RNA–Protein interactions for RNA: ENST00000525733.5

CTSF-203, Transcript of cathepsin F, humanhuman

TSL 3

Gene CTSF, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-203ENST00000525733 CTR9Q6PD62 1173 aa11.28□□□□□ -0.6
CTSF-203ENST00000525733 MB21D2Q8IYB1 491 aaPredicted RBP11.28□□□□□ -0.6
CTSF-203ENST00000525733 TEX11Q8IYF3 940 aa11.28□□□□□ -0.6
CTSF-203ENST00000525733 FBXL16Q8N461 479 aa11.28□□□□□ -0.6
CTSF-203ENST00000525733 SH3RF3Q8TEJ3 882 aaPredicted RBP11.28□□□□□ -0.6
CTSF-203ENST00000525733 STAG1Q8WVM7 1258 aa11.28□□□□□ -0.6
CTSF-203ENST00000525733 MXD3Q9BW11 206 aa11.28□□□□□ -0.6
CTSF-203ENST00000525733 NMRK2Q9NPI5 230 aa11.28□□□□□ -0.6
CTSF-203ENST00000525733 FOXD4L1Q9NU39 408 aa11.28□□□□□ -0.6
CTSF-203ENST00000525733 MCM9Q9NXL9 1143 aa11.28□□□□□ -0.6
CTSF-203ENST00000525733 ARPP21Q9UBL0 812 aaPredicted RBP11.28□□□□□ -0.6
CTSF-203ENST00000525733 DAGLAQ9Y4D2 1042 aa11.28□□□□□ -0.6
CTSF-203ENST00000525733 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.28□□□□□ -0.6
CTSF-203ENST00000525733 MYO5AQ9Y4I1 1855 aaKnown RBP11.27□□□□□ -0.6
CTSF-203ENST00000525733 PRC1O43663 620 aa11.27□□□□□ -0.61
CTSF-203ENST00000525733 POLR3DP05423 398 aaPredicted RBP11.27□□□□□ -0.61
CTSF-203ENST00000525733 VIL1P09327 827 aaKnown RBP11.27□□□□□ -0.61
CTSF-203ENST00000525733 CRKP46108 304 aa11.27□□□□□ -0.61
CTSF-203ENST00000525733 TBC1D10CQ8IV04 446 aa11.27□□□□□ -0.61
CTSF-203ENST00000525733 TGFBRAP1Q8WUH2 860 aa11.27□□□□□ -0.61
CTSF-203ENST00000525733 TMEM87BQ96K49 555 aa11.27□□□□□ -0.61
CTSF-203ENST00000525733 TCEANC2Q96MN5 208 aa11.27□□□□□ -0.61
CTSF-203ENST00000525733 LARP6Q9BRS8 491 aaKnown RBP11.27□□□□□ -0.61
CTSF-203ENST00000525733 MTA3Q9BTC8 594 aa11.27□□□□□ -0.61
CTSF-203ENST00000525733 TOMM22Q9NS69 142 aa11.27□□□□□ -0.61
CTSF-203ENST00000525733 USP40Q9NVE5 1235 aa11.27□□□□□ -0.61
CTSF-203ENST00000525733 SERPINA10Q9UK55 444 aa11.27□□□□□ -0.61
CTSF-203ENST00000525733 HDAC9Q9UKV0 1011 aa11.27□□□□□ -0.61
CTSF-203ENST00000525733 CACNA1SQ13698 1873 aa11.27□□□□□ -0.61
CTSF-203ENST00000525733 YDJCA8MPS7 323 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 B4E1Z4 1266 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 TOMM70O94826 608 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 MMP14P50281 582 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 SCNN1DP51172 638 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 RBM5P52756 815 aaKnown RBP eCLIP11.26□□□□□ -0.61
CTSF-203ENST00000525733 RHBDL3P58872 404 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 NUCB2P80303 420 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 PDE4BQ07343 736 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 TOB2Q14106 344 aaPredicted RBP11.26□□□□□ -0.61
CTSF-203ENST00000525733 SART3Q15020 963 aaKnown RBP11.26□□□□□ -0.61
CTSF-203ENST00000525733 TNIP1Q15025 636 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 ME3Q16798 604 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 RRP12Q5JTH9 1297 aaKnown RBP11.26□□□□□ -0.61
CTSF-203ENST00000525733 C9orf131Q5VYM1 1079 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 RSBN1LQ6PCB5 846 aaPredicted RBP11.26□□□□□ -0.61
CTSF-203ENST00000525733 KIAA0825Q8IV33 1275 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 TMTC2Q8N394 836 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 ESR2Q92731 530 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 BRF1Q92994 677 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 ZNF274Q96GC6 653 aaPredicted RBP11.26□□□□□ -0.61
CTSF-203ENST00000525733 ZDHHC15Q96MV8 337 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 AGXT2Q9BYV1 514 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 NBPF3Q9H094 633 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 ZNF287Q9HBT7 754 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 TPCN1Q9ULQ1 816 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 MYH13Q9UKX3 1938 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 LTBP3Q9NS15 1303 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 DLEC1Q9Y238 1755 aa11.26□□□□□ -0.61
CTSF-203ENST00000525733 ERICH2A1L162 156 aa11.25□□□□□ -0.61
CTSF-203ENST00000525733 RAD17O75943 681 aa11.25□□□□□ -0.61
CTSF-203ENST00000525733 FGRP09769 529 aa11.25□□□□□ -0.61
CTSF-203ENST00000525733 PRELPP51888 382 aa11.25□□□□□ -0.61
CTSF-203ENST00000525733 C12orf60Q5U649 245 aa11.25□□□□□ -0.61
CTSF-203ENST00000525733 CIAPIN1Q6FI81 312 aa11.25□□□□□ -0.61
CTSF-203ENST00000525733 CHST3Q7LGC8 479 aa11.25□□□□□ -0.61
CTSF-203ENST00000525733 TTC6Q86TZ1 520 aa11.25□□□□□ -0.61
CTSF-203ENST00000525733 MAPKAPK5Q8IW41 473 aa11.25□□□□□ -0.61
CTSF-203ENST00000525733 TNS4Q8IZW8 715 aa11.25□□□□□ -0.61
CTSF-203ENST00000525733 OGFOD1Q8N543 542 aa11.25□□□□□ -0.61
CTSF-203ENST00000525733 AGBL3Q8NEM8 1001 aa11.25□□□□□ -0.61
CTSF-203ENST00000525733 LRRC2Q9BYS8 371 aa11.25□□□□□ -0.61
CTSF-203ENST00000525733 ZSWIM5Q9P217 1185 aa11.25□□□□□ -0.61
CTSF-203ENST00000525733 MKRN1Q9UHC7 482 aaKnown RBP11.25□□□□□ -0.61
CTSF-203ENST00000525733 SMC3Q9UQE7 1217 aa11.25□□□□□ -0.61
CTSF-203ENST00000525733 NFKBIEO00221 500 aa11.24□□□□□ -0.61
CTSF-203ENST00000525733 PSMD14O00487 310 aa11.24□□□□□ -0.61
CTSF-203ENST00000525733 IFIT3O14879 490 aaKnown RBP11.24□□□□□ -0.61
CTSF-203ENST00000525733 ORC4O43929 436 aa11.24□□□□□ -0.61
CTSF-203ENST00000525733 KDM4AO75164 1064 aa11.24□□□□□ -0.61
CTSF-203ENST00000525733 USP17L8P0C7I0 530 aa11.24□□□□□ -0.61
CTSF-203ENST00000525733 PDIA4P13667 645 aaKnown RBP11.24□□□□□ -0.61
CTSF-203ENST00000525733 EVCP57679 992 aa11.24□□□□□ -0.61
CTSF-203ENST00000525733 TMEM67Q5HYA8 995 aa11.24□□□□□ -0.61
CTSF-203ENST00000525733 APOBEC3HQ6NTF7 200 aaKnown RBP11.24□□□□□ -0.61
CTSF-203ENST00000525733 CDC42EP5Q6NZY7 148 aa11.24□□□□□ -0.61
CTSF-203ENST00000525733 SYNE3Q6ZMZ3 975 aa11.24□□□□□ -0.61
CTSF-203ENST00000525733 CCDC83Q8IWF9 413 aa11.24□□□□□ -0.61
CTSF-203ENST00000525733 STK11IPQ8N1F8 1099 aa11.24□□□□□ -0.61
CTSF-203ENST00000525733 MKNK2Q9HBH9 465 aa11.24□□□□□ -0.61
CTSF-203ENST00000525733 INCENPQ9NQS7 918 aa11.24□□□□□ -0.61
CTSF-203ENST00000525733 NAP1L2Q9ULW6 460 aaPredicted RBP11.24□□□□□ -0.61
CTSF-203ENST00000525733 ANGEL1Q9UNK9 670 aaKnown RBP11.24□□□□□ -0.61
CTSF-203ENST00000525733 CYP2D7A0A087X1C5 515 aa11.23□□□□□ -0.61
CTSF-203ENST00000525733 DHX16O60231 1041 aaKnown RBP11.23□□□□□ -0.61
CTSF-203ENST00000525733 RANBP6O60518 1105 aaKnown RBP11.23□□□□□ -0.61
CTSF-203ENST00000525733 PFKFB2O60825 505 aa11.23□□□□□ -0.61
CTSF-203ENST00000525733 NPM3O75607 178 aaKnown RBP11.23□□□□□ -0.61
CTSF-203ENST00000525733 DDIT3P35638 169 aa11.23□□□□□ -0.61
CTSF-203ENST00000525733 LIFRP42702 1097 aa11.23□□□□□ -0.61
CTSF-203ENST00000525733 EIF6P56537 245 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms