RNA–Protein interactions for RNA: ENST00000526639.2

SNRNP35-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP35, Length 1,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-203ENST00000526639 PIH1D3Q9NQM4 214 aaKnown RBP13.6□□□□□ -0.23
SNRNP35-203ENST00000526639 CASP8AP2Q9UKL3 1982 aa13.59□□□□□ -0.23
SNRNP35-203ENST00000526639 TBC1D8O95759 1140 aa13.59□□□□□ -0.23
SNRNP35-203ENST00000526639 SLURP2P0DP57 97 aa13.59□□□□□ -0.23
SNRNP35-203ENST00000526639 ZBTB48P10074 688 aaPredicted RBP13.59□□□□□ -0.23
SNRNP35-203ENST00000526639 TM4SF4P48230 202 aa13.59□□□□□ -0.23
SNRNP35-203ENST00000526639 RHBDL3P58872 404 aa13.59□□□□□ -0.23
SNRNP35-203ENST00000526639 ADGRA1Q86SQ6 560 aa13.59□□□□□ -0.23
SNRNP35-203ENST00000526639 ZSCAN29Q8IWY8 852 aaPredicted RBP13.59□□□□□ -0.23
SNRNP35-203ENST00000526639 REM2Q8IYK8 340 aaPredicted RBP13.59□□□□□ -0.23
SNRNP35-203ENST00000526639 OTOFQ9HC10 1997 aa13.59□□□□□ -0.23
SNRNP35-203ENST00000526639 UNCXA6NJT0 531 aa13.58□□□□□ -0.24
SNRNP35-203ENST00000526639 RAB11FIP3O75154 756 aa13.58□□□□□ -0.24
SNRNP35-203ENST00000526639 IDH1O75874 414 aaKnown RBP13.58□□□□□ -0.24
SNRNP35-203ENST00000526639 LDHCP07864 332 aa13.58□□□□□ -0.24
SNRNP35-203ENST00000526639 IFIT2P09913 472 aaKnown RBP13.58□□□□□ -0.24
SNRNP35-203ENST00000526639 SREBF2Q12772 1141 aa13.58□□□□□ -0.24
SNRNP35-203ENST00000526639 NAA16Q6N069 864 aaPredicted RBP13.58□□□□□ -0.24
SNRNP35-203ENST00000526639 SH3BP5LQ7L8J4 393 aa13.58□□□□□ -0.24
SNRNP35-203ENST00000526639 ANP32EQ9BTT0 268 aa13.58□□□□□ -0.24
SNRNP35-203ENST00000526639 SAGE1Q9NXZ1 904 aa13.58□□□□□ -0.24
SNRNP35-203ENST00000526639 AATFQ9NY61 560 aaKnown RBP eCLIP13.58□□□□□ -0.24
SNRNP35-203ENST00000526639 CSADQ9Y600 493 aa13.58□□□□□ -0.24
SNRNP35-203ENST00000526639 MYO5AQ9Y4I1 1855 aaKnown RBP13.58□□□□□ -0.24
SNRNP35-203ENST00000526639 RPAP1Q9BWH6 1393 aaPredicted RBP13.58□□□□□ -0.24
SNRNP35-203ENST00000526639 DDTLA6NHG4 134 aaPredicted RBP13.58□□□□□ -0.24
SNRNP35-203ENST00000526639 SMARCA5O60264 1052 aaPredicted RBP13.58□□□□□ -0.24
SNRNP35-203ENST00000526639 DCAF15Q66K64 600 aa13.58□□□□□ -0.24
SNRNP35-203ENST00000526639 HOOK2Q96ED9 719 aa13.58□□□□□ -0.24
SNRNP35-203ENST00000526639 OTUD5Q96G74 571 aa13.58□□□□□ -0.24
SNRNP35-203ENST00000526639 PPP4R2Q9NY27 417 aa13.58□□□□□ -0.24
SNRNP35-203ENST00000526639 ENTPD3O75355 529 aa13.57□□□□□ -0.24
SNRNP35-203ENST00000526639 CAPN15O75808 1086 aa13.57□□□□□ -0.24
SNRNP35-203ENST00000526639 INPP5BP32019 993 aa13.57□□□□□ -0.24
SNRNP35-203ENST00000526639 SH3RF3Q8TEJ3 882 aaPredicted RBP13.57□□□□□ -0.24
SNRNP35-203ENST00000526639 RFX7Q2KHR2 1363 aa13.56□□□□□ -0.24
SNRNP35-203ENST00000526639 MANSC4A6NHS7 340 aaPredicted RBP13.56□□□□□ -0.24
SNRNP35-203ENST00000526639 ZNF341Q9BYN7 854 aa13.56□□□□□ -0.24
SNRNP35-203ENST00000526639 LRRCC1Q9C099 1032 aa13.56□□□□□ -0.24
SNRNP35-203ENST00000526639 PCDHB15Q9Y5E8 787 aa13.56□□□□□ -0.24
SNRNP35-203ENST00000526639 SNCAIPQ9Y6H5 919 aa13.56□□□□□ -0.24
SNRNP35-203ENST00000526639 IGF2BP3O00425 579 aaKnown RBP eCLIP13.56□□□□□ -0.24
SNRNP35-203ENST00000526639 IFNL1Q8IU54 200 aa13.56□□□□□ -0.24
SNRNP35-203ENST00000526639 DNAJC2Q99543 621 aaKnown RBP13.56□□□□□ -0.24
SNRNP35-203ENST00000526639 NOL10Q9BSC4 688 aaKnown RBP13.56□□□□□ -0.24
SNRNP35-203ENST00000526639 R3HDMLQ9H3Y0 253 aa13.56□□□□□ -0.24
SNRNP35-203ENST00000526639 CYP7A1P22680 504 aa13.55□□□□□ -0.24
SNRNP35-203ENST00000526639 INHBEP58166 350 aa13.55□□□□□ -0.24
SNRNP35-203ENST00000526639 TEX11Q8IYF3 940 aa13.55□□□□□ -0.24
SNRNP35-203ENST00000526639 MAGEB6Q8N7X4 407 aa13.55□□□□□ -0.24
SNRNP35-203ENST00000526639 MIGA1Q8NAN2 632 aa13.55□□□□□ -0.24
SNRNP35-203ENST00000526639 EDC3Q96F86 508 aaKnown RBP13.55□□□□□ -0.24
SNRNP35-203ENST00000526639 PTPN18Q99952 460 aa13.55□□□□□ -0.24
SNRNP35-203ENST00000526639 FAM196BA6NMK8 535 aa13.54□□□□□ -0.24
SNRNP35-203ENST00000526639 IRF6O14896 467 aa13.54□□□□□ -0.24
SNRNP35-203ENST00000526639 BAG3O95817 575 aa13.54□□□□□ -0.24
SNRNP35-203ENST00000526639 DYNLL1P63167 89 aaKnown RBP13.54□□□□□ -0.24
SNRNP35-203ENST00000526639 MS4A4AQ96JQ5 239 aa13.54□□□□□ -0.24
SNRNP35-203ENST00000526639 BOLA2Q9H3K6 86 aa13.54□□□□□ -0.24
SNRNP35-203ENST00000526639 ATRNL1Q5VV63 1379 aa13.54□□□□□ -0.24
SNRNP35-203ENST00000526639 SPDYE5A6NIY4 337 aa13.54□□□□□ -0.24
SNRNP35-203ENST00000526639 GOLIM4O00461 696 aa13.54□□□□□ -0.24
SNRNP35-203ENST00000526639 ERO1BQ86YB8 467 aa13.54□□□□□ -0.24
SNRNP35-203ENST00000526639 TGFBRAP1Q8WUH2 860 aa13.54□□□□□ -0.24
SNRNP35-203ENST00000526639 OSBPL5Q9H0X9 879 aaPredicted RBP13.54□□□□□ -0.24
SNRNP35-203ENST00000526639 DCTPP1Q9H773 170 aa13.54□□□□□ -0.24
SNRNP35-203ENST00000526639 ZNF112Q9UJU3 913 aa13.54□□□□□ -0.24
SNRNP35-203ENST00000526639 CENPFP49454 3210 aa13.53□□□□□ -0.24
SNRNP35-203ENST00000526639 MAP3K12Q12852 859 aa13.53□□□□□ -0.24
SNRNP35-203ENST00000526639 MAPKAPK5Q8IW41 473 aa13.53□□□□□ -0.24
SNRNP35-203ENST00000526639 PHF20L1A8MW92 1017 aa13.52□□□□□ -0.24
SNRNP35-203ENST00000526639 PPP4CP60510 307 aa13.52□□□□□ -0.24
SNRNP35-203ENST00000526639 SLC4A8Q2Y0W8 1093 aa13.52□□□□□ -0.24
SNRNP35-203ENST00000526639 ZNF296Q8WUU4 475 aaPredicted RBP13.52□□□□□ -0.24
SNRNP35-203ENST00000526639 BRI3BPQ8WY22 251 aa13.52□□□□□ -0.24
SNRNP35-203ENST00000526639 CCL15-CCL14A0A0B4J2E2 113 aa13.52□□□□□ -0.25
SNRNP35-203ENST00000526639 ALDH1A1P00352 501 aa13.52□□□□□ -0.25
SNRNP35-203ENST00000526639 GTF2A2P52657 109 aa13.52□□□□□ -0.25
SNRNP35-203ENST00000526639 TTF1Q15361 905 aaPredicted RBP13.52□□□□□ -0.25
SNRNP35-203ENST00000526639 CCL15Q16663 113 aa13.52□□□□□ -0.25
SNRNP35-203ENST00000526639 SLC9C2Q5TAH2 1124 aa13.52□□□□□ -0.25
SNRNP35-203ENST00000526639 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.52□□□□□ -0.25
SNRNP35-203ENST00000526639 MAST2Q6P0Q8 1798 aa13.51□□□□□ -0.25
SNRNP35-203ENST00000526639 DOCK2Q92608 1830 aa13.51□□□□□ -0.25
SNRNP35-203ENST00000526639 TESPA1A2RU30 521 aaPredicted RBP13.51□□□□□ -0.25
SNRNP35-203ENST00000526639 GPR25O00155 361 aa13.51□□□□□ -0.25
SNRNP35-203ENST00000526639 NPM3O75607 178 aaKnown RBP13.51□□□□□ -0.25
SNRNP35-203ENST00000526639 MAP4K4O95819 1239 aaPredicted RBP13.51□□□□□ -0.25
SNRNP35-203ENST00000526639 PLCG2P16885 1265 aa13.51□□□□□ -0.25
SNRNP35-203ENST00000526639 DGKZQ13574 1117 aa13.51□□□□□ -0.25
SNRNP35-203ENST00000526639 B4GALNT3Q6L9W6 998 aa13.51□□□□□ -0.25
SNRNP35-203ENST00000526639 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.51□□□□□ -0.25
SNRNP35-203ENST00000526639 PALD1Q9ULE6 856 aa13.51□□□□□ -0.25
SNRNP35-203ENST00000526639 FLT1P17948 1338 aa13.51□□□□□ -0.25
SNRNP35-203ENST00000526639 ATP5JP18859 108 aa13.51□□□□□ -0.25
SNRNP35-203ENST00000526639 MAP3K10Q02779 954 aa13.51□□□□□ -0.25
SNRNP35-203ENST00000526639 PPATQ06203 517 aa13.51□□□□□ -0.25
SNRNP35-203ENST00000526639 SLFNL1Q499Z3 407 aa13.51□□□□□ -0.25
SNRNP35-203ENST00000526639 TSHZ3Q63HK5 1081 aa13.51□□□□□ -0.25
SNRNP35-203ENST00000526639 OTUD7BQ6GQQ9 843 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms