RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057		A0A0G2JLL6	359 aa	Predicted RBP	13.61	□□□□□ -0.23
SORBS3-222	ENST00000524057	MDM2	Q00987	491 aa	Predicted RBP	13.61	□□□□□ -0.23
SORBS3-222	ENST00000524057	TCP10	Q12799	353 aa		13.61	□□□□□ -0.23
SORBS3-222	ENST00000524057	TRIM32	Q13049	653 aa		13.61	□□□□□ -0.23
SORBS3-222	ENST00000524057	TAF7L	Q5H9L4	462 aa		13.61	□□□□□ -0.23
SORBS3-222	ENST00000524057	HHIPL2	Q6UWX4	724 aa		13.61	□□□□□ -0.23
SORBS3-222	ENST00000524057	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.61	□□□□□ -0.23
SORBS3-222	ENST00000524057	TBC1D22A	Q8WUA7	517 aa		13.61	□□□□□ -0.23
SORBS3-222	ENST00000524057	DNAAF4	Q8WXU2	420 aa		13.61	□□□□□ -0.23
SORBS3-222	ENST00000524057	HMX1	Q9NP08	348 aa	Predicted RBP	13.61	□□□□□ -0.23
SORBS3-222	ENST00000524057	OGDHL	Q9ULD0	1010 aa		13.61	□□□□□ -0.23
SORBS3-222	ENST00000524057	SLC45A1	Q9Y2W3	748 aa		13.61	□□□□□ -0.23
SORBS3-222	ENST00000524057	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.6	□□□□□ -0.23
SORBS3-222	ENST00000524057	GADL1	Q6ZQY3	521 aa		13.6	□□□□□ -0.23
SORBS3-222	ENST00000524057	ANKRD13C	Q8N6S4	541 aa		13.6	□□□□□ -0.23
SORBS3-222	ENST00000524057	CDX2	Q99626	313 aa	Predicted RBP	13.6	□□□□□ -0.23
SORBS3-222	ENST00000524057	PUS3	Q9BZE2	481 aa	Known RBP	13.6	□□□□□ -0.23
SORBS3-222	ENST00000524057	GJD2	Q9UKL4	321 aa		13.6	□□□□□ -0.23
SORBS3-222	ENST00000524057	AFG3L2	Q9Y4W6	797 aa		13.6	□□□□□ -0.23
SORBS3-222	ENST00000524057	PFAS	O15067	1338 aa		13.6	□□□□□ -0.23
SORBS3-222	ENST00000524057	PHF20L1	A8MW92	1017 aa		13.59	□□□□□ -0.23
SORBS3-222	ENST00000524057	FRAT2	O75474	233 aa	Predicted RBP	13.59	□□□□□ -0.23
SORBS3-222	ENST00000524057	HMGCR	P04035	888 aa		13.59	□□□□□ -0.23
SORBS3-222	ENST00000524057	FLII	Q13045	1269 aa		13.59	□□□□□ -0.23
SORBS3-222	ENST00000524057	VPS37D	Q86XT2	251 aa		13.59	□□□□□ -0.23
SORBS3-222	ENST00000524057	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.59	□□□□□ -0.23
SORBS3-222	ENST00000524057	PRUNE2	Q8WUY3	3088 aa		13.59	□□□□□ -0.23
SORBS3-222	ENST00000524057	COL6A1	P12109	1028 aa		13.58	□□□□□ -0.24
SORBS3-222	ENST00000524057	PTPRA	P18433	802 aa		13.58	□□□□□ -0.24
SORBS3-222	ENST00000524057	NFIA	Q12857	509 aa		13.58	□□□□□ -0.24
SORBS3-222	ENST00000524057	FKBP5	Q13451	457 aa	Predicted RBP	13.58	□□□□□ -0.24
SORBS3-222	ENST00000524057	ZFPM1	Q8IX07	1006 aa		13.58	□□□□□ -0.24
SORBS3-222	ENST00000524057	MAFA	Q8NHW3	353 aa	Predicted RBP	13.58	□□□□□ -0.24
SORBS3-222	ENST00000524057		E9PSI1	815 aa		13.57	□□□□□ -0.24
SORBS3-222	ENST00000524057	LRRC26	Q2I0M4	334 aa		13.57	□□□□□ -0.24
SORBS3-222	ENST00000524057	ZNF697	Q5TEC3	545 aa		13.57	□□□□□ -0.24
SORBS3-222	ENST00000524057	CDC42EP5	Q6NZY7	148 aa		13.57	□□□□□ -0.24
SORBS3-222	ENST00000524057	SCYL3	Q8IZE3	742 aa		13.57	□□□□□ -0.24
SORBS3-222	ENST00000524057	SYMPK	Q92797	1274 aa	Known RBP	13.57	□□□□□ -0.24
SORBS3-222	ENST00000524057	SEMA6B	Q9H3T3	888 aa		13.57	□□□□□ -0.24
SORBS3-222	ENST00000524057	FAM198A	Q9UFP1	575 aa		13.57	□□□□□ -0.24
SORBS3-222	ENST00000524057	RAPGEFL1	Q9UHV5	662 aa		13.57	□□□□□ -0.24
SORBS3-222	ENST00000524057	SUGT1	Q9Y2Z0	365 aa		13.57	□□□□□ -0.24
SORBS3-222	ENST00000524057	DOCK3	Q8IZD9	2030 aa		13.57	□□□□□ -0.24
SORBS3-222	ENST00000524057	MUC3A	Q02505	3323 aa		13.57	□□□□□ -0.24
SORBS3-222	ENST00000524057	FAM110C	Q1W6H9	321 aa		13.56	□□□□□ -0.24
SORBS3-222	ENST00000524057	CAVIN4	Q5BKX8	364 aa		13.56	□□□□□ -0.24
SORBS3-222	ENST00000524057	BEND3	Q5T5X7	828 aa		13.56	□□□□□ -0.24
SORBS3-222	ENST00000524057	PICK1	Q9NRD5	415 aa		13.56	□□□□□ -0.24
SORBS3-222	ENST00000524057	DDX60L	Q5H9U9	1706 aa	Known RBP	13.56	□□□□□ -0.24
SORBS3-222	ENST00000524057	COL2A1	P02458	1487 aa	Predicted RBP	13.55	□□□□□ -0.24
SORBS3-222	ENST00000524057	TREML2	Q5T2D2	321 aa		13.55	□□□□□ -0.24
SORBS3-222	ENST00000524057	MAP3K21	Q5TCX8	1036 aa		13.55	□□□□□ -0.24
SORBS3-222	ENST00000524057	MRPL50	Q8N5N7	158 aa	Known RBP	13.55	□□□□□ -0.24
SORBS3-222	ENST00000524057	SSH1	Q8WYL5	1049 aa		13.55	□□□□□ -0.24
SORBS3-222	ENST00000524057	MAST3	O60307	1309 aa		13.55	□□□□□ -0.24
SORBS3-222	ENST00000524057	TRIM75P	A6NK02	468 aa		13.54	□□□□□ -0.24
SORBS3-222	ENST00000524057		F6X3S4	739 aa		13.54	□□□□□ -0.24
SORBS3-222	ENST00000524057	SLURP2	P0DP57	97 aa		13.54	□□□□□ -0.24
SORBS3-222	ENST00000524057	MAP3K10	Q02779	954 aa		13.54	□□□□□ -0.24
SORBS3-222	ENST00000524057	TRIB2	Q92519	343 aa		13.54	□□□□□ -0.24
SORBS3-222	ENST00000524057	USP40	Q9NVE5	1235 aa		13.54	□□□□□ -0.24
SORBS3-222	ENST00000524057	AGTPBP1	Q9UPW5	1226 aa		13.54	□□□□□ -0.24
SORBS3-222	ENST00000524057	DAGLA	Q9Y4D2	1042 aa		13.54	□□□□□ -0.24
SORBS3-222	ENST00000524057	MROH5	Q6ZUA9	1318 aa		13.54	□□□□□ -0.24
SORBS3-222	ENST00000524057	DIXDC1	Q155Q3	683 aa		13.53	□□□□□ -0.24
SORBS3-222	ENST00000524057	LHX8	Q68G74	356 aa		13.53	□□□□□ -0.24
SORBS3-222	ENST00000524057	MYLIP	Q8WY64	445 aa		13.53	□□□□□ -0.24
SORBS3-222	ENST00000524057	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.53	□□□□□ -0.24
SORBS3-222	ENST00000524057	ATRNL1	Q5VV63	1379 aa		13.53	□□□□□ -0.24
SORBS3-222	ENST00000524057	TNFRSF10A	O00220	468 aa		13.52	□□□□□ -0.25
SORBS3-222	ENST00000524057	GRM8	O00222	908 aa		13.52	□□□□□ -0.25
SORBS3-222	ENST00000524057	PDE8B	O95263	885 aa		13.52	□□□□□ -0.25
SORBS3-222	ENST00000524057	PRKAR2A	P13861	404 aa	Known RBP	13.52	□□□□□ -0.25
SORBS3-222	ENST00000524057	CYP2B6	P20813	491 aa		13.52	□□□□□ -0.25
SORBS3-222	ENST00000524057	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
SORBS3-222	ENST00000524057	LRRC24	Q50LG9	513 aa		13.52	□□□□□ -0.25
SORBS3-222	ENST00000524057	CCDC84	Q86UT8	332 aa	Predicted RBP	13.52	□□□□□ -0.25
SORBS3-222	ENST00000524057	KAZALD1	Q96I82	304 aa		13.52	□□□□□ -0.25
SORBS3-222	ENST00000524057	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.52	□□□□□ -0.25
SORBS3-222	ENST00000524057	LRRFIP2	Q9Y608	721 aa	Known RBP	13.52	□□□□□ -0.25
SORBS3-222	ENST00000524057	TTC28	Q96AY4	2481 aa		13.52	□□□□□ -0.25
SORBS3-222	ENST00000524057	CDH23	Q9H251	3354 aa		13.52	□□□□□ -0.25
SORBS3-222	ENST00000524057	CTNND1	O60716	968 aa	Known RBP	13.51	□□□□□ -0.25
SORBS3-222	ENST00000524057	GCLC	P48506	637 aa	Predicted RBP	13.51	□□□□□ -0.25
SORBS3-222	ENST00000524057	CACNB2	Q08289	660 aa	Predicted RBP	13.51	□□□□□ -0.25
SORBS3-222	ENST00000524057	SHH	Q15465	462 aa		13.51	□□□□□ -0.25
SORBS3-222	ENST00000524057	SH3BP5L	Q7L8J4	393 aa		13.51	□□□□□ -0.25
SORBS3-222	ENST00000524057	VGLL2	Q8N8G2	317 aa		13.51	□□□□□ -0.25
SORBS3-222	ENST00000524057	TTYH1	Q9H313	450 aa	Predicted RBP	13.51	□□□□□ -0.25
SORBS3-222	ENST00000524057	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.51	□□□□□ -0.25
SORBS3-222	ENST00000524057	PNMA3	Q9UL41	463 aa		13.51	□□□□□ -0.25
SORBS3-222	ENST00000524057	AK9	Q5TCS8	1911 aa		13.51	□□□□□ -0.25
SORBS3-222	ENST00000524057	DNAH12	Q6ZR08	3092 aa		13.5	□□□□□ -0.25
SORBS3-222	ENST00000524057	METTL24	Q5JXM2	366 aa		13.5	□□□□□ -0.25
SORBS3-222	ENST00000524057	WDR66	Q8TBY9	1149 aa		13.5	□□□□□ -0.25
SORBS3-222	ENST00000524057	ENTPD3	O75355	529 aa		13.49	□□□□□ -0.25
SORBS3-222	ENST00000524057	XRCC5	P13010	732 aa	Known RBP	13.49	□□□□□ -0.25
SORBS3-222	ENST00000524057	CCND3	P30281	292 aa	Predicted RBP	13.49	□□□□□ -0.25
SORBS3-222	ENST00000524057	PLA2G5	P39877	138 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms