RNA–Protein interactions for RNA: ENST00000526469.5

GSDMD-207, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 1,643 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-207ENST00000526469 MYH1P12882 1939 aa27.38■■□□□ 1.97
GSDMD-207ENST00000526469 USP17L12C9JPN9 530 aa27.38■■□□□ 1.97
GSDMD-207ENST00000526469 USP17L21D6R901 530 aa27.38■■□□□ 1.97
GSDMD-207ENST00000526469 SLC3A2P08195 630 aaKnown RBP27.38■■□□□ 1.97
GSDMD-207ENST00000526469 EXOSC10Q01780 885 aaKnown RBP27.38■■□□□ 1.97
GSDMD-207ENST00000526469 CTDSPL2Q05D32 466 aa27.38■■□□□ 1.97
GSDMD-207ENST00000526469 TGFBRAP1Q8WUH2 860 aa27.38■■□□□ 1.97
GSDMD-207ENST00000526469 ZSCAN31Q96LW9 406 aaPredicted RBP27.38■■□□□ 1.97
GSDMD-207ENST00000526469 MCM9Q9NXL9 1143 aa27.38■■□□□ 1.97
GSDMD-207ENST00000526469 DDX60LQ5H9U9 1706 aaKnown RBP27.37■■□□□ 1.97
GSDMD-207ENST00000526469 FGD1P98174 961 aa27.37■■□□□ 1.97
GSDMD-207ENST00000526469 RASSF7Q02833 373 aa27.37■■□□□ 1.97
GSDMD-207ENST00000526469 NOL8Q76FK4 1167 aaKnown RBP27.37■■□□□ 1.97
GSDMD-207ENST00000526469 MB21D2Q8IYB1 491 aaPredicted RBP27.37■■□□□ 1.97
GSDMD-207ENST00000526469 TNIP1Q15025 636 aa27.36■■□□□ 1.97
GSDMD-207ENST00000526469 CIAPIN1Q6FI81 312 aa27.36■■□□□ 1.97
GSDMD-207ENST00000526469 AGBL3Q8NEM8 1001 aa27.36■■□□□ 1.97
GSDMD-207ENST00000526469 HDAC9Q9UKV0 1011 aa27.36■■□□□ 1.97
GSDMD-207ENST00000526469 DICER1Q9UPY3 1922 aaKnown RBP27.36■■□□□ 1.97
GSDMD-207ENST00000526469 Q6ZUG5 572 aa27.35■■□□□ 1.97
GSDMD-207ENST00000526469 TCEANC2Q96MN5 208 aa27.35■■□□□ 1.97
GSDMD-207ENST00000526469 SH2B1Q9NRF2 756 aaPredicted RBP27.35■■□□□ 1.97
GSDMD-207ENST00000526469 RBM5P52756 815 aaKnown RBP eCLIP27.34■■□□□ 1.97
GSDMD-207ENST00000526469 CXCL9Q07325 125 aa27.34■■□□□ 1.97
GSDMD-207ENST00000526469 COL9A3Q14050 684 aaPredicted RBP27.34■■□□□ 1.97
GSDMD-207ENST00000526469 APOBEC3HQ6NTF7 200 aaKnown RBP27.34■■□□□ 1.97
GSDMD-207ENST00000526469 FBXL16Q8N461 479 aa27.34■■□□□ 1.97
GSDMD-207ENST00000526469 USP40Q9NVE5 1235 aa27.34■■□□□ 1.97
GSDMD-207ENST00000526469 GOLGB1Q14789 3259 aaKnown RBP27.34■■□□□ 1.97
GSDMD-207ENST00000526469 FLT1P17948 1338 aa27.34■■□□□ 1.97
GSDMD-207ENST00000526469 NEDD4P46934 1319 aa27.34■■□□□ 1.97
GSDMD-207ENST00000526469 TOB2Q14106 344 aaPredicted RBP27.34■■□□□ 1.97
GSDMD-207ENST00000526469 MAPKAPK5Q8IW41 473 aa27.34■■□□□ 1.97
GSDMD-207ENST00000526469 OGFOD1Q8N543 542 aa27.34■■□□□ 1.97
GSDMD-207ENST00000526469 GMLQ99445 158 aa27.34■■□□□ 1.97
GSDMD-207ENST00000526469 PRC1O43663 620 aa27.33■■□□□ 1.97
GSDMD-207ENST00000526469 MMP14P50281 582 aa27.33■■□□□ 1.97
GSDMD-207ENST00000526469 CUL4AQ13619 759 aa27.33■■□□□ 1.97
GSDMD-207ENST00000526469 SPRYD3Q8NCJ5 442 aa27.33■■□□□ 1.97
GSDMD-207ENST00000526469 AGXT2Q9BYV1 514 aa27.33■■□□□ 1.97
GSDMD-207ENST00000526469 NT5C2P49902 561 aa27.32■■□□□ 1.96
GSDMD-207ENST00000526469 C12orf60Q5U649 245 aa27.32■■□□□ 1.96
GSDMD-207ENST00000526469 ARHGAP27Q6ZUM4 889 aa27.32■■□□□ 1.96
GSDMD-207ENST00000526469 CYP2D7A0A087X1C5 515 aa27.31■■□□□ 1.96
GSDMD-207ENST00000526469 B4E1Z4 1266 aa27.31■■□□□ 1.96
GSDMD-207ENST00000526469 USP17L8P0C7I0 530 aa27.31■■□□□ 1.96
GSDMD-207ENST00000526469 EIF6P56537 245 aaKnown RBP27.31■■□□□ 1.96
GSDMD-207ENST00000526469 CDC42EP5Q6NZY7 148 aa27.31■■□□□ 1.96
GSDMD-207ENST00000526469 TOMM22Q9NS69 142 aa27.31■■□□□ 1.96
GSDMD-207ENST00000526469 ROBO3Q96MS0 1386 aa27.31■■□□□ 1.96
GSDMD-207ENST00000526469 POLR3DP05423 398 aaPredicted RBP27.3■■□□□ 1.96
GSDMD-207ENST00000526469 FGRP09769 529 aa27.3■■□□□ 1.96
GSDMD-207ENST00000526469 PDE4BQ07343 736 aa27.3■■□□□ 1.96
GSDMD-207ENST00000526469 ESR2Q92731 530 aa27.3■■□□□ 1.96
GSDMD-207ENST00000526469 INTS4Q96HW7 963 aaKnown RBP27.3■■□□□ 1.96
GSDMD-207ENST00000526469 SBF1O95248 1867 aa27.3■■□□□ 1.96
GSDMD-207ENST00000526469 RPS12P25398 132 aaKnown RBP27.3■■□□□ 1.96
GSDMD-207ENST00000526469 CFAP100Q494V2 611 aa27.3■■□□□ 1.96
GSDMD-207ENST00000526469 TMEM87BQ96K49 555 aa27.3■■□□□ 1.96
GSDMD-207ENST00000526469 MTA3Q9BTC8 594 aa27.3■■□□□ 1.96
GSDMD-207ENST00000526469 SLKQ9H2G2 1235 aaPredicted RBP27.3■■□□□ 1.96
GSDMD-207ENST00000526469 FZD9O00144 591 aa27.29■■□□□ 1.96
GSDMD-207ENST00000526469 WDHD1O75717 1129 aaPredicted RBP27.29■■□□□ 1.96
GSDMD-207ENST00000526469 LMNB1P20700 586 aa27.29■■□□□ 1.96
GSDMD-207ENST00000526469 RRP12Q5JTH9 1297 aaKnown RBP27.29■■□□□ 1.96
GSDMD-207ENST00000526469 CHST3Q7LGC8 479 aa27.29■■□□□ 1.96
GSDMD-207ENST00000526469 BRF1Q92994 677 aa27.29■■□□□ 1.96
GSDMD-207ENST00000526469 LRRC2Q9BYS8 371 aa27.29■■□□□ 1.96
GSDMD-207ENST00000526469 TPCN1Q9ULQ1 816 aa27.29■■□□□ 1.96
GSDMD-207ENST00000526469 ORC4O43929 436 aa27.28■■□□□ 1.96
GSDMD-207ENST00000526469 KDM4AO75164 1064 aa27.28■■□□□ 1.96
GSDMD-207ENST00000526469 CYP2D6P10635 497 aa27.28■■□□□ 1.96
GSDMD-207ENST00000526469 ANTXR2P58335 489 aa27.28■■□□□ 1.96
GSDMD-207ENST00000526469 ZBTB12Q9Y330 459 aaPredicted RBP27.28■■□□□ 1.96
GSDMD-207ENST00000526469 CYB5R4Q7L1T6 521 aa27.27■■□□□ 1.96
GSDMD-207ENST00000526469 LARP6Q9BRS8 491 aaKnown RBP27.27■■□□□ 1.96
GSDMD-207ENST00000526469 ZNF287Q9HBT7 754 aa27.27■■□□□ 1.96
GSDMD-207ENST00000526469 INCENPQ9NQS7 918 aa27.27■■□□□ 1.96
GSDMD-207ENST00000526469 SAP30BPQ9UHR5 308 aaKnown RBP27.27■■□□□ 1.96
GSDMD-207ENST00000526469 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.27■■□□□ 1.96
GSDMD-207ENST00000526469 TACC3Q9Y6A5 838 aa27.27■■□□□ 1.96
GSDMD-207ENST00000526469 NPM3O75607 178 aaKnown RBP27.27■■□□□ 1.96
GSDMD-207ENST00000526469 PRELPP51888 382 aa27.27■■□□□ 1.96
GSDMD-207ENST00000526469 PICALMQ13492 652 aa27.27■■□□□ 1.96
GSDMD-207ENST00000526469 SART3Q15020 963 aaKnown RBP27.27■■□□□ 1.96
GSDMD-207ENST00000526469 ME3Q16798 604 aa27.27■■□□□ 1.96
GSDMD-207ENST00000526469 STK11IPQ8N1F8 1099 aa27.27■■□□□ 1.96
GSDMD-207ENST00000526469 CWC22Q9HCG8 908 aaKnown RBP27.27■■□□□ 1.96
GSDMD-207ENST00000526469 ZSWIM5Q9P217 1185 aa27.27■■□□□ 1.96
GSDMD-207ENST00000526469 DLGAP5Q15398 846 aa27.26■■□□□ 1.95
GSDMD-207ENST00000526469 IDI2Q9BXS1 227 aa27.26■■□□□ 1.95
GSDMD-207ENST00000526469 FOXD4L1Q9NU39 408 aa27.26■■□□□ 1.95
GSDMD-207ENST00000526469 ANGEL1Q9UNK9 670 aaKnown RBP27.26■■□□□ 1.95
GSDMD-207ENST00000526469 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.26■■□□□ 1.95
GSDMD-207ENST00000526469 TTC6Q86TZ1 520 aa27.25■■□□□ 1.95
GSDMD-207ENST00000526469 MTMR14Q8NCE2 650 aa27.25■■□□□ 1.95
GSDMD-207ENST00000526469 SPDYE2BA6NHP3 402 aa27.24■■□□□ 1.95
GSDMD-207ENST00000526469 SPDYE6P0CI01 402 aa27.24■■□□□ 1.95
GSDMD-207ENST00000526469 OSBPL5Q9H0X9 879 aaPredicted RBP27.24■■□□□ 1.95
GSDMD-207ENST00000526469 TMOD2Q9NZR1 351 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms