RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 GPR75-ASB3A0A0A6YYF3 556 aa15.59■□□□□ 0.09
CLP1-202ENST00000525602 MANSC4A6NHS7 340 aaPredicted RBP15.59■□□□□ 0.09
CLP1-202ENST00000525602 IFIT2P09913 472 aaKnown RBP15.59■□□□□ 0.09
CLP1-202ENST00000525602 TCP10Q12799 353 aa15.59■□□□□ 0.09
CLP1-202ENST00000525602 CRHR2Q13324 411 aa15.59■□□□□ 0.09
CLP1-202ENST00000525602 CD99L2Q8TCZ2 262 aa15.59■□□□□ 0.09
CLP1-202ENST00000525602 IDI2Q9BXS1 227 aa15.59■□□□□ 0.09
CLP1-202ENST00000525602 PIH1D3Q9NQM4 214 aaKnown RBP15.59■□□□□ 0.09
CLP1-202ENST00000525602 FAM198AQ9UFP1 575 aa15.59■□□□□ 0.09
CLP1-202ENST00000525602 PCDHB15Q9Y5E8 787 aa15.59■□□□□ 0.09
CLP1-202ENST00000525602 DOCK2Q92608 1830 aa15.59■□□□□ 0.09
CLP1-202ENST00000525602 SZT2Q5T011 3432 aa15.58■□□□□ 0.08
CLP1-202ENST00000525602 UNCXA6NJT0 531 aa15.58■□□□□ 0.08
CLP1-202ENST00000525602 LDHCP07864 332 aa15.58■□□□□ 0.08
CLP1-202ENST00000525602 ZBTB48P10074 688 aaPredicted RBP15.58■□□□□ 0.08
CLP1-202ENST00000525602 RHBDL3P58872 404 aa15.58■□□□□ 0.08
CLP1-202ENST00000525602 CNKSR2Q8WXI2 1034 aa15.58■□□□□ 0.08
CLP1-202ENST00000525602 PTPN18Q99952 460 aa15.58■□□□□ 0.08
CLP1-202ENST00000525602 LRRCC1Q9C099 1032 aa15.58■□□□□ 0.08
CLP1-202ENST00000525602 BCL11AQ9H165 835 aa15.58■□□□□ 0.08
CLP1-202ENST00000525602 ELP3Q9H9T3 547 aa15.58■□□□□ 0.08
CLP1-202ENST00000525602 NDUFB9Q9Y6M9 179 aa15.58■□□□□ 0.08
CLP1-202ENST00000525602 WDHD1O75717 1129 aaPredicted RBP15.57■□□□□ 0.08
CLP1-202ENST00000525602 RGS3P49796 1198 aa15.57■□□□□ 0.08
CLP1-202ENST00000525602 NAA16Q6N069 864 aaPredicted RBP15.57■□□□□ 0.08
CLP1-202ENST00000525602 ANKRD13AQ8IZ07 590 aa15.57■□□□□ 0.08
CLP1-202ENST00000525602 HOOK2Q96ED9 719 aa15.57■□□□□ 0.08
CLP1-202ENST00000525602 DCTPP1Q9H773 170 aa15.57■□□□□ 0.08
CLP1-202ENST00000525602 SMARCA5O60264 1052 aaPredicted RBP15.56■□□□□ 0.08
CLP1-202ENST00000525602 IGSF3O75054 1194 aa15.56■□□□□ 0.08
CLP1-202ENST00000525602 ENTPD3O75355 529 aa15.56■□□□□ 0.08
CLP1-202ENST00000525602 ALDH1A1P00352 501 aa15.56■□□□□ 0.08
CLP1-202ENST00000525602 ZFPM1Q8IX07 1006 aa15.56■□□□□ 0.08
CLP1-202ENST00000525602 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.56■□□□□ 0.08
CLP1-202ENST00000525602 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.56■□□□□ 0.08
CLP1-202ENST00000525602 ANTXR1Q9H6X2 564 aa15.56■□□□□ 0.08
CLP1-202ENST00000525602 DDX4Q9NQI0 724 aaKnown RBP15.56■□□□□ 0.08
CLP1-202ENST00000525602 PCDH10Q9P2E7 1040 aa15.56■□□□□ 0.08
CLP1-202ENST00000525602 AK9Q5TCS8 1911 aa15.56■□□□□ 0.08
CLP1-202ENST00000525602 RANBP2P49792 3224 aaKnown RBP15.55■□□□□ 0.08
CLP1-202ENST00000525602 PICALMQ13492 652 aa15.55■□□□□ 0.08
CLP1-202ENST00000525602 DCAF15Q66K64 600 aa15.55■□□□□ 0.08
CLP1-202ENST00000525602 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.55■□□□□ 0.08
CLP1-202ENST00000525602 ADGRA1Q86SQ6 560 aa15.55■□□□□ 0.08
CLP1-202ENST00000525602 OPTNQ96CV9 577 aa15.55■□□□□ 0.08
CLP1-202ENST00000525602 ATRNL1Q5VV63 1379 aa15.55■□□□□ 0.08
CLP1-202ENST00000525602 IDH1O75874 414 aaKnown RBP15.54■□□□□ 0.08
CLP1-202ENST00000525602 MAP4K4O95819 1239 aaPredicted RBP15.54■□□□□ 0.08
CLP1-202ENST00000525602 MAP3K9P80192 1104 aa15.54■□□□□ 0.08
CLP1-202ENST00000525602 VGLL4Q14135 290 aa15.54■□□□□ 0.08
CLP1-202ENST00000525602 SH3BP5LQ7L8J4 393 aa15.54■□□□□ 0.08
CLP1-202ENST00000525602 WRNIP1Q96S55 665 aa15.54■□□□□ 0.08
CLP1-202ENST00000525602 ZNF341Q9BYN7 854 aa15.54■□□□□ 0.08
CLP1-202ENST00000525602 PTPN22Q9Y2R2 807 aa15.54■□□□□ 0.08
CLP1-202ENST00000525602 NPM3O75607 178 aaKnown RBP15.53■□□□□ 0.08
CLP1-202ENST00000525602 MIGA2Q7L4E1 593 aa15.53■□□□□ 0.08
CLP1-202ENST00000525602 TEX11Q8IYF3 940 aa15.53■□□□□ 0.08
CLP1-202ENST00000525602 SH3RF3Q8TEJ3 882 aaPredicted RBP15.53■□□□□ 0.08
CLP1-202ENST00000525602 DNAJC2Q99543 621 aaKnown RBP15.53■□□□□ 0.08
CLP1-202ENST00000525602 NOL10Q9BSC4 688 aaKnown RBP15.53■□□□□ 0.08
CLP1-202ENST00000525602 AATFQ9NY61 560 aaKnown RBP eCLIP15.53■□□□□ 0.08
CLP1-202ENST00000525602 CSADQ9Y600 493 aa15.53■□□□□ 0.08
CLP1-202ENST00000525602 CDK5RAP2Q96SN8 1893 aa15.53■□□□□ 0.08
CLP1-202ENST00000525602 FOCADQ5VW36 1801 aa15.53■□□□□ 0.08
CLP1-202ENST00000525602 COL2A1P02458 1487 aaPredicted RBP15.53■□□□□ 0.08
CLP1-202ENST00000525602 DDTLA6NHG4 134 aaPredicted RBP15.52■□□□□ 0.08
CLP1-202ENST00000525602 BAG3O95817 575 aa15.52■□□□□ 0.08
CLP1-202ENST00000525602 ATP5JP18859 108 aa15.52■□□□□ 0.08
CLP1-202ENST00000525602 CYP7A1P22680 504 aa15.52■□□□□ 0.08
CLP1-202ENST00000525602 INHBEP58166 350 aa15.52■□□□□ 0.08
CLP1-202ENST00000525602 MAP3K12Q12852 859 aa15.52■□□□□ 0.08
CLP1-202ENST00000525602 TTF1Q15361 905 aaPredicted RBP15.52■□□□□ 0.08
CLP1-202ENST00000525602 MAGEB6Q8N7X4 407 aa15.52■□□□□ 0.08
CLP1-202ENST00000525602 BRI3BPQ8WY22 251 aa15.52■□□□□ 0.08
CLP1-202ENST00000525602 ERO1AQ96HE7 468 aa15.52■□□□□ 0.08
CLP1-202ENST00000525602 GOLIM4O00461 696 aa15.51■□□□□ 0.07
CLP1-202ENST00000525602 EN2P19622 333 aaPredicted RBP15.51■□□□□ 0.07
CLP1-202ENST00000525602 PPP4CP60510 307 aa15.51■□□□□ 0.07
CLP1-202ENST00000525602 ZSCAN29Q8IWY8 852 aaPredicted RBP15.51■□□□□ 0.07
CLP1-202ENST00000525602 MS4A4AQ96JQ5 239 aa15.51■□□□□ 0.07
CLP1-202ENST00000525602 BOLA2Q9H3K6 86 aa15.51■□□□□ 0.07
CLP1-202ENST00000525602 EFCC1Q9HA90 598 aa15.51■□□□□ 0.07
CLP1-202ENST00000525602 SNCAIPQ9Y6H5 919 aa15.51■□□□□ 0.07
CLP1-202ENST00000525602 TRIOBPQ9H2D6 2365 aa15.51■□□□□ 0.07
CLP1-202ENST00000525602 TESPA1A2RU30 521 aaPredicted RBP15.5■□□□□ 0.07
CLP1-202ENST00000525602 PLCG2P16885 1265 aa15.5■□□□□ 0.07
CLP1-202ENST00000525602 AAMPQ13685 434 aa15.5■□□□□ 0.07
CLP1-202ENST00000525602 TMED8Q6PL24 325 aaPredicted RBP15.5■□□□□ 0.07
CLP1-202ENST00000525602 FAM43AQ8N2R8 423 aa15.5■□□□□ 0.07
CLP1-202ENST00000525602 ZKSCAN4Q969J2 545 aaPredicted RBP15.5■□□□□ 0.07
CLP1-202ENST00000525602 EDC3Q96F86 508 aaKnown RBP15.5■□□□□ 0.07
CLP1-202ENST00000525602 OTUD5Q96G74 571 aa15.5■□□□□ 0.07
CLP1-202ENST00000525602 HAUS7Q99871 368 aa15.5■□□□□ 0.07
CLP1-202ENST00000525602 OSBPL5Q9H0X9 879 aaPredicted RBP15.5■□□□□ 0.07
CLP1-202ENST00000525602 ZNF112Q9UJU3 913 aa15.5■□□□□ 0.07
CLP1-202ENST00000525602 SUPT16HQ9Y5B9 1047 aaKnown RBP15.5■□□□□ 0.07
CLP1-202ENST00000525602 CCL15-CCL14A0A0B4J2E2 113 aa15.49■□□□□ 0.07
CLP1-202ENST00000525602 SPDYE5A6NIY4 337 aa15.49■□□□□ 0.07
CLP1-202ENST00000525602 MYCP01106 439 aaPredicted RBP15.49■□□□□ 0.07
CLP1-202ENST00000525602 INPP5BP32019 993 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms