RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 KRT26Q7Z3Y9 468 aa8.5□□□□□ -1.05
VPS11-201ENST00000524454 ZNF710Q8N1W2 664 aa8.5□□□□□ -1.05
VPS11-201ENST00000524454 TDRD7Q8NHU6 1098 aaKnown RBP8.5□□□□□ -1.05
VPS11-201ENST00000524454 DCPSQ96C86 337 aaKnown RBP8.5□□□□□ -1.05
VPS11-201ENST00000524454 ZNF512BQ96KM6 892 aaPredicted RBP8.5□□□□□ -1.05
VPS11-201ENST00000524454 ANTXR1Q9H6X2 564 aa8.5□□□□□ -1.05
VPS11-201ENST00000524454 WDR70Q9NW82 654 aa8.5□□□□□ -1.05
VPS11-201ENST00000524454 K7ELQ4 463 aaPredicted RBP8.49□□□□□ -1.05
VPS11-201ENST00000524454 FRAT2O75474 233 aaPredicted RBP8.49□□□□□ -1.05
VPS11-201ENST00000524454 ADORA1P30542 326 aa8.49□□□□□ -1.05
VPS11-201ENST00000524454 VEGFBP49765 207 aa8.49□□□□□ -1.05
VPS11-201ENST00000524454 TFCP2Q12800 502 aa8.49□□□□□ -1.05
VPS11-201ENST00000524454 ATP2B3Q16720 1220 aa8.49□□□□□ -1.05
VPS11-201ENST00000524454 CDC37L1Q7L3B6 337 aa8.49□□□□□ -1.05
VPS11-201ENST00000524454 FBXO33Q7Z6M2 555 aa8.49□□□□□ -1.05
VPS11-201ENST00000524454 VPS37DQ86XT2 251 aa8.49□□□□□ -1.05
VPS11-201ENST00000524454 ZC3H15Q8WU90 426 aaKnown RBP8.49□□□□□ -1.05
VPS11-201ENST00000524454 KCNB2Q92953 911 aa8.49□□□□□ -1.05
VPS11-201ENST00000524454 RILPL2Q969X0 211 aa8.49□□□□□ -1.05
VPS11-201ENST00000524454 HAUS7Q99871 368 aa8.49□□□□□ -1.05
VPS11-201ENST00000524454 DIAPH3Q9NSV4 1193 aa8.49□□□□□ -1.05
VPS11-201ENST00000524454 MYO3BQ8WXR4 1341 aa8.49□□□□□ -1.05
VPS11-201ENST00000524454 CLRN2A0PK11 232 aa8.48□□□□□ -1.05
VPS11-201ENST00000524454 WNT10BO00744 389 aa8.48□□□□□ -1.05
VPS11-201ENST00000524454 DPYSL4O14531 572 aa8.48□□□□□ -1.05
VPS11-201ENST00000524454 IFIT1P09914 478 aaKnown RBP8.48□□□□□ -1.05
VPS11-201ENST00000524454 SLC5A1P13866 664 aa8.48□□□□□ -1.05
VPS11-201ENST00000524454 HSPA4P34932 840 aa8.48□□□□□ -1.05
VPS11-201ENST00000524454 DDIT3P35638 169 aa8.48□□□□□ -1.05
VPS11-201ENST00000524454 RBM5P52756 815 aaKnown RBP eCLIP8.48□□□□□ -1.05
VPS11-201ENST00000524454 CAVIN4Q5BKX8 364 aa8.48□□□□□ -1.05
VPS11-201ENST00000524454 MFSD14BQ5SR56 506 aa8.48□□□□□ -1.05
VPS11-201ENST00000524454 CYP4F22Q6NT55 531 aa8.48□□□□□ -1.05
VPS11-201ENST00000524454 KIAA1211Q6ZU35 1233 aa8.48□□□□□ -1.05
VPS11-201ENST00000524454 SULF1Q8IWU6 871 aa8.48□□□□□ -1.05
VPS11-201ENST00000524454 OGFOD1Q8N543 542 aa8.48□□□□□ -1.05
VPS11-201ENST00000524454 MARVELD3Q96A59 401 aa8.48□□□□□ -1.05
VPS11-201ENST00000524454 CDCA5Q96FF9 252 aa8.48□□□□□ -1.05
VPS11-201ENST00000524454 CEP126Q9P2H0 1117 aa8.48□□□□□ -1.05
VPS11-201ENST00000524454 DBNLQ9UJU6 430 aaKnown RBP8.48□□□□□ -1.05
VPS11-201ENST00000524454 FAM205AQ6ZU69 1335 aa8.48□□□□□ -1.05
VPS11-201ENST00000524454 THSD7BQ9C0I4 1608 aa8.47□□□□□ -1.05
VPS11-201ENST00000524454 RASSF10A6NK89 507 aa8.47□□□□□ -1.05
VPS11-201ENST00000524454 IGSF3O75054 1194 aa8.47□□□□□ -1.05
VPS11-201ENST00000524454 AOC2O75106 756 aa8.47□□□□□ -1.05
VPS11-201ENST00000524454 NUDT7P0C024 238 aa8.47□□□□□ -1.05
VPS11-201ENST00000524454 PHKA1P46020 1223 aa8.47□□□□□ -1.05
VPS11-201ENST00000524454 TIMM10P62072 90 aa8.47□□□□□ -1.05
VPS11-201ENST00000524454 DLGAP5Q15398 846 aa8.47□□□□□ -1.05
VPS11-201ENST00000524454 DEFB115Q30KQ5 88 aa8.47□□□□□ -1.05
VPS11-201ENST00000524454 CFAP100Q494V2 611 aa8.47□□□□□ -1.05
VPS11-201ENST00000524454 MOB2Q70IA6 237 aa8.47□□□□□ -1.05
VPS11-201ENST00000524454 JMYQ8N9B5 988 aa8.47□□□□□ -1.05
VPS11-201ENST00000524454 LPIN2Q92539 896 aa8.47□□□□□ -1.05
VPS11-201ENST00000524454 TM6SF1Q9BZW5 370 aa8.47□□□□□ -1.05
VPS11-201ENST00000524454 ANO2Q9NQ90 1003 aa8.47□□□□□ -1.05
VPS11-201ENST00000524454 CHMP5Q9NZZ3 219 aa8.47□□□□□ -1.05
VPS11-201ENST00000524454 HMG20BQ9P0W2 317 aa8.47□□□□□ -1.05
VPS11-201ENST00000524454 HDAC9Q9UKV0 1011 aa8.47□□□□□ -1.05
VPS11-201ENST00000524454 TTF2Q9UNY4 1162 aaKnown RBP8.47□□□□□ -1.05
VPS11-201ENST00000524454 FZD1Q9UP38 647 aa8.47□□□□□ -1.05
VPS11-201ENST00000524454 TLL2Q9Y6L7 1015 aa8.47□□□□□ -1.05
VPS11-201ENST00000524454 ZFYP08048 801 aaPredicted RBP8.46□□□□□ -1.06
VPS11-201ENST00000524454 HSPA1AP0DMV8 641 aaKnown RBP8.46□□□□□ -1.06
VPS11-201ENST00000524454 HSPA1BP0DMV9 641 aaKnown RBP8.46□□□□□ -1.06
VPS11-201ENST00000524454 PDIA4P13667 645 aaKnown RBP8.46□□□□□ -1.06
VPS11-201ENST00000524454 PTMSP20962 102 aa8.46□□□□□ -1.06
VPS11-201ENST00000524454 PRKG1Q13976 671 aa8.46□□□□□ -1.06
VPS11-201ENST00000524454 TSGA10IPQ3SY00 556 aa8.46□□□□□ -1.06
VPS11-201ENST00000524454 TSHZ3Q63HK5 1081 aa8.46□□□□□ -1.06
VPS11-201ENST00000524454 TMED8Q6PL24 325 aaPredicted RBP8.46□□□□□ -1.06
VPS11-201ENST00000524454 SAPCD2Q86UD0 394 aa8.46□□□□□ -1.06
VPS11-201ENST00000524454 KBTBD3Q8NAB2 608 aa8.46□□□□□ -1.06
VPS11-201ENST00000524454 ZBED3Q96IU2 234 aaPredicted RBP8.46□□□□□ -1.06
VPS11-201ENST00000524454 CAPNS2Q96L46 248 aa8.46□□□□□ -1.06
VPS11-201ENST00000524454 PRMT6Q96LA8 375 aaPredicted RBP8.46□□□□□ -1.06
VPS11-201ENST00000524454 NEUROD6Q96NK8 337 aa8.46□□□□□ -1.06
VPS11-201ENST00000524454 LSG1Q9H089 658 aaKnown RBP8.46□□□□□ -1.06
VPS11-201ENST00000524454 VEZTQ9HBM0 779 aa8.46□□□□□ -1.06
VPS11-201ENST00000524454 GBA2Q9HCG7 927 aaPredicted RBP8.46□□□□□ -1.06
VPS11-201ENST00000524454 CWC22Q9HCG8 908 aaKnown RBP8.46□□□□□ -1.06
VPS11-201ENST00000524454 ARIH1Q9Y4X5 557 aaPredicted RBP8.46□□□□□ -1.06
VPS11-201ENST00000524454 MYO5AQ9Y4I1 1855 aaKnown RBP8.46□□□□□ -1.06
VPS11-201ENST00000524454 WDR33Q9C0J8 1336 aaKnown RBP8.46□□□□□ -1.06
VPS11-201ENST00000524454 PAPPA2Q9BXP8 1791 aa8.45□□□□□ -1.06
VPS11-201ENST00000524454 MYH2Q9UKX2 1941 aa8.45□□□□□ -1.06
VPS11-201ENST00000524454 OTOFQ9HC10 1997 aa8.45□□□□□ -1.06
VPS11-201ENST00000524454 A0A1B0GUL7 405 aa8.45□□□□□ -1.06
VPS11-201ENST00000524454 CRKP46108 304 aa8.45□□□□□ -1.06
VPS11-201ENST00000524454 CACNB3P54284 484 aa8.45□□□□□ -1.06
VPS11-201ENST00000524454 HUNKP57058 714 aa8.45□□□□□ -1.06
VPS11-201ENST00000524454 FKBP1AP62942 108 aaKnown RBP8.45□□□□□ -1.06
VPS11-201ENST00000524454 CCDC158Q5M9N0 1113 aa8.45□□□□□ -1.06
VPS11-201ENST00000524454 RNF20Q5VTR2 975 aa8.45□□□□□ -1.06
VPS11-201ENST00000524454 MAP4K1Q92918 833 aa8.45□□□□□ -1.06
VPS11-201ENST00000524454 XAGE2Q96GT9 111 aa8.45□□□□□ -1.06
VPS11-201ENST00000524454 INTS4Q96HW7 963 aaKnown RBP8.45□□□□□ -1.06
VPS11-201ENST00000524454 ZIC5Q96T25 663 aa8.45□□□□□ -1.06
VPS11-201ENST00000524454 CCDC8Q9H0W5 538 aaPredicted RBP8.45□□□□□ -1.06
VPS11-201ENST00000524454 BCL11AQ9H165 835 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms