7-TTC4A0A0A0MT08 1334 aa23.24■■□□□ 1.31
CAPN1-206ENST00000526966 ATAD5Q96QE3 1844 aa23.24■■□□□ 1.31
CAPN1-206ENST00000526966 BTDP43251 543 aa23.23■■□□□ 1.31
CAPN1-206ENST00000526966 FCGRTP55899 365 aa23.23■■□□□ 1.31
CAPN1-206ENST00000526966 SPTY2D1Q68D10 685 aaPredicted RBP23.23■■□□□ 1.31
CAPN1-206ENST00000526966 XAGE2Q96GT9 111 aa23.23■■□□□ 1.31
CAPN1-206ENST00000526966 COLQQ9Y215 455 aaPredicted RBP23.23■■□□□ 1.31
CAPN1-206ENST00000526966 CTNND1O60716 968 aaKnown RBP23.22■■□□□ 1.31
CAPN1-206ENST00000526966 RARSP54136 660 aaKnown RBP23.22■■□□□ 1.31
CAPN1-206ENST00000526966 PRKCZQ05513 592 aa23.22■■□□□ 1.31
CAPN1-206ENST00000526966 ZSCAN29Q8IWY8 852 aaPredicted RBP23.22■■□□□ 1.31
CAPN1-206ENST00000526966 NKX2-3Q8TAU0 364 aa23.22■■□□□ 1.31
CAPN1-206ENST00000526966 ZNF384Q8TF68 577 aa23.22■■□□□ 1.31
CAPN1-206ENST00000526966 ARHGAP45Q92619 1136 aa23.22■■□□□ 1.31
CAPN1-206ENST00000526966 AKAP2Q9Y2D5 859 aa23.22■■□□□ 1.31
CAPN1-206ENST00000526966 LOC285556D6RIA3 1793 aa23.22■■□□□ 1.31
CAPN1-206ENST00000526966 RANBP2P49792 3224 aaKnown RBP23.21■■□□□ 1.31
CAPN1-206ENST00000526966 GPR75-ASB3A0A0A6YYF3 556 aa23.21■■□□□ 1.31
CAPN1-206ENST00000526966 H0YGN5 161 aa23.21■■□□□ 1.31
CAPN1-206ENST00000526966 SRGAP3O43295 1099 aa23.21■■□□□ 1.31
CAPN1-206ENST00000526966 GJB1P08034 283 aa23.21■■□□□ 1.31
CAPN1-206ENST00000526966 GNAI3P08754 354 aa23.21■■□□□ 1.31
CAPN1-206ENST00000526966 SLURP2P0DP57 97 aa23.21■■□□□ 1.31
CAPN1-206ENST00000526966 GJA8P48165 433 aa23.21■■□□□ 1.31
CAPN1-206ENST00000526966 RHBDL3P58872 404 aa23.21■■□□□ 1.31
CAPN1-206ENST00000526966 TFCP2Q12800 502 aa23.21■■□□□ 1.31
CAPN1-206ENST00000526966 MVPQ14764 893 aaKnown RBP23.21■■□□□ 1.31
CAPN1-206ENST00000526966 UBE2Q1Q7Z7E8 422 aa23.21■■□□□ 1.31
CAPN1-206ENST00000526966 COL2A1P02458 1487 aaPredicted RBP23.2■■□□□ 1.3
CAPN1-206ENST00000526966 NPM3O75607 178 aaKnown RBP23.2■■□□□ 1.3
CAPN1-206ENST00000526966 CCL5P13501 91 aa23.2■■□□□ 1.3
CAPN1-206ENST00000526966 MECOMQ03112 1051 aa23.2■■□□□ 1.3
CAPN1-206ENST00000526966 PICALMQ13492 652 aa23.2■■□□□ 1.3
CAPN1-206ENST00000526966 SLAIN1Q8ND83 568 aa23.2■■□□□ 1.3
CAPN1-206ENST00000526966 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.2■■□□□ 1.3
CAPN1-206ENST00000526966 TBC1D12O60347 775 aa23.19■■□□□ 1.3
CAPN1-206ENST00000526966 GADL1Q6ZQY3 521 aa23.19■■□□□ 1.3
CAPN1-206ENST00000526966 ERICH6Q7L0X2 663 aa23.19■■□□□ 1.3
CAPN1-206ENST00000526966 GABRQQ9UN88 632 aa23.19■■□□□ 1.3
CAPN1-206ENST00000526966 UBXN2AP68543 259 aa23.18■■□□□ 1.3
CAPN1-206ENST00000526966 HMG20BQ9P0W2 317 aa23.18■■□□□ 1.3
CAPN1-206ENST00000526966 RNF208Q9H0X6 261 aa23.17■■□□□ 1.3
CAPN1-206ENST00000526966 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.17■■□□□ 1.3
CAPN1-206ENST00000526966 AGTPBP1Q9UPW5 1226 aa23.17■■□□□ 1.3
CAPN1-206ENST00000526966 SIPA1L1O43166 1804 aa23.17■■□□□ 1.3
CAPN1-206ENST00000526966 MAST2Q6P0Q8 1798 aa23.17■■□□□ 1.3
CAPN1-206ENST00000526966 CDK5RAP2Q96SN8 1893 aa23.16■■□□□ 1.3
CAPN1-206ENST00000526966 TRIM75PA6NK02 468 aa23.16■■□□□ 1.3
CAPN1-206ENST00000526966 MAP4K4O95819 1239 aaPredicted RBP23.16■■□□□ 1.3
CAPN1-206ENST00000526966 PI16Q6UXB8 463 aa23.16■■□□□ 1.3
CAPN1-206ENST00000526966 NSUN4Q96CB9 384 aaKnown RBP23.16■■□□□ 1.3
CAPN1-206ENST00000526966 BIN2Q9UBW5 565 aaPredicted RBP23.16■■□□□ 1.3
CAPN1-206ENST00000526966 SZT2Q5T011 3432 aa23.16■■□□□ 1.3
CAPN1-206ENST00000526966 ARID4AP29374 1257 aaPredicted RBP23.15■■□□□ 1.3
CAPN1-206ENST00000526966 FLT3LGP49771 235 aa23.15■■□□□ 1.3
CAPN1-206ENST00000526966 IRF5Q13568 498 aa23.15■■□□□ 1.3
CAPN1-206ENST00000526966 CCDC84Q86UT8 332 aaPredicted RBP23.15■■□□□ 1.3
CAPN1-206ENST00000526966 SPATA5Q8NB90 893 aa23.15■■□□□ 1.3
CAPN1-206ENST00000526966 SMCR8Q8TEV9 937 aaPredicted RBP23.15■■□□□ 1.3
CAPN1-206ENST00000526966 FOCADQ5VW36 1801 aa23.15■■□□□ 1.3
CAPN1-206ENST00000526966 ADCY3O60266 1144 aa23.14■■□□□ 1.29
CAPN1-206ENST00000526966 GSTO1P78417 241 aa23.14■■□□□ 1.29
CAPN1-206ENST00000526966 PXYLP1Q8TE99 480 aa23.14■■□□□ 1.29
CAPN1-206ENST00000526966 U2AF1L4Q8WU68 220 aaKnown RBP23.14■■□□□ 1.29
CAPN1-206ENST00000526966 NEUROD6Q96NK8 337 aa23.14■■□□□ 1.29
CAPN1-206ENST00000526966 OSBPL5Q9H0X9 879 aaPredicted RBP23.14■■□□□ 1.29
CAPN1-206ENST00000526966 UNC93B1Q9H1C4 597 aa23.14■■□□□ 1.29
CAPN1-206ENST00000526966 FAM196BA6NMK8 535 aa23.13■■□□□ 1.29
CAPN1-206ENST00000526966 TNPO2O14787 897 aaKnown RBP23.13■■□□□ 1.29
CAPN1-206ENST00000526966 LDHCP07864 332 aa23.13■■□□□ 1.29
CAPN1-206ENST00000526966 PROCA1Q8NCQ7 364 aaPredicted RBP23.13■■□□□ 1.29
CAPN1-206ENST00000526966 DPF3Q92784 378 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms