RNA–Protein interactions for RNA: ENST00000524784.1

PACS1-202, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-202ENST00000524784 C9orf131Q5VYM1 1079 aa12.54□□□□□ -0.4
PACS1-202ENST00000524784 DHX32Q7L7V1 743 aaKnown RBP12.54□□□□□ -0.4
PACS1-202ENST00000524784 KRT23Q9C075 422 aa12.54□□□□□ -0.4
PACS1-202ENST00000524784 CNNM2Q9H8M5 875 aa12.54□□□□□ -0.4
PACS1-202ENST00000524784 ANAPC4Q9UJX5 808 aa12.54□□□□□ -0.4
PACS1-202ENST00000524784 H7C1D1 291 aa12.53□□□□□ -0.4
PACS1-202ENST00000524784 PCP11498 1178 aaKnown RBP12.53□□□□□ -0.4
PACS1-202ENST00000524784 RPS6KB1P23443 525 aa12.53□□□□□ -0.4
PACS1-202ENST00000524784 GMPSP49915 693 aaPredicted RBP12.53□□□□□ -0.4
PACS1-202ENST00000524784 FGD1P98174 961 aa12.53□□□□□ -0.4
PACS1-202ENST00000524784 CTDSPL2Q05D32 466 aa12.53□□□□□ -0.4
PACS1-202ENST00000524784 PICALMQ13492 652 aa12.53□□□□□ -0.4
PACS1-202ENST00000524784 STOX1Q6ZVD7 989 aa12.53□□□□□ -0.4
PACS1-202ENST00000524784 TTC6Q86TZ1 520 aa12.53□□□□□ -0.4
PACS1-202ENST00000524784 GPC2Q8N158 579 aa12.53□□□□□ -0.4
PACS1-202ENST00000524784 MTMR14Q8NCE2 650 aa12.53□□□□□ -0.4
PACS1-202ENST00000524784 PRMT6Q96LA8 375 aaPredicted RBP12.53□□□□□ -0.4
PACS1-202ENST00000524784 TBC1D2Q9BYX2 928 aa12.53□□□□□ -0.4
PACS1-202ENST00000524784 TOMM22Q9NS69 142 aa12.53□□□□□ -0.4
PACS1-202ENST00000524784 MKRN1Q9UHC7 482 aaKnown RBP12.53□□□□□ -0.4
PACS1-202ENST00000524784 SAP30BPQ9UHR5 308 aaKnown RBP12.53□□□□□ -0.4
PACS1-202ENST00000524784 CNOT7Q9UIV1 285 aaKnown RBP12.53□□□□□ -0.4
PACS1-202ENST00000524784 TAF6LQ9Y6J9 622 aa12.53□□□□□ -0.4
PACS1-202ENST00000524784 FLT1P17948 1338 aa12.53□□□□□ -0.4
PACS1-202ENST00000524784 ZNF541Q9H0D2 1346 aa12.53□□□□□ -0.4
PACS1-202ENST00000524784 DCAF8L1A6NGE4 600 aa12.52□□□□□ -0.41
PACS1-202ENST00000524784 SPDYE2BA6NHP3 402 aa12.52□□□□□ -0.41
PACS1-202ENST00000524784 NPM3O75607 178 aaKnown RBP12.52□□□□□ -0.41
PACS1-202ENST00000524784 WDHD1O75717 1129 aaPredicted RBP12.52□□□□□ -0.41
PACS1-202ENST00000524784 SPDYE6P0CI01 402 aa12.52□□□□□ -0.41
PACS1-202ENST00000524784 MCM5P33992 734 aa12.52□□□□□ -0.41
PACS1-202ENST00000524784 ZNF280AP59817 542 aaPredicted RBP12.52□□□□□ -0.41
PACS1-202ENST00000524784 PDE4BQ07343 736 aa12.52□□□□□ -0.41
PACS1-202ENST00000524784 ANKRD1Q15327 319 aa12.52□□□□□ -0.41
PACS1-202ENST00000524784 C12orf60Q5U649 245 aa12.52□□□□□ -0.41
PACS1-202ENST00000524784 DPY19L2Q6NUT2 758 aa12.52□□□□□ -0.41
PACS1-202ENST00000524784 TBC1D10CQ8IV04 446 aa12.52□□□□□ -0.41
PACS1-202ENST00000524784 MICALL2Q8IY33 904 aa12.52□□□□□ -0.41
PACS1-202ENST00000524784 STK11IPQ8N1F8 1099 aa12.52□□□□□ -0.41
PACS1-202ENST00000524784 STAG1Q8WVM7 1258 aa12.52□□□□□ -0.41
PACS1-202ENST00000524784 IDI2Q9BXS1 227 aa12.52□□□□□ -0.41
PACS1-202ENST00000524784 TDRD3Q9H7E2 651 aaKnown RBP12.52□□□□□ -0.41
PACS1-202ENST00000524784 ZNF287Q9HBT7 754 aa12.52□□□□□ -0.41
PACS1-202ENST00000524784 MYOZ2Q9NPC6 264 aa12.52□□□□□ -0.41
PACS1-202ENST00000524784 PCDHAC2Q9Y5I4 1007 aa12.52□□□□□ -0.41
PACS1-202ENST00000524784 PSME4Q14997 1843 aa12.51□□□□□ -0.41
PACS1-202ENST00000524784 CYP2D7A0A087X1C5 515 aa12.51□□□□□ -0.41
PACS1-202ENST00000524784 HLA-DOAP06340 250 aa12.51□□□□□ -0.41
PACS1-202ENST00000524784 CYP2D6P10635 497 aa12.51□□□□□ -0.41
PACS1-202ENST00000524784 CPA1P15085 419 aa12.51□□□□□ -0.41
PACS1-202ENST00000524784 NT5C2P49902 561 aa12.51□□□□□ -0.41
PACS1-202ENST00000524784 RRP12Q5JTH9 1297 aaKnown RBP12.51□□□□□ -0.41
PACS1-202ENST00000524784 RBM26Q5T8P6 1007 aaKnown RBP12.51□□□□□ -0.41
PACS1-202ENST00000524784 NBPF3Q9H094 633 aa12.51□□□□□ -0.41
PACS1-202ENST00000524784 OSBPL5Q9H0X9 879 aaPredicted RBP12.51□□□□□ -0.41
PACS1-202ENST00000524784 ALDH8A1Q9H2A2 487 aaPredicted RBP12.51□□□□□ -0.41
PACS1-202ENST00000524784 ZNF70Q9UC06 446 aaPredicted RBP12.51□□□□□ -0.41
PACS1-202ENST00000524784 B4E1Z4 1266 aa12.5□□□□□ -0.41
PACS1-202ENST00000524784 K7ELQ4 463 aaPredicted RBP12.5□□□□□ -0.41
PACS1-202ENST00000524784 ENTPD3O75355 529 aa12.5□□□□□ -0.41
PACS1-202ENST00000524784 LMOD1P29536 600 aaPredicted RBP12.5□□□□□ -0.41
PACS1-202ENST00000524784 AK2P54819 239 aa12.5□□□□□ -0.41
PACS1-202ENST00000524784 EXOSC10Q01780 885 aaKnown RBP12.5□□□□□ -0.41
PACS1-202ENST00000524784 ZSCAN29Q8IWY8 852 aaPredicted RBP12.5□□□□□ -0.41
PACS1-202ENST00000524784 ESR2Q92731 530 aa12.5□□□□□ -0.41
PACS1-202ENST00000524784 TTC14Q96N46 770 aa12.5□□□□□ -0.41
PACS1-202ENST00000524784 DHX36Q9H2U1 1008 aaKnown RBP12.5□□□□□ -0.41
PACS1-202ENST00000524784 MKNK2Q9HBH9 465 aa12.5□□□□□ -0.41
PACS1-202ENST00000524784 LIMCH1Q9UPQ0 1083 aa12.5□□□□□ -0.41
PACS1-202ENST00000524784 WDR19Q8NEZ3 1342 aa12.5□□□□□ -0.41
PACS1-202ENST00000524784 CLRN2A0PK11 232 aa12.49□□□□□ -0.41
PACS1-202ENST00000524784 PRC1O43663 620 aa12.49□□□□□ -0.41
PACS1-202ENST00000524784 KDM4AO75164 1064 aa12.49□□□□□ -0.41
PACS1-202ENST00000524784 HSP90AA1P07900 732 aaKnown RBP12.49□□□□□ -0.41
PACS1-202ENST00000524784 FGRP09769 529 aa12.49□□□□□ -0.41
PACS1-202ENST00000524784 CACNB3P54284 484 aa12.49□□□□□ -0.41
PACS1-202ENST00000524784 TCP10Q12799 353 aa12.49□□□□□ -0.41
PACS1-202ENST00000524784 NFIAQ12857 509 aa12.49□□□□□ -0.41
PACS1-202ENST00000524784 SLC4A8Q2Y0W8 1093 aa12.49□□□□□ -0.41
PACS1-202ENST00000524784 SPDYE2Q495Y8 402 aa12.49□□□□□ -0.41
PACS1-202ENST00000524784 Q6ZUG5 572 aa12.49□□□□□ -0.41
PACS1-202ENST00000524784 NOL8Q76FK4 1167 aaKnown RBP12.49□□□□□ -0.41
PACS1-202ENST00000524784 MB21D2Q8IYB1 491 aaPredicted RBP12.49□□□□□ -0.41
PACS1-202ENST00000524784 ZNF444Q8N0Y2 327 aaPredicted RBP12.49□□□□□ -0.41
PACS1-202ENST00000524784 ZSCAN31Q96LW9 406 aaPredicted RBP12.49□□□□□ -0.41
PACS1-202ENST00000524784 TCEANC2Q96MN5 208 aa12.49□□□□□ -0.41
PACS1-202ENST00000524784 VEZTQ9HBM0 779 aa12.49□□□□□ -0.41
PACS1-202ENST00000524784 DDX4Q9NQI0 724 aaKnown RBP12.49□□□□□ -0.41
PACS1-202ENST00000524784 INCENPQ9NQS7 918 aa12.49□□□□□ -0.41
PACS1-202ENST00000524784 GPRC5DQ9NZD1 345 aa12.49□□□□□ -0.41
PACS1-202ENST00000524784 ZNF646O15015 1829 aaPredicted RBP12.48□□□□□ -0.41
PACS1-202ENST00000524784 NEDD4P46934 1319 aa12.48□□□□□ -0.41
PACS1-202ENST00000524784 ZC3H4Q9UPT8 1303 aaKnown RBP12.48□□□□□ -0.41
PACS1-202ENST00000524784 SHTN1A0MZ66 631 aa12.48□□□□□ -0.41
PACS1-202ENST00000524784 ERICH2A1L162 156 aa12.48□□□□□ -0.41
PACS1-202ENST00000524784 TCP10L2B9ZVM9 353 aa12.48□□□□□ -0.41
PACS1-202ENST00000524784 WNT10BO00744 389 aa12.48□□□□□ -0.41
PACS1-202ENST00000524784 ORC4O43929 436 aa12.48□□□□□ -0.41
PACS1-202ENST00000524784 RANBP6O60518 1105 aaKnown RBP12.48□□□□□ -0.41
PACS1-202ENST00000524784 DDNO94850 711 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms