RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 PICK1Q9NRD5 415 aa11.74□□□□□ -0.53
PTPN12-216ENST00000523952 LOC285556D6RIA3 1793 aa11.73□□□□□ -0.53
PTPN12-216ENST00000523952 F6X3S4 739 aa11.73□□□□□ -0.53
PTPN12-216ENST00000523952 CXCL11O14625 94 aa11.73□□□□□ -0.53
PTPN12-216ENST00000523952 GRIK5Q16478 980 aa11.73□□□□□ -0.53
PTPN12-216ENST00000523952 METTL24Q5JXM2 366 aa11.73□□□□□ -0.53
PTPN12-216ENST00000523952 FAM151AQ8WW52 585 aa11.73□□□□□ -0.53
PTPN12-216ENST00000523952 SUGT1Q9Y2Z0 365 aa11.73□□□□□ -0.53
PTPN12-216ENST00000523952 PLXNB2O15031 1838 aa11.72□□□□□ -0.53
PTPN12-216ENST00000523952 SYN1P17600 705 aa11.72□□□□□ -0.53
PTPN12-216ENST00000523952 IRF5Q13568 498 aa11.72□□□□□ -0.53
PTPN12-216ENST00000523952 EPHA10Q5JZY3 1008 aa11.72□□□□□ -0.53
PTPN12-216ENST00000523952 HHIPL2Q6UWX4 724 aa11.72□□□□□ -0.53
PTPN12-216ENST00000523952 TDHQ8IZJ6 230 aa11.72□□□□□ -0.53
PTPN12-216ENST00000523952 ANKLE1Q8NAG6 615 aa11.72□□□□□ -0.53
PTPN12-216ENST00000523952 GDF15Q99988 308 aa11.72□□□□□ -0.53
PTPN12-216ENST00000523952 MRIQ9BWK5 157 aa11.72□□□□□ -0.53
PTPN12-216ENST00000523952 UBE2OQ9C0C9 1292 aaKnown RBP11.72□□□□□ -0.53
PTPN12-216ENST00000523952 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.72□□□□□ -0.532e-7■■■■■ 29.7
PTPN12-216ENST00000523952 LAMA3Q16787 3333 aa11.72□□□□□ -0.53
PTPN12-216ENST00000523952 UNC80Q8N2C7 3258 aa11.72□□□□□ -0.53
PTPN12-216ENST00000523952 PRR29P0C7W0 189 aa11.71□□□□□ -0.53
PTPN12-216ENST00000523952 NOL9Q5SY16 702 aaKnown RBP11.71□□□□□ -0.53
PTPN12-216ENST00000523952 BEND3Q5T5X7 828 aa11.71□□□□□ -0.53
PTPN12-216ENST00000523952 APOBEC3HQ6NTF7 200 aaKnown RBP11.71□□□□□ -0.53
PTPN12-216ENST00000523952 SLC4A10Q6U841 1118 aa11.71□□□□□ -0.53
PTPN12-216ENST00000523952 FBXO33Q7Z6M2 555 aa11.71□□□□□ -0.53
PTPN12-216ENST00000523952 DIS3LQ8TF46 1054 aaKnown RBP11.71□□□□□ -0.53
PTPN12-216ENST00000523952 COL25A1Q9BXS0 654 aaPredicted RBP11.71□□□□□ -0.53
PTPN12-216ENST00000523952 PUS3Q9BZE2 481 aaKnown RBP11.71□□□□□ -0.53
PTPN12-216ENST00000523952 NBPF3Q9H094 633 aa11.71□□□□□ -0.53
PTPN12-216ENST00000523952 PAK6Q9NQU5 681 aaPredicted RBP11.71□□□□□ -0.53
PTPN12-216ENST00000523952 ZNF112Q9UJU3 913 aa11.71□□□□□ -0.53
PTPN12-216ENST00000523952 LRRFIP2Q9Y608 721 aaKnown RBP11.71□□□□□ -0.53
PTPN12-216ENST00000523952 ZHX2Q9Y6X8 837 aa11.71□□□□□ -0.53
PTPN12-216ENST00000523952 CDK5RAP2Q96SN8 1893 aa11.71□□□□□ -0.53
PTPN12-216ENST00000523952 IFIT1P09914 478 aaKnown RBP11.7□□□□□ -0.54
PTPN12-216ENST00000523952 MAGEA10P43363 369 aaPredicted RBP11.7□□□□□ -0.54
PTPN12-216ENST00000523952 LRIT3Q3SXY7 679 aa11.7□□□□□ -0.54
PTPN12-216ENST00000523952 GPAT2Q6NUI2 795 aa11.7□□□□□ -0.54
PTPN12-216ENST00000523952 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.7□□□□□ -0.54
PTPN12-216ENST00000523952 ZSCAN29Q8IWY8 852 aaPredicted RBP11.7□□□□□ -0.54
PTPN12-216ENST00000523952 WDR66Q8TBY9 1149 aa11.7□□□□□ -0.54
PTPN12-216ENST00000523952 CRISPLD2Q9H0B8 497 aa11.7□□□□□ -0.54
PTPN12-216ENST00000523952 HMX1Q9NP08 348 aaPredicted RBP11.7□□□□□ -0.54
PTPN12-216ENST00000523952 MTMR10Q9NXD2 777 aa11.7□□□□□ -0.54
PTPN12-216ENST00000523952 PNMA3Q9UL41 463 aa11.7□□□□□ -0.54
PTPN12-216ENST00000523952 A0A0G2JLL6 359 aaPredicted RBP11.69□□□□□ -0.54
PTPN12-216ENST00000523952 HMGCRP04035 888 aa11.69□□□□□ -0.54
PTPN12-216ENST00000523952 CD44P16070 742 aaKnown RBP11.69□□□□□ -0.54
PTPN12-216ENST00000523952 MOGSQ13724 837 aa11.69□□□□□ -0.54
PTPN12-216ENST00000523952 PRRT2Q7Z6L0 340 aaPredicted RBP11.69□□□□□ -0.54
PTPN12-216ENST00000523952 SCYL3Q8IZE3 742 aa11.69□□□□□ -0.54
PTPN12-216ENST00000523952 ANKRD13CQ8N6S4 541 aa11.69□□□□□ -0.54
PTPN12-216ENST00000523952 SRCIN1Q9C0H9 1055 aa11.69□□□□□ -0.54
PTPN12-216ENST00000523952 C11orf49Q9H6J7 331 aa11.69□□□□□ -0.54
PTPN12-216ENST00000523952 SLC45A1Q9Y2W3 748 aa11.69□□□□□ -0.54
PTPN12-216ENST00000523952 MAST2Q6P0Q8 1798 aa11.69□□□□□ -0.54
PTPN12-216ENST00000523952 TRIM75PA6NK02 468 aa11.68□□□□□ -0.54
PTPN12-216ENST00000523952 ALDH1L1O75891 902 aa11.68□□□□□ -0.54
PTPN12-216ENST00000523952 PDE8BO95263 885 aa11.68□□□□□ -0.54
PTPN12-216ENST00000523952 CDC42EP5Q6NZY7 148 aa11.68□□□□□ -0.54
PTPN12-216ENST00000523952 WWC1Q8IX03 1113 aa11.68□□□□□ -0.54
PTPN12-216ENST00000523952 USP40Q9NVE5 1235 aa11.68□□□□□ -0.54
PTPN12-216ENST00000523952 IL16Q14005 1332 aa11.67□□□□□ -0.54
PTPN12-216ENST00000523952 RPTORQ8N122 1335 aa11.67□□□□□ -0.54
PTPN12-216ENST00000523952 LDHBP07195 334 aaKnown RBP11.67□□□□□ -0.54
PTPN12-216ENST00000523952 SLC5A1P13866 664 aa11.67□□□□□ -0.54
PTPN12-216ENST00000523952 PUM3Q15397 648 aaKnown RBP11.67□□□□□ -0.54
PTPN12-216ENST00000523952 LRRC24Q50LG9 513 aa11.67□□□□□ -0.54
PTPN12-216ENST00000523952 SUCLG2Q96I99 432 aa11.67□□□□□ -0.54
PTPN12-216ENST00000523952 DAGLAQ9Y4D2 1042 aa11.67□□□□□ -0.54
PTPN12-216ENST00000523952 FANCIQ9NVI1 1328 aa11.66□□□□□ -0.54
PTPN12-216ENST00000523952 PTPRAP18433 802 aa11.66□□□□□ -0.54
PTPN12-216ENST00000523952 NFIAQ12857 509 aa11.66□□□□□ -0.54
PTPN12-216ENST00000523952 PABPC4Q13310 644 aaKnown RBP eCLIP11.66□□□□□ -0.54
PTPN12-216ENST00000523952 DIXDC1Q155Q3 683 aa11.66□□□□□ -0.54
PTPN12-216ENST00000523952 FAM110CQ1W6H9 321 aa11.66□□□□□ -0.54
PTPN12-216ENST00000523952 CCDC27Q2M243 656 aa11.66□□□□□ -0.54
PTPN12-216ENST00000523952 PRKRIP1Q9H875 184 aaPredicted RBP11.66□□□□□ -0.54
PTPN12-216ENST00000523952 GNL3LQ9NVN8 582 aaKnown RBP11.66□□□□□ -0.54
PTPN12-216ENST00000523952 AGTPBP1Q9UPW5 1226 aa11.66□□□□□ -0.54
PTPN12-216ENST00000523952 AFG3L2Q9Y4W6 797 aa11.66□□□□□ -0.54
PTPN12-216ENST00000523952 LTBP2Q14767 1821 aa11.65□□□□□ -0.54
PTPN12-216ENST00000523952 VAMP4O75379 141 aa11.65□□□□□ -0.54
PTPN12-216ENST00000523952 GCLCP48506 637 aaPredicted RBP11.65□□□□□ -0.54
PTPN12-216ENST00000523952 RGS3P49796 1198 aa11.65□□□□□ -0.54
PTPN12-216ENST00000523952 EXOSC9Q06265 439 aaKnown RBP11.65□□□□□ -0.54
PTPN12-216ENST00000523952 FAM161BQ96MY7 647 aa11.65□□□□□ -0.54
PTPN12-216ENST00000523952 LBHD1Q9BQE6 289 aaPredicted RBP11.65□□□□□ -0.54
PTPN12-216ENST00000523952 BICC1Q9H694 974 aaKnown RBP11.65□□□□□ -0.54
PTPN12-216ENST00000523952 FAM198AQ9UFP1 575 aa11.65□□□□□ -0.54
PTPN12-216ENST00000523952 KIF16BQ96L93 1317 aa11.64□□□□□ -0.55
PTPN12-216ENST00000523952 CTNND1O60716 968 aaKnown RBP11.64□□□□□ -0.55
PTPN12-216ENST00000523952 MDM2Q00987 491 aaPredicted RBP11.64□□□□□ -0.55
PTPN12-216ENST00000523952 ZNF697Q5TEC3 545 aa11.64□□□□□ -0.55
PTPN12-216ENST00000523952 CCAR1Q8IX12 1150 aaKnown RBP11.64□□□□□ -0.55
PTPN12-216ENST00000523952 PHF20L1A8MW92 1017 aa11.63□□□□□ -0.55
PTPN12-216ENST00000523952 ENTPD3O75355 529 aa11.63□□□□□ -0.55
PTPN12-216ENST00000523952 NBPF7P0C2Y1 421 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms