RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 TAF1CQ15572 869 aaPredicted RBP14.85□□□□□ -0.03
SSBP3-210ENST00000525990 CEP85Q6P2H3 762 aa14.85□□□□□ -0.03
SSBP3-210ENST00000525990 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.85□□□□□ -0.03
SSBP3-210ENST00000525990 HOOK2Q96ED9 719 aa14.85□□□□□ -0.03
SSBP3-210ENST00000525990 IDI2Q9BXS1 227 aa14.85□□□□□ -0.03
SSBP3-210ENST00000525990 ZNF112Q9UJU3 913 aa14.85□□□□□ -0.03
SSBP3-210ENST00000525990 RBBP6Q7Z6E9 1792 aaKnown RBP14.85□□□□□ -0.03
SSBP3-210ENST00000525990 TNRC18O15417 2968 aaPredicted RBP14.84□□□□□ -0.03
SSBP3-210ENST00000525990 GPR75-ASB3A0A0A6YYF3 556 aa14.84□□□□□ -0.03
SSBP3-210ENST00000525990 FAM196BA6NMK8 535 aa14.84□□□□□ -0.03
SSBP3-210ENST00000525990 BTBD19C9JJ37 291 aa14.84□□□□□ -0.03
SSBP3-210ENST00000525990 PPIL2Q13356 520 aa14.84□□□□□ -0.03
SSBP3-210ENST00000525990 TTC39AQ5SRH9 613 aa14.84□□□□□ -0.03
SSBP3-210ENST00000525990 SPTY2D1Q68D10 685 aaPredicted RBP14.84□□□□□ -0.03
SSBP3-210ENST00000525990 FBXO46Q6PJ61 603 aaPredicted RBP14.84□□□□□ -0.03
SSBP3-210ENST00000525990 FAM163AQ96GL9 167 aaPredicted RBP14.84□□□□□ -0.03
SSBP3-210ENST00000525990 CCDC8Q9H0W5 538 aaPredicted RBP14.84□□□□□ -0.03
SSBP3-210ENST00000525990 RAI14Q9P0K7 980 aa14.84□□□□□ -0.03
SSBP3-210ENST00000525990 DBNLQ9UJU6 430 aaKnown RBP14.84□□□□□ -0.03
SSBP3-210ENST00000525990 MYH1P12882 1939 aa14.84□□□□□ -0.03
SSBP3-210ENST00000525990 HTTP42858 3142 aa14.83□□□□□ -0.04
SSBP3-210ENST00000525990 PHF20L1A8MW92 1017 aa14.83□□□□□ -0.04
SSBP3-210ENST00000525990 ENTPD3O75355 529 aa14.83□□□□□ -0.04
SSBP3-210ENST00000525990 ECM2O94769 699 aaPredicted RBP14.83□□□□□ -0.04
SSBP3-210ENST00000525990 PKN2Q16513 984 aaKnown RBP14.83□□□□□ -0.04
SSBP3-210ENST00000525990 OTUD7BQ6GQQ9 843 aa14.83□□□□□ -0.04
SSBP3-210ENST00000525990 ADGRA1Q86SQ6 560 aa14.83□□□□□ -0.04
SSBP3-210ENST00000525990 CCDC84Q86UT8 332 aaPredicted RBP14.83□□□□□ -0.04
SSBP3-210ENST00000525990 ZSCAN29Q8IWY8 852 aaPredicted RBP14.83□□□□□ -0.04
SSBP3-210ENST00000525990 EAF2Q96CJ1 260 aaPredicted RBP14.83□□□□□ -0.04
SSBP3-210ENST00000525990 GPR108Q9NPR9 543 aa14.83□□□□□ -0.04
SSBP3-210ENST00000525990 EXOC6BQ9Y2D4 811 aa14.83□□□□□ -0.04
SSBP3-210ENST00000525990 NOP58Q9Y2X3 529 aaKnown RBP14.83□□□□□ -0.04
SSBP3-210ENST00000525990 NDUFB9Q9Y6M9 179 aa14.83□□□□□ -0.04
SSBP3-210ENST00000525990 CYP2E1P05181 493 aaPredicted RBP14.82□□□□□ -0.04
SSBP3-210ENST00000525990 UQCRFS1P1P0C7P4 283 aa14.82□□□□□ -0.04
SSBP3-210ENST00000525990 CETPP11597 493 aa14.82□□□□□ -0.04
SSBP3-210ENST00000525990 ZAP70P43403 619 aa14.82□□□□□ -0.04
SSBP3-210ENST00000525990 SP3Q02447 781 aa14.82□□□□□ -0.04
SSBP3-210ENST00000525990 SNAPC2Q13487 334 aa14.82□□□□□ -0.04
SSBP3-210ENST00000525990 MOGSQ13724 837 aa14.82□□□□□ -0.04
SSBP3-210ENST00000525990 NOL9Q5SY16 702 aaKnown RBP14.82□□□□□ -0.04
SSBP3-210ENST00000525990 LRP2BPQ9P2M1 347 aa14.82□□□□□ -0.04
SSBP3-210ENST00000525990 COG6Q9Y2V7 657 aa14.82□□□□□ -0.04
SSBP3-210ENST00000525990 LOC285556D6RIA3 1793 aa14.81□□□□□ -0.04
SSBP3-210ENST00000525990 PPATQ06203 517 aa14.81□□□□□ -0.04
SSBP3-210ENST00000525990 SLF2Q8IX21 1173 aa14.81□□□□□ -0.04
SSBP3-210ENST00000525990 SH3RF3Q8TEJ3 882 aaPredicted RBP14.81□□□□□ -0.04
SSBP3-210ENST00000525990 ERO1AQ96HE7 468 aa14.81□□□□□ -0.04
SSBP3-210ENST00000525990 ARHGAP39Q9C0H5 1083 aa14.81□□□□□ -0.04
SSBP3-210ENST00000525990 ZFYVE28Q9HCC9 887 aa14.81□□□□□ -0.04
SSBP3-210ENST00000525990 PIH1D3Q9NQM4 214 aaKnown RBP14.81□□□□□ -0.04
SSBP3-210ENST00000525990 CCDC158Q5M9N0 1113 aa14.8□□□□□ -0.04
SSBP3-210ENST00000525990 C20orf194Q5TEA3 1177 aa14.8□□□□□ -0.04
SSBP3-210ENST00000525990 AATFQ9NY61 560 aaKnown RBP eCLIP14.8□□□□□ -0.04
SSBP3-210ENST00000525990 KCNH4Q9UQ05 1017 aa14.8□□□□□ -0.04
SSBP3-210ENST00000525990 PTPN22Q9Y2R2 807 aa14.8□□□□□ -0.04
SSBP3-210ENST00000525990 DDX60LQ5H9U9 1706 aaKnown RBP14.8□□□□□ -0.04
SSBP3-210ENST00000525990 PTPRAP18433 802 aa14.79□□□□□ -0.04
SSBP3-210ENST00000525990 GSTO1P78417 241 aa14.79□□□□□ -0.04
SSBP3-210ENST00000525990 MAP3K10Q02779 954 aa14.79□□□□□ -0.04
SSBP3-210ENST00000525990 RRP1BQ14684 758 aaKnown RBP14.79□□□□□ -0.04
SSBP3-210ENST00000525990 SIRT2Q8IXJ6 389 aa14.79□□□□□ -0.04
SSBP3-210ENST00000525990 TEX11Q8IYF3 940 aa14.79□□□□□ -0.04
SSBP3-210ENST00000525990 SCYL3Q8IZE3 742 aa14.79□□□□□ -0.04
SSBP3-210ENST00000525990 NAV1Q8NEY1 1877 aa14.79□□□□□ -0.04
SSBP3-210ENST00000525990 OSBPL5Q9H0X9 879 aaPredicted RBP14.79□□□□□ -0.04
SSBP3-210ENST00000525990 EFCC1Q9HA90 598 aa14.79□□□□□ -0.04
SSBP3-210ENST00000525990 IL1RAPL2Q9NP60 686 aa14.79□□□□□ -0.04
SSBP3-210ENST00000525990 CPA4Q9UI42 421 aa14.79□□□□□ -0.04
SSBP3-210ENST00000525990 COL2A1P02458 1487 aaPredicted RBP14.78□□□□□ -0.04
SSBP3-210ENST00000525990 ADGRA2Q96PE1 1338 aa14.78□□□□□ -0.04
SSBP3-210ENST00000525990 APBB1O00213 710 aa14.78□□□□□ -0.04
SSBP3-210ENST00000525990 PDHXO00330 501 aa14.78□□□□□ -0.04
SSBP3-210ENST00000525990 TLR2O60603 784 aa14.78□□□□□ -0.04
SSBP3-210ENST00000525990 LDHCP07864 332 aa14.78□□□□□ -0.04
SSBP3-210ENST00000525990 CTGFP29279 349 aa14.78□□□□□ -0.04
SSBP3-210ENST00000525990 DYNLL1P63167 89 aaKnown RBP14.78□□□□□ -0.04
SSBP3-210ENST00000525990 NAA16Q6N069 864 aaPredicted RBP14.78□□□□□ -0.04
SSBP3-210ENST00000525990 GPAT2Q6NUI2 795 aa14.78□□□□□ -0.04
SSBP3-210ENST00000525990 BCL11AQ9H165 835 aa14.78□□□□□ -0.04
SSBP3-210ENST00000525990 ANTXR1Q9H6X2 564 aa14.78□□□□□ -0.04
SSBP3-210ENST00000525990 RCAN3Q9UKA8 241 aa14.78□□□□□ -0.04
SSBP3-210ENST00000525990 ZHX2Q9Y6X8 837 aa14.78□□□□□ -0.04
SSBP3-210ENST00000525990 CENPFP49454 3210 aa14.78□□□□□ -0.04
SSBP3-210ENST00000525990 MYH7P12883 1935 aa14.78□□□□□ -0.04
SSBP3-210ENST00000525990 POTEFA5A3E0 1075 aa14.77□□□□□ -0.05
SSBP3-210ENST00000525990 SHROOM1Q2M3G4 852 aaPredicted RBP14.77□□□□□ -0.05
SSBP3-210ENST00000525990 SLC4A8Q2Y0W8 1093 aa14.77□□□□□ -0.05
SSBP3-210ENST00000525990 ANKRD23Q86SG2 305 aa14.77□□□□□ -0.05
SSBP3-210ENST00000525990 AACSQ86V21 672 aa14.77□□□□□ -0.05
SSBP3-210ENST00000525990 TGFBRAP1Q8WUH2 860 aa14.77□□□□□ -0.05
SSBP3-210ENST00000525990 ZNF512BQ96KM6 892 aaPredicted RBP14.77□□□□□ -0.05
SSBP3-210ENST00000525990 PTCH2Q9Y6C5 1203 aa14.77□□□□□ -0.05
SSBP3-210ENST00000525990 TRIM75PA6NK02 468 aa14.76□□□□□ -0.05
SSBP3-210ENST00000525990 CYP2C8P10632 490 aa14.76□□□□□ -0.05
SSBP3-210ENST00000525990 LACTBP83111 547 aaPredicted RBP14.76□□□□□ -0.05
SSBP3-210ENST00000525990 MAPKAPK5Q8IW41 473 aa14.76□□□□□ -0.05
SSBP3-210ENST00000525990 RHPN1Q8TCX5 695 aa14.76□□□□□ -0.05
SSBP3-210ENST00000525990 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.76□□□□□ -0.051e-6■■■■■ 31.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms