RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 SCRN1Q12765 414 aa11.68□□□□□ -0.54
VPS13B-212ENST00000524330 SGMS1Q86VZ5 419 aa11.68□□□□□ -0.54
VPS13B-212ENST00000524330 SMARCC2Q8TAQ2 1214 aa11.68□□□□□ -0.54
VPS13B-212ENST00000524330 SDR42E1Q8WUS8 393 aa11.68□□□□□ -0.54
VPS13B-212ENST00000524330 FBXW7Q969H0 707 aa11.68□□□□□ -0.54
VPS13B-212ENST00000524330 ISY1Q9ULR0 285 aaKnown RBP11.68□□□□□ -0.54
VPS13B-212ENST00000524330 DDX49Q9Y6V7 483 aaKnown RBP11.68□□□□□ -0.54
VPS13B-212ENST00000524330 CHD4Q14839 1912 aa11.68□□□□□ -0.54
VPS13B-212ENST00000524330 ORC4O43929 436 aa11.67□□□□□ -0.54
VPS13B-212ENST00000524330 POLR3DP05423 398 aaPredicted RBP11.67□□□□□ -0.54
VPS13B-212ENST00000524330 GTF2IP78347 998 aa11.67□□□□□ -0.54
VPS13B-212ENST00000524330 CCT2P78371 535 aaKnown RBP11.67□□□□□ -0.54
VPS13B-212ENST00000524330 FOXD4L5Q5VV16 416 aaPredicted RBP11.67□□□□□ -0.54
VPS13B-212ENST00000524330 CHST3Q7LGC8 479 aa11.67□□□□□ -0.54
VPS13B-212ENST00000524330 ADGRA1Q86SQ6 560 aa11.67□□□□□ -0.54
VPS13B-212ENST00000524330 RTKN2Q8IZC4 609 aa11.67□□□□□ -0.54
VPS13B-212ENST00000524330 TTLL6Q8N841 843 aa11.67□□□□□ -0.54
VPS13B-212ENST00000524330 FOXD4L4Q8WXT5 416 aaPredicted RBP11.67□□□□□ -0.54
VPS13B-212ENST00000524330 VPS33BQ9H267 617 aa11.67□□□□□ -0.54
VPS13B-212ENST00000524330 DCP1AQ9NPI6 582 aaPredicted RBP11.67□□□□□ -0.54
VPS13B-212ENST00000524330 ZDHHC9Q9Y397 364 aa11.67□□□□□ -0.54
VPS13B-212ENST00000524330 NEDD4P46934 1319 aa11.66□□□□□ -0.54
VPS13B-212ENST00000524330 GPR75-ASB3A0A0A6YYF3 556 aa11.66□□□□□ -0.54
VPS13B-212ENST00000524330 PTPDC1A2A3K4 754 aa11.66□□□□□ -0.54
VPS13B-212ENST00000524330 GOLGA8AA7E2F4 631 aa11.66□□□□□ -0.54
VPS13B-212ENST00000524330 USP17L12C9JPN9 530 aa11.66□□□□□ -0.54
VPS13B-212ENST00000524330 USP17L21D6R901 530 aa11.66□□□□□ -0.54
VPS13B-212ENST00000524330 RANBP6O60518 1105 aaKnown RBP11.66□□□□□ -0.54
VPS13B-212ENST00000524330 ANTXR2P58335 489 aa11.66□□□□□ -0.54
VPS13B-212ENST00000524330 KRT85P78386 507 aa11.66□□□□□ -0.54
VPS13B-212ENST00000524330 PKP1Q13835 747 aa11.66□□□□□ -0.54
VPS13B-212ENST00000524330 TRIM29Q14134 588 aa11.66□□□□□ -0.54
VPS13B-212ENST00000524330 KLHL40Q2TBA0 621 aa11.66□□□□□ -0.54
VPS13B-212ENST00000524330 CCDC93Q567U6 631 aa11.66□□□□□ -0.54
VPS13B-212ENST00000524330 ATL3Q6DD88 541 aa11.66□□□□□ -0.54
VPS13B-212ENST00000524330 CTR9Q6PD62 1173 aa11.66□□□□□ -0.54
VPS13B-212ENST00000524330 TEX11Q8IYF3 940 aa11.66□□□□□ -0.54
VPS13B-212ENST00000524330 TRIM22Q8IYM9 498 aa11.66□□□□□ -0.54
VPS13B-212ENST00000524330 NSUN7Q8NE18 718 aaKnown RBP11.66□□□□□ -0.54
VPS13B-212ENST00000524330 RTFDC1Q9BY42 306 aaPredicted RBP11.66□□□□□ -0.54
VPS13B-212ENST00000524330 SCAND2PQ9GZW5 306 aaPredicted RBP11.66□□□□□ -0.54
VPS13B-212ENST00000524330 MCM9Q9NXL9 1143 aa11.66□□□□□ -0.54
VPS13B-212ENST00000524330 ZSWIM5Q9P217 1185 aa11.66□□□□□ -0.54
VPS13B-212ENST00000524330 CFAP45Q9UL16 551 aa11.66□□□□□ -0.54
VPS13B-212ENST00000524330 TAOK2Q9UL54 1235 aa11.66□□□□□ -0.54
VPS13B-212ENST00000524330 MTMR6Q9Y217 621 aa11.66□□□□□ -0.54
VPS13B-212ENST00000524330 A0A0G2JLW4 131 aa11.65□□□□□ -0.54
VPS13B-212ENST00000524330 PRPF40AO75400 957 aaKnown RBP11.65□□□□□ -0.54
VPS13B-212ENST00000524330 FGRP09769 529 aa11.65□□□□□ -0.54
VPS13B-212ENST00000524330 BTDP43251 543 aa11.65□□□□□ -0.54
VPS13B-212ENST00000524330 AKAP17AQ02040 695 aaKnown RBP11.65□□□□□ -0.54
VPS13B-212ENST00000524330 L1TD1Q5T7N2 865 aaKnown RBP11.65□□□□□ -0.54
VPS13B-212ENST00000524330 CYB5R4Q7L1T6 521 aa11.65□□□□□ -0.54
VPS13B-212ENST00000524330 DEFB132Q7Z7B7 95 aa11.65□□□□□ -0.54
VPS13B-212ENST00000524330 CATIPQ7Z7H3 387 aa11.65□□□□□ -0.54
VPS13B-212ENST00000524330 ZNF444Q8N0Y2 327 aaPredicted RBP11.65□□□□□ -0.54
VPS13B-212ENST00000524330 IGDCC4Q8TDY8 1250 aa11.65□□□□□ -0.54
VPS13B-212ENST00000524330 ZNF396Q96N95 335 aaPredicted RBP11.65□□□□□ -0.54
VPS13B-212ENST00000524330 GPR101Q96P66 508 aaPredicted RBP11.65□□□□□ -0.54
VPS13B-212ENST00000524330 MRIQ9BWK5 157 aa11.65□□□□□ -0.54
VPS13B-212ENST00000524330 NBPF3Q9H094 633 aa11.65□□□□□ -0.54
VPS13B-212ENST00000524330 MKNK2Q9HBH9 465 aa11.65□□□□□ -0.54
VPS13B-212ENST00000524330 RBM28Q9NW13 759 aaKnown RBP11.65□□□□□ -0.54
VPS13B-212ENST00000524330 JAG2Q9Y219 1238 aa11.65□□□□□ -0.54
VPS13B-212ENST00000524330 GAKO14976 1311 aa11.64□□□□□ -0.55
VPS13B-212ENST00000524330 COL11A2P13942 1736 aaPredicted RBP11.64□□□□□ -0.55
VPS13B-212ENST00000524330 LTBP1Q14766 1721 aa11.64□□□□□ -0.55
VPS13B-212ENST00000524330 C10orf71Q711Q0 1435 aa11.64□□□□□ -0.55
VPS13B-212ENST00000524330 XBP1P17861 261 aa11.64□□□□□ -0.55
VPS13B-212ENST00000524330 IARSP41252 1262 aaKnown RBP11.64□□□□□ -0.55
VPS13B-212ENST00000524330 TGFB2P61812 414 aa11.64□□□□□ -0.55
VPS13B-212ENST00000524330 HDLBPQ00341 1268 aaKnown RBP11.64□□□□□ -0.55
VPS13B-212ENST00000524330 SSRP1Q08945 709 aaKnown RBP11.64□□□□□ -0.55
VPS13B-212ENST00000524330 ST3GAL1Q11201 340 aa11.64□□□□□ -0.55
VPS13B-212ENST00000524330 PPP4R3BQ5MIZ7 849 aa11.64□□□□□ -0.55
VPS13B-212ENST00000524330 IFIT1BQ5T764 474 aaKnown RBP11.64□□□□□ -0.55
VPS13B-212ENST00000524330 STRIP1Q5VSL9 837 aa11.64□□□□□ -0.55
VPS13B-212ENST00000524330 APOA5Q6Q788 366 aa11.64□□□□□ -0.55
VPS13B-212ENST00000524330 HHIPL2Q6UWX4 724 aa11.64□□□□□ -0.55
VPS13B-212ENST00000524330 TTC6Q86TZ1 520 aa11.64□□□□□ -0.55
VPS13B-212ENST00000524330 TMEM87AQ8NBN3 555 aa11.64□□□□□ -0.55
VPS13B-212ENST00000524330 TEKT1Q969V4 418 aa11.64□□□□□ -0.55
VPS13B-212ENST00000524330 DDX11Q96FC9 970 aa11.64□□□□□ -0.55
VPS13B-212ENST00000524330 ZSCAN10Q96SZ4 725 aaPredicted RBP11.64□□□□□ -0.55
VPS13B-212ENST00000524330 LY9Q9HBG7 655 aa11.64□□□□□ -0.55
VPS13B-212ENST00000524330 ORC3Q9UBD5 711 aaPredicted RBP11.64□□□□□ -0.55
VPS13B-212ENST00000524330 MYO3BQ8WXR4 1341 aa11.63□□□□□ -0.55
VPS13B-212ENST00000524330 STK36Q9NRP7 1315 aa11.63□□□□□ -0.55
VPS13B-212ENST00000524330 MYH2Q9UKX2 1941 aa11.63□□□□□ -0.55
VPS13B-212ENST00000524330 USP17L3A6NCW0 530 aa11.63□□□□□ -0.55
VPS13B-212ENST00000524330 USP17L4A6NCW7 530 aa11.63□□□□□ -0.55
VPS13B-212ENST00000524330 GOLGA6L4A6NEF3 574 aa11.63□□□□□ -0.55
VPS13B-212ENST00000524330 TSPY2A6NKD2 308 aa11.63□□□□□ -0.55
VPS13B-212ENST00000524330 DDAH1O94760 285 aa11.63□□□□□ -0.55
VPS13B-212ENST00000524330 RTN1Q16799 776 aa11.63□□□□□ -0.55
VPS13B-212ENST00000524330 DOK7Q18PE1 504 aa11.63□□□□□ -0.55
VPS13B-212ENST00000524330 C12orf60Q5U649 245 aa11.63□□□□□ -0.55
VPS13B-212ENST00000524330 USP17L1Q7RTZ2 530 aa11.63□□□□□ -0.55
VPS13B-212ENST00000524330 KLHL34Q8N239 644 aa11.63□□□□□ -0.55
VPS13B-212ENST00000524330 SH3RF3Q8TEJ3 882 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms