RNA–Protein interactions for RNA: ENST00000526506.5

HIF3A-210, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-210ENST00000526506 SLC10A4Q96EP9 437 aa18.28■□□□□ 0.52
HIF3A-210ENST00000526506 CLMNQ96JQ2 1002 aa18.28■□□□□ 0.52
HIF3A-210ENST00000526506 BEGAINQ9BUH8 593 aa18.28■□□□□ 0.52
HIF3A-210ENST00000526506 TTC41PQ6P2S7 1318 aa18.27■□□□□ 0.52
HIF3A-210ENST00000526506 PDE6AP16499 860 aa18.27■□□□□ 0.52
HIF3A-210ENST00000526506 MIGA2Q7L4E1 593 aa18.27■□□□□ 0.52
HIF3A-210ENST00000526506 ZSCAN29Q8IWY8 852 aaPredicted RBP18.27■□□□□ 0.52
HIF3A-210ENST00000526506 MIGA1Q8NAN2 632 aa18.27■□□□□ 0.52
HIF3A-210ENST00000526506 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.27■□□□□ 0.52
HIF3A-210ENST00000526506 CSRNP1Q96S65 589 aa18.27■□□□□ 0.52
HIF3A-210ENST00000526506 ZNF341Q9BYN7 854 aa18.27■□□□□ 0.52
HIF3A-210ENST00000526506 MAP3K9P80192 1104 aa18.26■□□□□ 0.51
HIF3A-210ENST00000526506 SPRYD7Q5W111 196 aa18.26■□□□□ 0.51
HIF3A-210ENST00000526506 TSHZ3Q63HK5 1081 aa18.26■□□□□ 0.51
HIF3A-210ENST00000526506 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.26■□□□□ 0.51
HIF3A-210ENST00000526506 SH3BP5LQ7L8J4 393 aa18.26■□□□□ 0.51
HIF3A-210ENST00000526506 SMC5Q8IY18 1101 aa18.26■□□□□ 0.51
HIF3A-210ENST00000526506 OTUD7AQ8TE49 926 aaPredicted RBP18.26■□□□□ 0.51
HIF3A-210ENST00000526506 WRNIP1Q96S55 665 aa18.26■□□□□ 0.51
HIF3A-210ENST00000526506 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.26■□□□□ 0.51
HIF3A-210ENST00000526506 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.26■□□□□ 0.51
HIF3A-210ENST00000526506 CSADQ9Y600 493 aa18.26■□□□□ 0.51
HIF3A-210ENST00000526506 ATRNL1Q5VV63 1379 aa18.26■□□□□ 0.51
HIF3A-210ENST00000526506 DDTLA6NHG4 134 aaPredicted RBP18.25■□□□□ 0.51
HIF3A-210ENST00000526506 ERC2O15083 957 aa18.25■□□□□ 0.51
HIF3A-210ENST00000526506 IGHDP01880 384 aa18.25■□□□□ 0.51
HIF3A-210ENST00000526506 MX1P20591 662 aa18.25■□□□□ 0.51
HIF3A-210ENST00000526506 DYNLL1P63167 89 aaKnown RBP18.25■□□□□ 0.51
HIF3A-210ENST00000526506 MKRN3Q13064 507 aaKnown RBP18.25■□□□□ 0.51
HIF3A-210ENST00000526506 VGLL4Q14135 290 aa18.25■□□□□ 0.51
HIF3A-210ENST00000526506 REM2Q8IYK8 340 aaPredicted RBP18.25■□□□□ 0.51
HIF3A-210ENST00000526506 TGFBRAP1Q8WUH2 860 aa18.25■□□□□ 0.51
HIF3A-210ENST00000526506 OSBPL5Q9H0X9 879 aaPredicted RBP18.25■□□□□ 0.51
HIF3A-210ENST00000526506 COL2A1P02458 1487 aaPredicted RBP18.25■□□□□ 0.51
HIF3A-210ENST00000526506 ZNF532Q9HCE3 1301 aa18.24■□□□□ 0.51
HIF3A-210ENST00000526506 OTOFQ9HC10 1997 aa18.24■□□□□ 0.51
HIF3A-210ENST00000526506 CAPN15O75808 1086 aa18.24■□□□□ 0.51
HIF3A-210ENST00000526506 ZBTB48P10074 688 aaPredicted RBP18.24■□□□□ 0.51
HIF3A-210ENST00000526506 WNK4Q96J92 1243 aa18.24■□□□□ 0.51
HIF3A-210ENST00000526506 ELP3Q9H9T3 547 aa18.24■□□□□ 0.51
HIF3A-210ENST00000526506 TCRBV5S4A2TA0A5A2 114 aa18.23■□□□□ 0.51
HIF3A-210ENST00000526506 FOXN1O15353 648 aa18.23■□□□□ 0.51
HIF3A-210ENST00000526506 CA12O43570 354 aa18.23■□□□□ 0.51
HIF3A-210ENST00000526506 GLRX3O76003 335 aaKnown RBP18.23■□□□□ 0.51
HIF3A-210ENST00000526506 ADD2P35612 726 aa18.23■□□□□ 0.51
HIF3A-210ENST00000526506 MAPKAPK5Q8IW41 473 aa18.23■□□□□ 0.51
HIF3A-210ENST00000526506 DHX36Q9H2U1 1008 aaKnown RBP18.23■□□□□ 0.51
HIF3A-210ENST00000526506 FLT1P17948 1338 aa18.23■□□□□ 0.51
HIF3A-210ENST00000526506 SALL3Q9BXA9 1300 aa18.23■□□□□ 0.51
HIF3A-210ENST00000526506 AK9Q5TCS8 1911 aa18.22■□□□□ 0.51
HIF3A-210ENST00000526506 MAGEB6P1A0A0J9YX57 407 aa18.22■□□□□ 0.51
HIF3A-210ENST00000526506 CTCFP49711 727 aaPredicted RBP18.22■□□□□ 0.51
HIF3A-210ENST00000526506 B4GALNT3Q6L9W6 998 aa18.22■□□□□ 0.51
HIF3A-210ENST00000526506 ZSCAN25Q6NSZ9 544 aa18.22■□□□□ 0.51
HIF3A-210ENST00000526506 PI4K2BQ8TCG2 481 aa18.22■□□□□ 0.51
HIF3A-210ENST00000526506 ZKSCAN4Q969J2 545 aaPredicted RBP18.22■□□□□ 0.51
HIF3A-210ENST00000526506 OPTNQ96CV9 577 aa18.22■□□□□ 0.51
HIF3A-210ENST00000526506 RIOK1Q9BRS2 568 aaKnown RBP18.22■□□□□ 0.51
HIF3A-210ENST00000526506 ZNF112Q9UJU3 913 aa18.22■□□□□ 0.51
HIF3A-210ENST00000526506 PCNTO95613 3336 aa18.21■□□□□ 0.51
HIF3A-210ENST00000526506 INPP5BP32019 993 aa18.21■□□□□ 0.51
HIF3A-210ENST00000526506 USP5P45974 858 aa18.21■□□□□ 0.51
HIF3A-210ENST00000526506 MAP3K10Q02779 954 aa18.21■□□□□ 0.51
HIF3A-210ENST00000526506 SREBF2Q12772 1141 aa18.21■□□□□ 0.51
HIF3A-210ENST00000526506 KBTBD3Q8NAB2 608 aa18.21■□□□□ 0.51
HIF3A-210ENST00000526506 LNPKQ9C0E8 428 aa18.21■□□□□ 0.51
HIF3A-210ENST00000526506 SNCAIPQ9Y6H5 919 aa18.21■□□□□ 0.51
HIF3A-210ENST00000526506 MANSC4A6NHS7 340 aaPredicted RBP18.2■□□□□ 0.5
HIF3A-210ENST00000526506 SPDYE5A6NIY4 337 aa18.2■□□□□ 0.5
HIF3A-210ENST00000526506 TBC1D12O60347 775 aa18.2■□□□□ 0.5
HIF3A-210ENST00000526506 NUCB1Q02818 461 aa18.2■□□□□ 0.5
HIF3A-210ENST00000526506 UBE3CQ15386 1083 aa18.2■□□□□ 0.5
HIF3A-210ENST00000526506 CHD1LQ86WJ1 897 aa18.2■□□□□ 0.5
HIF3A-210ENST00000526506 ERO1BQ86YB8 467 aa18.2■□□□□ 0.5
HIF3A-210ENST00000526506 TNS4Q8IZW8 715 aa18.2■□□□□ 0.5
HIF3A-210ENST00000526506 CRNKL1Q9BZJ0 848 aaKnown RBP18.2■□□□□ 0.5
HIF3A-210ENST00000526506 GJA5P36382 358 aa18.19■□□□□ 0.5
HIF3A-210ENST00000526506 TM4SF4P48230 202 aa18.19■□□□□ 0.5
HIF3A-210ENST00000526506 PDE1AP54750 535 aa18.19■□□□□ 0.5
HIF3A-210ENST00000526506 NOL9Q5SY16 702 aaKnown RBP18.19■□□□□ 0.5
HIF3A-210ENST00000526506 CNKSR2Q8WXI2 1034 aa18.19■□□□□ 0.5
HIF3A-210ENST00000526506 OTUD5Q96G74 571 aa18.19■□□□□ 0.5
HIF3A-210ENST00000526506 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.19■□□□□ 0.5
HIF3A-210ENST00000526506 SAGE1Q9NXZ1 904 aa18.19■□□□□ 0.5
HIF3A-210ENST00000526506 PI4KBQ9UBF8 816 aa18.19■□□□□ 0.5
HIF3A-210ENST00000526506 STAP2Q9UGK3 403 aa18.19■□□□□ 0.5
HIF3A-210ENST00000526506 PALD1Q9ULE6 856 aa18.19■□□□□ 0.5
HIF3A-210ENST00000526506 FOCADQ5VW36 1801 aa18.19■□□□□ 0.5
HIF3A-210ENST00000526506 PHF20L1A8MW92 1017 aa18.18■□□□□ 0.5
HIF3A-210ENST00000526506 HSPA8P11142 646 aaKnown RBP18.18■□□□□ 0.5
HIF3A-210ENST00000526506 INHBEP58166 350 aa18.18■□□□□ 0.5
HIF3A-210ENST00000526506 SLFNL1Q499Z3 407 aa18.18■□□□□ 0.5
HIF3A-210ENST00000526506 LCORLQ8N3X6 602 aa18.18■□□□□ 0.5
HIF3A-210ENST00000526506 RNF186Q9NXI6 227 aa18.18■□□□□ 0.5
HIF3A-210ENST00000526506 SAP30BPQ9UHR5 308 aaKnown RBP18.18■□□□□ 0.5
HIF3A-210ENST00000526506 HERC5Q9UII4 1024 aaKnown RBP18.18■□□□□ 0.5
HIF3A-210ENST00000526506 CDK5RAP2Q96SN8 1893 aa18.18■□□□□ 0.5
HIF3A-210ENST00000526506 MBD4O95243 580 aa18.17■□□□□ 0.5
HIF3A-210ENST00000526506 CHGBP05060 677 aa18.17■□□□□ 0.5
HIF3A-210ENST00000526506 HLA-DOAP06340 250 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms