RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 MAP3K14Q99558 947 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 PIH1D3Q9NQM4 214 aaKnown RBP9.59□□□□□ -0.87
CHD7-202ENST00000524602 IFNKQ9P0W0 207 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 HOOK1Q9UJC3 728 aaKnown RBP9.59□□□□□ -0.87
CHD7-202ENST00000524602 BCL9O00512 1426 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 WDHD1O75717 1129 aaPredicted RBP9.58□□□□□ -0.88
CHD7-202ENST00000524602 NTRK3Q16288 839 aa9.58□□□□□ -0.88
CHD7-202ENST00000524602 CCDC102BQ68D86 513 aa9.58□□□□□ -0.88
CHD7-202ENST00000524602 ERCC4Q92889 916 aaPredicted RBP9.58□□□□□ -0.88
CHD7-202ENST00000524602 AIDAQ96BJ3 306 aa9.58□□□□□ -0.88
CHD7-202ENST00000524602 STRBPQ96SI9 672 aaKnown RBP9.58□□□□□ -0.88
CHD7-202ENST00000524602 KRT23Q9C075 422 aa9.58□□□□□ -0.88
CHD7-202ENST00000524602 LY9Q9HBG7 655 aa9.58□□□□□ -0.88
CHD7-202ENST00000524602 PATL2C9JE40 543 aaKnown RBP9.58□□□□□ -0.88
CHD7-202ENST00000524602 IDH1O75874 414 aaKnown RBP9.58□□□□□ -0.88
CHD7-202ENST00000524602 APPP05067 770 aa9.58□□□□□ -0.88
CHD7-202ENST00000524602 SYTL4Q96C24 671 aaPredicted RBP9.58□□□□□ -0.88
CHD7-202ENST00000524602 CCDC85AQ96PX6 553 aaPredicted RBP9.58□□□□□ -0.88
CHD7-202ENST00000524602 A0A087WWV3 80 aa9.58□□□□□ -0.88
CHD7-202ENST00000524602 GOLGA8AA7E2F4 631 aa9.58□□□□□ -0.88
CHD7-202ENST00000524602 GNAT2P19087 354 aa9.58□□□□□ -0.88
CHD7-202ENST00000524602 FGFR2P21802 821 aa9.58□□□□□ -0.88
CHD7-202ENST00000524602 MYL5Q02045 173 aa9.58□□□□□ -0.88
CHD7-202ENST00000524602 TMC6Q7Z403 805 aa9.58□□□□□ -0.88
CHD7-202ENST00000524602 ZNF592Q92610 1267 aa9.58□□□□□ -0.88
CHD7-202ENST00000524602 NUTM2BA6NNL0 878 aaPredicted RBP9.57□□□□□ -0.88
CHD7-202ENST00000524602 NUTM2EB1AL46 878 aaPredicted RBP9.57□□□□□ -0.88
CHD7-202ENST00000524602 FMNL1O95466 1100 aaPredicted RBP9.57□□□□□ -0.88
CHD7-202ENST00000524602 ZSCAN20P17040 1043 aaPredicted RBP9.57□□□□□ -0.88
CHD7-202ENST00000524602 PIP4K2BP78356 416 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 FANCCQ00597 558 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 SSRP1Q08945 709 aaKnown RBP9.57□□□□□ -0.88
CHD7-202ENST00000524602 MAP3K12Q12852 859 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 TMEM67Q5HYA8 995 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 ARMCX5Q6P1M9 558 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 SHC4Q6S5L8 630 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 NFXL1Q6ZNB6 911 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 NUTM2AQ8IVF1 878 aaPredicted RBP9.57□□□□□ -0.88
CHD7-202ENST00000524602 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.57□□□□□ -0.88
CHD7-202ENST00000524602 BCORQ6W2J9 1755 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 SPDYE4A6NLX3 237 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 B4E1Z4 1266 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 CYP19A1P11511 503 aaPredicted RBP9.57□□□□□ -0.88
CHD7-202ENST00000524602 SLC5A1P13866 664 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 IFNAR1P17181 557 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 CDC27P30260 824 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 HLFQ16534 295 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 OLFM4Q6UX06 510 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 FCHSD1Q86WN1 690 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 ZNF397Q8NF99 534 aaPredicted RBP9.57□□□□□ -0.88
CHD7-202ENST00000524602 SLC4A9Q96Q91 983 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 GJB4Q9NTQ9 266 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 TRMT112Q9UI30 125 aaKnown RBP9.57□□□□□ -0.88
CHD7-202ENST00000524602 SLC12A7Q9Y666 1083 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 UBN2Q6ZU65 1347 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.57□□□□□ -0.88
CHD7-202ENST00000524602 SLU7O95391 586 aaKnown RBP9.57□□□□□ -0.88
CHD7-202ENST00000524602 MARCKSP29966 332 aaPredicted RBP9.57□□□□□ -0.88
CHD7-202ENST00000524602 E4F1Q66K89 784 aaPredicted RBP9.57□□□□□ -0.88
CHD7-202ENST00000524602 TMTC2Q8N394 836 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 PPP1R13BQ96KQ4 1090 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 L2HGDHQ9H9P8 463 aa9.57□□□□□ -0.88
CHD7-202ENST00000524602 MORC2Q9Y6X9 1032 aaPredicted RBP9.57□□□□□ -0.88
CHD7-202ENST00000524602 SPATA31A1Q5TZJ5 1347 aa9.56□□□□□ -0.88
CHD7-202ENST00000524602 BIN1O00499 593 aa9.56□□□□□ -0.88
CHD7-202ENST00000524602 IL6STP40189 918 aaPredicted RBP9.56□□□□□ -0.88
CHD7-202ENST00000524602 PHKA1P46020 1223 aa9.56□□□□□ -0.88
CHD7-202ENST00000524602 SART3Q15020 963 aaKnown RBP9.56□□□□□ -0.88
CHD7-202ENST00000524602 SAFBQ15424 915 aaKnown RBP eCLIP9.56□□□□□ -0.88
CHD7-202ENST00000524602 MICU3Q86XE3 530 aa9.56□□□□□ -0.88
CHD7-202ENST00000524602 RAB11FIP4Q86YS3 637 aa9.56□□□□□ -0.88
CHD7-202ENST00000524602 KRI1Q8N9T8 703 aaKnown RBP9.56□□□□□ -0.88
CHD7-202ENST00000524602 SPATA5Q8NB90 893 aa9.56□□□□□ -0.88
CHD7-202ENST00000524602 FBXW7Q969H0 707 aa9.56□□□□□ -0.88
CHD7-202ENST00000524602 NAPBQ9H115 298 aa9.56□□□□□ -0.88
CHD7-202ENST00000524602 PNPLA7Q6ZV29 1317 aa9.56□□□□□ -0.88
CHD7-202ENST00000524602 LAMB2P55268 1798 aa9.56□□□□□ -0.88
CHD7-202ENST00000524602 CCDC196A0A1B0GTZ2 297 aa9.56□□□□□ -0.88
CHD7-202ENST00000524602 CDK11BP21127 795 aaKnown RBP9.56□□□□□ -0.88
CHD7-202ENST00000524602 GPTP24298 496 aa9.56□□□□□ -0.88
CHD7-202ENST00000524602 AKNAD1Q5T1N1 836 aa9.56□□□□□ -0.88
CHD7-202ENST00000524602 KRBA2Q6ZNG9 492 aa9.56□□□□□ -0.88
CHD7-202ENST00000524602 NOSTRINQ8IVI9 506 aa9.56□□□□□ -0.88
CHD7-202ENST00000524602 IFNL3Q8IZI9 196 aa9.56□□□□□ -0.88
CHD7-202ENST00000524602 STAG1Q8WVM7 1258 aa9.56□□□□□ -0.88
CHD7-202ENST00000524602 NACAP1Q9BZK3 213 aa9.56□□□□□ -0.88
CHD7-202ENST00000524602 HSD3B7Q9H2F3 369 aa9.56□□□□□ -0.88
CHD7-202ENST00000524602 FOXP1Q9H334 677 aaPredicted RBP9.56□□□□□ -0.88
CHD7-202ENST00000524602 FAM217BQ9NTX9 383 aaPredicted RBP9.56□□□□□ -0.88
CHD7-202ENST00000524602 TRMT1Q9NXH9 659 aaKnown RBP9.56□□□□□ -0.88
CHD7-202ENST00000524602 DDX41Q9UJV9 622 aaKnown RBP9.56□□□□□ -0.88
CHD7-202ENST00000524602 WWC3Q9ULE0 1092 aa9.56□□□□□ -0.88
CHD7-202ENST00000524602 RANBP6O60518 1105 aaKnown RBP9.55□□□□□ -0.88
CHD7-202ENST00000524602 PPP2R5BQ15173 497 aa9.55□□□□□ -0.88
CHD7-202ENST00000524602 TRIM22Q8IYM9 498 aa9.55□□□□□ -0.88
CHD7-202ENST00000524602 ZNF34Q8IZ26 560 aa9.55□□□□□ -0.88
CHD7-202ENST00000524602 ZNF579Q8NAF0 562 aaKnown RBP9.55□□□□□ -0.88
CHD7-202ENST00000524602 PHKBQ93100 1093 aa9.55□□□□□ -0.88
CHD7-202ENST00000524602 AIFM3Q96NN9 605 aa9.55□□□□□ -0.88
CHD7-202ENST00000524602 DACH1Q9UI36 760 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms