RNA–Protein interactions for RNA: ENST00000523985.5

CCNC-217, Transcript of cyclin C, humanhuman

TSL 2 BASIC

Gene CCNC, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-217ENST00000523985 UBE3CQ15386 1083 aa17.51■□□□□ 0.39
CCNC-217ENST00000523985 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.51■□□□□ 0.39
CCNC-217ENST00000523985 CSRNP1Q96S65 589 aa17.51■□□□□ 0.39
CCNC-217ENST00000523985 STAP2Q9UGK3 403 aa17.51■□□□□ 0.39
CCNC-217ENST00000523985 RFX7Q2KHR2 1363 aa17.51■□□□□ 0.39
CCNC-217ENST00000523985 ATRNL1Q5VV63 1379 aa17.51■□□□□ 0.39
CCNC-217ENST00000523985 COL2A1P02458 1487 aaPredicted RBP17.5■□□□□ 0.39
CCNC-217ENST00000523985 AOC2O75106 756 aa17.5■□□□□ 0.39
CCNC-217ENST00000523985 ZFYP08048 801 aaPredicted RBP17.5■□□□□ 0.39
CCNC-217ENST00000523985 PDE6AP16499 860 aa17.5■□□□□ 0.39
CCNC-217ENST00000523985 MX1P20591 662 aa17.5■□□□□ 0.39
CCNC-217ENST00000523985 TM4SF4P48230 202 aa17.5■□□□□ 0.39
CCNC-217ENST00000523985 SREBF2Q12772 1141 aa17.5■□□□□ 0.39
CCNC-217ENST00000523985 SPRYD7Q5W111 196 aa17.5■□□□□ 0.39
CCNC-217ENST00000523985 FOXP4Q8IVH2 680 aaPredicted RBP17.5■□□□□ 0.39
CCNC-217ENST00000523985 ZSCAN29Q8IWY8 852 aaPredicted RBP17.5■□□□□ 0.39
CCNC-217ENST00000523985 OSBPL5Q9H0X9 879 aaPredicted RBP17.5■□□□□ 0.39
CCNC-217ENST00000523985 PI4KBQ9UBF8 816 aa17.5■□□□□ 0.39
CCNC-217ENST00000523985 TAOK2Q9UL54 1235 aa17.5■□□□□ 0.39
CCNC-217ENST00000523985 NDUFB9Q9Y6M9 179 aa17.5■□□□□ 0.39
CCNC-217ENST00000523985 AKAP11Q9UKA4 1901 aa17.5■□□□□ 0.39
CCNC-217ENST00000523985 SSC5DA1L4H1 1573 aa17.49■□□□□ 0.39
CCNC-217ENST00000523985 MAGEB6P1A0A0J9YX57 407 aa17.49■□□□□ 0.39
CCNC-217ENST00000523985 MANSC4A6NHS7 340 aaPredicted RBP17.49■□□□□ 0.39
CCNC-217ENST00000523985 HSPA1AP0DMV8 641 aaKnown RBP17.49■□□□□ 0.39
CCNC-217ENST00000523985 HSPA1BP0DMV9 641 aaKnown RBP17.49■□□□□ 0.39
CCNC-217ENST00000523985 PICALMQ13492 652 aa17.49■□□□□ 0.39
CCNC-217ENST00000523985 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.49■□□□□ 0.39
CCNC-217ENST00000523985 ADGRA1Q86SQ6 560 aa17.49■□□□□ 0.39
CCNC-217ENST00000523985 KBTBD3Q8NAB2 608 aa17.49■□□□□ 0.39
CCNC-217ENST00000523985 SH3RF3Q8TEJ3 882 aaPredicted RBP17.49■□□□□ 0.39
CCNC-217ENST00000523985 DDX4Q9NQI0 724 aaKnown RBP17.49■□□□□ 0.39
CCNC-217ENST00000523985 SAGE1Q9NXZ1 904 aa17.49■□□□□ 0.39
CCNC-217ENST00000523985 HERC5Q9UII4 1024 aaKnown RBP17.49■□□□□ 0.39
CCNC-217ENST00000523985 IGHDP01880 384 aa17.48■□□□□ 0.39
CCNC-217ENST00000523985 ADD2P35612 726 aa17.48■□□□□ 0.39
CCNC-217ENST00000523985 CTCFP49711 727 aaPredicted RBP17.48■□□□□ 0.39
CCNC-217ENST00000523985 NUCB1Q02818 461 aa17.48■□□□□ 0.39
CCNC-217ENST00000523985 ERO1BQ86YB8 467 aa17.48■□□□□ 0.39
CCNC-217ENST00000523985 ZFPM1Q8IX07 1006 aa17.48■□□□□ 0.39
CCNC-217ENST00000523985 WRNIP1Q96S55 665 aa17.48■□□□□ 0.39
CCNC-217ENST00000523985 CRNKL1Q9BZJ0 848 aaKnown RBP17.48■□□□□ 0.39
CCNC-217ENST00000523985 ZNF532Q9HCE3 1301 aa17.47■□□□□ 0.39
CCNC-217ENST00000523985 TCRBV5S4A2TA0A5A2 114 aa17.47■□□□□ 0.39
CCNC-217ENST00000523985 DDTLA6NHG4 134 aaPredicted RBP17.47■□□□□ 0.39
CCNC-217ENST00000523985 CTNND1O60716 968 aaKnown RBP17.47■□□□□ 0.39
CCNC-217ENST00000523985 ALDH1A1P00352 501 aa17.47■□□□□ 0.39
CCNC-217ENST00000523985 NOL9Q5SY16 702 aaKnown RBP17.47■□□□□ 0.39
CCNC-217ENST00000523985 MIGA2Q7L4E1 593 aa17.47■□□□□ 0.39
CCNC-217ENST00000523985 SH3BP5LQ7L8J4 393 aa17.47■□□□□ 0.39
CCNC-217ENST00000523985 METTL16Q86W50 562 aaKnown RBP17.47■□□□□ 0.39
CCNC-217ENST00000523985 CHD1LQ86WJ1 897 aa17.47■□□□□ 0.39
CCNC-217ENST00000523985 CDAN1Q8IWY9 1227 aa17.47■□□□□ 0.39
CCNC-217ENST00000523985 TGFBRAP1Q8WUH2 860 aa17.47■□□□□ 0.39
CCNC-217ENST00000523985 WNK4Q96J92 1243 aa17.47■□□□□ 0.39
CCNC-217ENST00000523985 RIOK1Q9BRS2 568 aaKnown RBP17.47■□□□□ 0.39
CCNC-217ENST00000523985 MYH2Q9UKX2 1941 aa17.47■□□□□ 0.39
CCNC-217ENST00000523985 SALL3Q9BXA9 1300 aa17.47■□□□□ 0.39
CCNC-217ENST00000523985 HLA-DOAP06340 250 aa17.46■□□□□ 0.39
CCNC-217ENST00000523985 USP5P45974 858 aa17.46■□□□□ 0.39
CCNC-217ENST00000523985 PPATQ06203 517 aa17.46■□□□□ 0.39
CCNC-217ENST00000523985 VGLL4Q14135 290 aa17.46■□□□□ 0.39
CCNC-217ENST00000523985 OTUD7BQ6GQQ9 843 aa17.46■□□□□ 0.39
CCNC-217ENST00000523985 TTC6Q86TZ1 520 aa17.46■□□□□ 0.39
CCNC-217ENST00000523985 PI4K2BQ8TCG2 481 aa17.46■□□□□ 0.39
CCNC-217ENST00000523985 CLMNQ96JQ2 1002 aa17.46■□□□□ 0.39
CCNC-217ENST00000523985 GINM1Q9NU53 330 aa17.46■□□□□ 0.39
CCNC-217ENST00000523985 SPDYE5A6NIY4 337 aa17.45■□□□□ 0.38
CCNC-217ENST00000523985 GTF2A2P52657 109 aa17.45■□□□□ 0.38
CCNC-217ENST00000523985 PDE1AP54750 535 aa17.45■□□□□ 0.38
CCNC-217ENST00000523985 DYNLL1P63167 89 aaKnown RBP17.45■□□□□ 0.38
CCNC-217ENST00000523985 MIGA1Q8NAN2 632 aa17.45■□□□□ 0.38
CCNC-217ENST00000523985 TBC1D2Q9BYX2 928 aa17.45■□□□□ 0.38
CCNC-217ENST00000523985 OSBPL3Q9H4L5 887 aa17.45■□□□□ 0.38
CCNC-217ENST00000523985 PRDM10Q9NQV6 1147 aa17.45■□□□□ 0.38
CCNC-217ENST00000523985 ATP8A2Q9NTI2 1148 aa17.45■□□□□ 0.38
CCNC-217ENST00000523985 FZD1Q9UP38 647 aa17.45■□□□□ 0.38
CCNC-217ENST00000523985 FLT1P17948 1338 aa17.45■□□□□ 0.38
CCNC-217ENST00000523985 TESPA1A2RU30 521 aaPredicted RBP17.44■□□□□ 0.38
CCNC-217ENST00000523985 PHF20L1A8MW92 1017 aa17.44■□□□□ 0.38
CCNC-217ENST00000523985 PPP4R3CPQ6ZMV5 832 aa17.44■□□□□ 0.38
CCNC-217ENST00000523985 OPTNQ96CV9 577 aa17.44■□□□□ 0.38
CCNC-217ENST00000523985 EDC3Q96F86 508 aaKnown RBP17.44■□□□□ 0.38
CCNC-217ENST00000523985 ELP3Q9H9T3 547 aa17.44■□□□□ 0.38
CCNC-217ENST00000523985 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.44■□□□□ 0.382e-6■■■■■ 41.3
CCNC-217ENST00000523985 THSD7BQ9C0I4 1608 aa17.43■□□□□ 0.38
CCNC-217ENST00000523985 RNF113AO15541 343 aaKnown RBP17.43■□□□□ 0.38
CCNC-217ENST00000523985 PPIL2Q13356 520 aa17.43■□□□□ 0.38
CCNC-217ENST00000523985 MAPKAPK5Q8IW41 473 aa17.43■□□□□ 0.38
CCNC-217ENST00000523985 ZKSCAN4Q969J2 545 aaPredicted RBP17.43■□□□□ 0.38
CCNC-217ENST00000523985 EVI5LQ96CN4 794 aa17.43■□□□□ 0.38
CCNC-217ENST00000523985 DDRGK1Q96HY6 314 aa17.43■□□□□ 0.38
CCNC-217ENST00000523985 ZIC5Q96T25 663 aa17.43■□□□□ 0.38
CCNC-217ENST00000523985 CFHR5Q9BXR6 569 aa17.43■□□□□ 0.38
CCNC-217ENST00000523985 TRIM34Q9BYJ4 488 aa17.43■□□□□ 0.38
CCNC-217ENST00000523985 EHD4Q9H223 541 aa17.43■□□□□ 0.38
CCNC-217ENST00000523985 PICK1Q9NRD5 415 aa17.43■□□□□ 0.38
CCNC-217ENST00000523985 RNF186Q9NXI6 227 aa17.43■□□□□ 0.38
CCNC-217ENST00000523985 SNCAIPQ9Y6H5 919 aa17.43■□□□□ 0.38
CCNC-217ENST00000523985 CXCL11O14625 94 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms