RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 PICALMQ13492 652 aa10.89□□□□□ -0.67
CTNNA1-240ENST00000523912 CCDC158Q5M9N0 1113 aa10.89□□□□□ -0.67
CTNNA1-240ENST00000523912 TTC39AQ5SRH9 613 aa10.89□□□□□ -0.67
CTNNA1-240ENST00000523912 FAM43AQ8N2R8 423 aa10.89□□□□□ -0.67
CTNNA1-240ENST00000523912 ZNF333Q96JL9 665 aa10.89□□□□□ -0.67
CTNNA1-240ENST00000523912 GPR108Q9NPR9 543 aa10.89□□□□□ -0.67
CTNNA1-240ENST00000523912 HMG20BQ9P0W2 317 aa10.89□□□□□ -0.67
CTNNA1-240ENST00000523912 LRP2BPQ9P2M1 347 aa10.89□□□□□ -0.67
CTNNA1-240ENST00000523912 ZNF112Q9UJU3 913 aa10.89□□□□□ -0.67
CTNNA1-240ENST00000523912 TNNQ9UQP3 1299 aa10.89□□□□□ -0.67
CTNNA1-240ENST00000523912 RFX7Q2KHR2 1363 aa10.89□□□□□ -0.67
CTNNA1-240ENST00000523912 GPR75-ASB3A0A0A6YYF3 556 aa10.88□□□□□ -0.67
CTNNA1-240ENST00000523912 BTBD19C9JJ37 291 aa10.88□□□□□ -0.67
CTNNA1-240ENST00000523912 SURF6O75683 361 aaKnown RBP10.88□□□□□ -0.67
CTNNA1-240ENST00000523912 ATP8B2P98198 1209 aa10.88□□□□□ -0.67
CTNNA1-240ENST00000523912 POLA2Q14181 598 aa10.88□□□□□ -0.67
CTNNA1-240ENST00000523912 TNNI3KQ59H18 835 aa10.88□□□□□ -0.67
CTNNA1-240ENST00000523912 ANKRD23Q86SG2 305 aa10.88□□□□□ -0.67
CTNNA1-240ENST00000523912 SCYL3Q8IZE3 742 aa10.88□□□□□ -0.67
CTNNA1-240ENST00000523912 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.88□□□□□ -0.67
CTNNA1-240ENST00000523912 SSH3Q8TE77 659 aa10.88□□□□□ -0.67
CTNNA1-240ENST00000523912 PARK7Q99497 189 aaKnown RBP10.88□□□□□ -0.67
CTNNA1-240ENST00000523912 KCNH4Q9UQ05 1017 aa10.88□□□□□ -0.67
CTNNA1-240ENST00000523912 FPGT-TNNI3KV9GXZ4 949 aa10.88□□□□□ -0.67
CTNNA1-240ENST00000523912 CXCL11O14625 94 aa10.87□□□□□ -0.67
CTNNA1-240ENST00000523912 TLR2O60603 784 aa10.87□□□□□ -0.67
CTNNA1-240ENST00000523912 IGSF3O75054 1194 aa10.87□□□□□ -0.67
CTNNA1-240ENST00000523912 NPM3O75607 178 aaKnown RBP10.87□□□□□ -0.67
CTNNA1-240ENST00000523912 BAG3O95817 575 aa10.87□□□□□ -0.67
CTNNA1-240ENST00000523912 PLCG2P16885 1265 aa10.87□□□□□ -0.67
CTNNA1-240ENST00000523912 EN2P19622 333 aaPredicted RBP10.87□□□□□ -0.67
CTNNA1-240ENST00000523912 ERC1Q8IUD2 1116 aa10.87□□□□□ -0.67
CTNNA1-240ENST00000523912 C1orf115Q9H7X2 142 aa10.87□□□□□ -0.67
CTNNA1-240ENST00000523912 PDHXO00330 501 aa10.86□□□□□ -0.67
CTNNA1-240ENST00000523912 MCAMP43121 646 aa10.86□□□□□ -0.67
CTNNA1-240ENST00000523912 SLC9C1Q4G0N8 1177 aa10.86□□□□□ -0.67
CTNNA1-240ENST00000523912 NAA16Q6N069 864 aaPredicted RBP10.86□□□□□ -0.67
CTNNA1-240ENST00000523912 PI16Q6UXB8 463 aa10.86□□□□□ -0.67
CTNNA1-240ENST00000523912 FASTKD5Q7L8L6 764 aaKnown RBP10.86□□□□□ -0.67
CTNNA1-240ENST00000523912 ZFPM1Q8IX07 1006 aa10.86□□□□□ -0.67
CTNNA1-240ENST00000523912 TEX11Q8IYF3 940 aa10.86□□□□□ -0.67
CTNNA1-240ENST00000523912 NSUN4Q96CB9 384 aaKnown RBP10.86□□□□□ -0.67
CTNNA1-240ENST00000523912 ATRNL1Q5VV63 1379 aa10.86□□□□□ -0.67
CTNNA1-240ENST00000523912 CTNND1O60716 968 aaKnown RBP10.85□□□□□ -0.67
CTNNA1-240ENST00000523912 LACTBP83111 547 aaPredicted RBP10.85□□□□□ -0.67
CTNNA1-240ENST00000523912 HSP90AB4PQ58FF6 505 aa10.85□□□□□ -0.67
CTNNA1-240ENST00000523912 TBC1D9Q6ZT07 1266 aa10.85□□□□□ -0.67
CTNNA1-240ENST00000523912 DBNDD2Q9BQY9 259 aa10.85□□□□□ -0.67
CTNNA1-240ENST00000523912 TRIM34Q9BYJ4 488 aa10.85□□□□□ -0.67
CTNNA1-240ENST00000523912 CHMP4BQ9H444 224 aaKnown RBP10.85□□□□□ -0.67
CTNNA1-240ENST00000523912 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.85□□□□□ -0.672e-13■■■□□ 15
CTNNA1-240ENST00000523912 DDX4Q9NQI0 724 aaKnown RBP10.85□□□□□ -0.67
CTNNA1-240ENST00000523912 NOP58Q9Y2X3 529 aaKnown RBP10.85□□□□□ -0.67
CTNNA1-240ENST00000523912 PTCH2Q9Y6C5 1203 aa10.85□□□□□ -0.67
CTNNA1-240ENST00000523912 ZHX2Q9Y6X8 837 aa10.85□□□□□ -0.67
CTNNA1-240ENST00000523912 COL2A1P02458 1487 aaPredicted RBP10.85□□□□□ -0.67
CTNNA1-240ENST00000523912 PHF20L1A8MW92 1017 aa10.84□□□□□ -0.67
CTNNA1-240ENST00000523912 ZBTB7BO15156 539 aaPredicted RBP10.84□□□□□ -0.67
CTNNA1-240ENST00000523912 TBC1D12O60347 775 aa10.84□□□□□ -0.67
CTNNA1-240ENST00000523912 RLBP1P12271 317 aa10.84□□□□□ -0.67
CTNNA1-240ENST00000523912 CAPN2P17655 700 aa10.84□□□□□ -0.67
CTNNA1-240ENST00000523912 PTPRAP18433 802 aa10.84□□□□□ -0.67
CTNNA1-240ENST00000523912 HOXD10P28358 340 aa10.84□□□□□ -0.67
CTNNA1-240ENST00000523912 FXR1P51114 621 aaKnown RBP eCLIP10.84□□□□□ -0.672e-6■■■□□ 17.9
CTNNA1-240ENST00000523912 RHBDL3P58872 404 aa10.84□□□□□ -0.67
CTNNA1-240ENST00000523912 CAP1Q01518 475 aa10.84□□□□□ -0.67
CTNNA1-240ENST00000523912 CEP85Q6P2H3 762 aa10.84□□□□□ -0.67
CTNNA1-240ENST00000523912 CERS3Q8IU89 383 aa10.84□□□□□ -0.67
CTNNA1-240ENST00000523912 ZNF512BQ96KM6 892 aaPredicted RBP10.84□□□□□ -0.67
CTNNA1-240ENST00000523912 TBC1D2Q9BYX2 928 aa10.84□□□□□ -0.67
CTNNA1-240ENST00000523912 OSBPL5Q9H0X9 879 aaPredicted RBP10.84□□□□□ -0.67
CTNNA1-240ENST00000523912 SNRKQ9NRH2 765 aa10.84□□□□□ -0.67
CTNNA1-240ENST00000523912 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.84□□□□□ -0.67
CTNNA1-240ENST00000523912 HTTP42858 3142 aa10.84□□□□□ -0.67
CTNNA1-240ENST00000523912 A0A0G2JLL6 359 aaPredicted RBP10.83□□□□□ -0.68
CTNNA1-240ENST00000523912 DDTLA6NHG4 134 aaPredicted RBP10.83□□□□□ -0.68
CTNNA1-240ENST00000523912 HMMRO75330 724 aa10.83□□□□□ -0.68
CTNNA1-240ENST00000523912 MAP3K10Q02779 954 aa10.83□□□□□ -0.68
CTNNA1-240ENST00000523912 SLC4A8Q2Y0W8 1093 aa10.83□□□□□ -0.68
CTNNA1-240ENST00000523912 TMED8Q6PL24 325 aaPredicted RBP10.83□□□□□ -0.68
CTNNA1-240ENST00000523912 GADL1Q6ZQY3 521 aa10.83□□□□□ -0.68
CTNNA1-240ENST00000523912 SH3BP5LQ7L8J4 393 aa10.83□□□□□ -0.68
CTNNA1-240ENST00000523912 PRRT2Q7Z6L0 340 aaPredicted RBP10.83□□□□□ -0.68
CTNNA1-240ENST00000523912 NKX2-3Q8TAU0 364 aa10.83□□□□□ -0.68
CTNNA1-240ENST00000523912 SMCR8Q8TEV9 937 aaPredicted RBP10.83□□□□□ -0.68
CTNNA1-240ENST00000523912 DHX36Q9H2U1 1008 aaKnown RBP10.83□□□□□ -0.68
CTNNA1-240ENST00000523912 AATFQ9NY61 560 aaKnown RBP eCLIP10.83□□□□□ -0.68
CTNNA1-240ENST00000523912 CPA4Q9UI42 421 aa10.83□□□□□ -0.68
CTNNA1-240ENST00000523912 HERC5Q9UII4 1024 aaKnown RBP10.83□□□□□ -0.68
CTNNA1-240ENST00000523912 PNMA3Q9UL41 463 aa10.83□□□□□ -0.68
CTNNA1-240ENST00000523912 SLC45A1Q9Y2W3 748 aa10.83□□□□□ -0.68
CTNNA1-240ENST00000523912 AK9Q5TCS8 1911 aa10.83□□□□□ -0.68
CTNNA1-240ENST00000523912 CEP290O15078 2479 aa10.82□□□□□ -0.68
CTNNA1-240ENST00000523912 MYH2Q9UKX2 1941 aa10.82□□□□□ -0.68
CTNNA1-240ENST00000523912 TRIM75PA6NK02 468 aa10.82□□□□□ -0.68
CTNNA1-240ENST00000523912 FMNL1O95466 1100 aaPredicted RBP10.82□□□□□ -0.68
CTNNA1-240ENST00000523912 HLA-DOAP06340 250 aa10.82□□□□□ -0.68
CTNNA1-240ENST00000523912 FCGRTP55899 365 aa10.82□□□□□ -0.68
CTNNA1-240ENST00000523912 C17orf99Q6UX52 265 aa10.82□□□□□ -0.68
CTNNA1-240ENST00000523912 AACSQ86V21 672 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms