RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 NXPE4Q6UWF7 544 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 DDX46Q7L014 1031 aaKnown RBP5.47□□□□□ -1.53
CD44-213ENST00000525209 SH3BP5LQ7L8J4 393 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 ETFBKMTQ8IXQ9 262 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 CLASRPQ8N2M8 674 aaKnown RBP5.47□□□□□ -1.53
CD44-213ENST00000525209 ST13P5Q8NFI4 369 aaPredicted RBP5.47□□□□□ -1.53
CD44-213ENST00000525209 FOXJ1Q92949 421 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 ZNF669Q96BR6 464 aaPredicted RBP5.47□□□□□ -1.53
CD44-213ENST00000525209 TIFAQ96CG3 184 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 MTMR8Q96EF0 704 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 YIPF4Q9BSR8 244 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 PLCB1Q9NQ66 1216 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 SLC5A4Q9NY91 659 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 UBP1Q9NZI7 540 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 GTF2IRD1Q9UHL9 959 aa5.47□□□□□ -1.53
CD44-213ENST00000525209 SUPT16HQ9Y5B9 1047 aaKnown RBP5.47□□□□□ -1.53
CD44-213ENST00000525209 A0A1W2PRQ8 180 aa5.46□□□□□ -1.54
CD44-213ENST00000525209 F6X3S4 739 aa5.46□□□□□ -1.54
CD44-213ENST00000525209 RPN1P04843 607 aaKnown RBP5.46□□□□□ -1.54
CD44-213ENST00000525209 TGFB3P10600 412 aa5.46□□□□□ -1.54
CD44-213ENST00000525209 ZSCAN20P17040 1043 aaPredicted RBP5.46□□□□□ -1.54
CD44-213ENST00000525209 EIF6P56537 245 aaKnown RBP5.46□□□□□ -1.54
CD44-213ENST00000525209 MAP3K10Q02779 954 aa5.46□□□□□ -1.54
CD44-213ENST00000525209 ITKQ08881 620 aa5.46□□□□□ -1.54
CD44-213ENST00000525209 DDX10Q13206 875 aaKnown RBP5.46□□□□□ -1.54
CD44-213ENST00000525209 NBPF1Q3BBV0 1214 aa5.46□□□□□ -1.54
CD44-213ENST00000525209 C8orf34Q49A92 452 aa5.46□□□□□ -1.54
CD44-213ENST00000525209 FAM133BQ5BKY9 247 aaKnown RBP5.46□□□□□ -1.54
CD44-213ENST00000525209 DACT2Q5SW24 774 aa5.46□□□□□ -1.54
CD44-213ENST00000525209 PRPF40BQ6NWY9 871 aaKnown RBP5.46□□□□□ -1.54
CD44-213ENST00000525209 MZT2AQ6P582 158 aa5.46□□□□□ -1.54
CD44-213ENST00000525209 CFAP161Q6P656 301 aa5.46□□□□□ -1.54
CD44-213ENST00000525209 LVRNQ6Q4G3 990 aa5.46□□□□□ -1.54
CD44-213ENST00000525209 SLITRK4Q8IW52 837 aa5.46□□□□□ -1.54
CD44-213ENST00000525209 PI4K2BQ8TCG2 481 aa5.46□□□□□ -1.54
CD44-213ENST00000525209 JPH3Q8WXH2 748 aaPredicted RBP5.46□□□□□ -1.54
CD44-213ENST00000525209 NKD1Q969G9 470 aa5.46□□□□□ -1.54
CD44-213ENST00000525209 RHOVQ96L33 236 aa5.46□□□□□ -1.54
CD44-213ENST00000525209 RHOBTB2Q9BYZ6 727 aa5.46□□□□□ -1.54
CD44-213ENST00000525209 CCDC8Q9H0W5 538 aaPredicted RBP5.46□□□□□ -1.54
CD44-213ENST00000525209 GGNBP2Q9H3C7 697 aa5.46□□□□□ -1.54
CD44-213ENST00000525209 PPT2Q9UMR5 302 aa5.46□□□□□ -1.54
CD44-213ENST00000525209 SPEF1Q9Y4P9 236 aa5.46□□□□□ -1.54
CD44-213ENST00000525209 NACADO15069 1562 aa5.46□□□□□ -1.54
CD44-213ENST00000525209 DNAJC25-GNG10A0A024R161 153 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 hCG_1984214I3L0E3 225 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 NBNO60934 754 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 MICAL2O94851 1124 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 GJB6O95452 261 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 MYCP01106 439 aaPredicted RBP5.45□□□□□ -1.54
CD44-213ENST00000525209 PGRP06401 933 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 U2AF1L5P0DN76 240 aaPredicted RBP5.45□□□□□ -1.54
CD44-213ENST00000525209 SCP2P22307 547 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 SCNN1DP51172 638 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 EIF5P55010 431 aaKnown RBP5.45□□□□□ -1.54
CD44-213ENST00000525209 U2AF1Q01081 240 aaKnown RBP eCLIP5.45□□□□□ -1.54
CD44-213ENST00000525209 CHAF1AQ13111 956 aaPredicted RBP5.45□□□□□ -1.54
CD44-213ENST00000525209 TCIRG1Q13488 830 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 BIRC3Q13489 604 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 CBX2Q14781 532 aaPredicted RBP5.45□□□□□ -1.54
CD44-213ENST00000525209 PPP2R5EQ16537 467 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 LONRF2Q1L5Z9 754 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 CCDC92Q53HC0 331 aaPredicted RBP5.45□□□□□ -1.54
CD44-213ENST00000525209 JAKMIP3Q5VZ66 844 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 TREML4Q6UXN2 200 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 STRA8Q7Z7C7 330 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 RASSF3Q86WH2 238 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 MSL3Q8N5Y2 521 aaKnown RBP5.45□□□□□ -1.54
CD44-213ENST00000525209 VPS37AQ8NEZ2 397 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 RSPH1Q8WYR4 309 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 GJA10Q969M2 543 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 TRIM56Q9BRZ2 755 aaKnown RBP5.45□□□□□ -1.54
CD44-213ENST00000525209 BCO2Q9BYV7 579 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.45□□□□□ -1.54
CD44-213ENST00000525209 FBRSQ9HAH7 460 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 DIS3Q9Y2L1 958 aaKnown RBP5.45□□□□□ -1.54
CD44-213ENST00000525209 MORC2Q9Y6X9 1032 aaPredicted RBP5.45□□□□□ -1.54
CD44-213ENST00000525209 CECR2Q9BXF3 1484 aa5.45□□□□□ -1.54
CD44-213ENST00000525209 APAF1O14727 1248 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 CAPN5O15484 640 aaPredicted RBP5.44□□□□□ -1.54
CD44-213ENST00000525209 RHOBTB3O94955 611 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 FAM153BP0C7A2 387 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 RLBP1P12271 317 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 FOXK2Q01167 660 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 ARID5BQ14865 1188 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 C4orf48Q5BLP8 95 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 LCE2AQ5TA79 106 aaPredicted RBP5.44□□□□□ -1.54
CD44-213ENST00000525209 RNF219Q5W0B1 726 aaPredicted RBP5.44□□□□□ -1.54
CD44-213ENST00000525209 LARP1BQ659C4 914 aaKnown RBP5.44□□□□□ -1.54
CD44-213ENST00000525209 C16orf54Q6UWD8 224 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 TRIM46Q7Z4K8 759 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 SEPT12Q8IYM1 358 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 KIAA1958Q8N8K9 716 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 OR6P1Q8NGX9 317 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 WDR66Q8TBY9 1149 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 USP33Q8TEY7 942 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 ZNF622Q969S3 477 aaKnown RBP eCLIP5.44□□□□□ -1.54
CD44-213ENST00000525209 PGBD4Q96DM1 585 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 TRIM47Q96LD4 638 aa5.44□□□□□ -1.54
CD44-213ENST00000525209 SLC26A8Q96RN1 970 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms