RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 HDLBPQ00341 1268 aaKnown RBP6.3□□□□□ -1.4
PCM1-220ENST00000523896 DUSP27Q5VZP5 1158 aa6.3□□□□□ -1.4
PCM1-220ENST00000523896 TPTE2Q6XPS3 522 aa6.3□□□□□ -1.4
PCM1-220ENST00000523896 METTL16Q86W50 562 aaKnown RBP6.3□□□□□ -1.4
PCM1-220ENST00000523896 EZH1Q92800 747 aaPredicted RBP6.3□□□□□ -1.4
PCM1-220ENST00000523896 RNF34Q969K3 372 aa6.3□□□□□ -1.4
PCM1-220ENST00000523896 NECAB3Q96P71 396 aaPredicted RBP6.3□□□□□ -1.4
PCM1-220ENST00000523896 PRR19A6NJB7 356 aa6.29□□□□□ -1.4
PCM1-220ENST00000523896 ENC1O14682 589 aa6.29□□□□□ -1.4
PCM1-220ENST00000523896 AOC2O75106 756 aa6.29□□□□□ -1.4
PCM1-220ENST00000523896 FBXO24O75426 580 aa6.29□□□□□ -1.4
PCM1-220ENST00000523896 F13BP05160 661 aa6.29□□□□□ -1.4
PCM1-220ENST00000523896 CTSBP07858 339 aa6.29□□□□□ -1.4
PCM1-220ENST00000523896 NFICP08651 508 aa6.29□□□□□ -1.4
PCM1-220ENST00000523896 SPINK2P20155 84 aa6.29□□□□□ -1.4
PCM1-220ENST00000523896 GP2P55259 537 aaKnown RBP6.29□□□□□ -1.4
PCM1-220ENST00000523896 CCDC85BQ15834 202 aaPredicted RBP6.29□□□□□ -1.4
PCM1-220ENST00000523896 HS2ST1Q7LGA3 356 aa6.29□□□□□ -1.4
PCM1-220ENST00000523896 ERMP1Q7Z2K6 904 aa6.29□□□□□ -1.4
PCM1-220ENST00000523896 ZAR1Q86SH2 424 aa6.29□□□□□ -1.4
PCM1-220ENST00000523896 TMEM39AQ9NV64 488 aa6.29□□□□□ -1.4
PCM1-220ENST00000523896 DAGLAQ9Y4D2 1042 aa6.29□□□□□ -1.4
PCM1-220ENST00000523896 CYP26A1O43174 497 aa6.28□□□□□ -1.4
PCM1-220ENST00000523896 MED26O95402 600 aa6.28□□□□□ -1.4
PCM1-220ENST00000523896 CELA3AP09093 270 aa6.28□□□□□ -1.4
PCM1-220ENST00000523896 FOSL1P15407 271 aa6.28□□□□□ -1.4
PCM1-220ENST00000523896 DTX1Q86Y01 620 aa6.28□□□□□ -1.4
PCM1-220ENST00000523896 WDR18Q9BV38 432 aa6.28□□□□□ -1.4
PCM1-220ENST00000523896 ZC3H12CQ9C0D7 883 aaKnown RBP6.28□□□□□ -1.4
PCM1-220ENST00000523896 ATXN3LQ9H3M9 355 aa6.28□□□□□ -1.4
PCM1-220ENST00000523896 PRKAG2Q9UGJ0 569 aa6.28□□□□□ -1.4
PCM1-220ENST00000523896 SYNGAP1Q96PV0 1343 aa6.27□□□□□ -1.41
PCM1-220ENST00000523896 ECEL1O95672 775 aa6.27□□□□□ -1.41
PCM1-220ENST00000523896 GSTP1P09211 210 aaKnown RBP6.27□□□□□ -1.41
PCM1-220ENST00000523896 RLBP1P12271 317 aa6.27□□□□□ -1.41
PCM1-220ENST00000523896 LIG1P18858 919 aa6.27□□□□□ -1.41
PCM1-220ENST00000523896 ID3Q02535 119 aa6.27□□□□□ -1.41
PCM1-220ENST00000523896 KCNB2Q92953 911 aa6.27□□□□□ -1.41
PCM1-220ENST00000523896 EMILIN2Q9BXX0 1053 aa6.27□□□□□ -1.41
PCM1-220ENST00000523896 SEMA6CQ9H3T2 930 aa6.27□□□□□ -1.41
PCM1-220ENST00000523896 ACSS3Q9H6R3 686 aa6.27□□□□□ -1.41
PCM1-220ENST00000523896 KRT82Q9NSB4 513 aa6.27□□□□□ -1.41
PCM1-220ENST00000523896 FAM105AQ9NUU6 356 aa6.27□□□□□ -1.41
PCM1-220ENST00000523896 SAMM50Q9Y512 469 aa6.27□□□□□ -1.41
PCM1-220ENST00000523896 PAX4O43316 350 aa6.26□□□□□ -1.41
PCM1-220ENST00000523896 PWP1Q13610 501 aa6.26□□□□□ -1.41
PCM1-220ENST00000523896 MCTP1Q6DN14 999 aa6.26□□□□□ -1.41
PCM1-220ENST00000523896 NT5DC4Q86YG4 428 aa6.26□□□□□ -1.41
PCM1-220ENST00000523896 RSRP1Q9BUV0 290 aa6.26□□□□□ -1.41
PCM1-220ENST00000523896 CCDC86Q9H6F5 360 aaKnown RBP6.26□□□□□ -1.41
PCM1-220ENST00000523896 GGT7Q9UJ14 662 aa6.26□□□□□ -1.41
PCM1-220ENST00000523896 RNGTTO60942 597 aaKnown RBP6.25□□□□□ -1.41
PCM1-220ENST00000523896 PAGE1O75459 146 aa6.25□□□□□ -1.41
PCM1-220ENST00000523896 NME2P22392 152 aa6.25□□□□□ -1.41
PCM1-220ENST00000523896 HOXA10P31260 410 aaPredicted RBP6.25□□□□□ -1.41
PCM1-220ENST00000523896 LIG3P49916 1009 aa6.25□□□□□ -1.41
PCM1-220ENST00000523896 RPS26P62854 115 aaKnown RBP6.25□□□□□ -1.41
PCM1-220ENST00000523896 RAD51AP2Q09MP3 1159 aa6.25□□□□□ -1.41
PCM1-220ENST00000523896 CYP27C1Q4G0S4 372 aa6.25□□□□□ -1.41
PCM1-220ENST00000523896 LCE3BQ5TA77 95 aa6.25□□□□□ -1.41
PCM1-220ENST00000523896 VSIG10LQ86VR7 867 aa6.25□□□□□ -1.41
PCM1-220ENST00000523896 SULF2Q8IWU5 870 aa6.25□□□□□ -1.41
PCM1-220ENST00000523896 ACSBG1Q96GR2 724 aa6.25□□□□□ -1.41
PCM1-220ENST00000523896 CBX8Q9HC52 389 aa6.25□□□□□ -1.41
PCM1-220ENST00000523896 LRRC4CQ9HCJ2 640 aa6.25□□□□□ -1.41
PCM1-220ENST00000523896 SSU72Q9NP77 194 aaKnown RBP6.25□□□□□ -1.41
PCM1-220ENST00000523896 OAS3Q9Y6K5 1087 aaKnown RBP6.25□□□□□ -1.41
PCM1-220ENST00000523896 FAM170BA6NMN3 283 aa6.24□□□□□ -1.41
PCM1-220ENST00000523896 ERCC5P28715 1186 aaPredicted RBP6.24□□□□□ -1.41
PCM1-220ENST00000523896 ADMP35318 185 aa6.24□□□□□ -1.41
PCM1-220ENST00000523896 C9orf131Q5VYM1 1079 aa6.24□□□□□ -1.41
PCM1-220ENST00000523896 PCNX4Q63HM2 1172 aa6.24□□□□□ -1.41
PCM1-220ENST00000523896 TTBK2Q6IQ55 1244 aa6.24□□□□□ -1.41
PCM1-220ENST00000523896 USP48Q86UV5 1035 aa6.24□□□□□ -1.41
PCM1-220ENST00000523896 FBXL18Q96ME1 805 aa6.24□□□□□ -1.41
PCM1-220ENST00000523896 TGIF2Q9GZN2 237 aa6.24□□□□□ -1.41
PCM1-220ENST00000523896 LGR6Q9HBX8 967 aa6.24□□□□□ -1.41
PCM1-220ENST00000523896 PICK1Q9NRD5 415 aa6.24□□□□□ -1.41
PCM1-220ENST00000523896 KBTBD4Q9NVX7 518 aa6.24□□□□□ -1.41
PCM1-220ENST00000523896 BSDC1Q9NW68 430 aaPredicted RBP6.24□□□□□ -1.41
PCM1-220ENST00000523896 TMPRSS2O15393 492 aa6.23□□□□□ -1.41
PCM1-220ENST00000523896 BMP6P22004 513 aa6.23□□□□□ -1.41
PCM1-220ENST00000523896 ARNTP27540 789 aa6.23□□□□□ -1.41
PCM1-220ENST00000523896 KIF4BQ2VIQ3 1234 aa6.23□□□□□ -1.41
PCM1-220ENST00000523896 AGMOQ6ZNB7 445 aa6.23□□□□□ -1.41
PCM1-220ENST00000523896 ARHGAP27Q6ZUM4 889 aa6.23□□□□□ -1.41
PCM1-220ENST00000523896 PDZD3Q86UT5 571 aa6.23□□□□□ -1.41
PCM1-220ENST00000523896 RELL1Q8IUW5 271 aa6.23□□□□□ -1.41
PCM1-220ENST00000523896 TP53INP2Q8IXH6 220 aa6.23□□□□□ -1.41
PCM1-220ENST00000523896 SMYD4Q8IYR2 804 aaPredicted RBP6.23□□□□□ -1.41
PCM1-220ENST00000523896 PHC3Q8NDX5 983 aa6.23□□□□□ -1.41
PCM1-220ENST00000523896 TMEM74Q96NL1 305 aa6.23□□□□□ -1.41
PCM1-220ENST00000523896 GSX1Q9H4S2 264 aaPredicted RBP6.23□□□□□ -1.41
PCM1-220ENST00000523896 COPRSQ9NQ92 184 aa6.23□□□□□ -1.41
PCM1-220ENST00000523896 CRIM1Q9NZV1 1036 aa6.23□□□□□ -1.41
PCM1-220ENST00000523896 DDX41Q9UJV9 622 aaKnown RBP6.23□□□□□ -1.41
PCM1-220ENST00000523896 PPP1R9AQ9ULJ8 1098 aa6.23□□□□□ -1.41
PCM1-220ENST00000523896 ZNF252P-AS1Q0IIN9 211 aa6.22□□□□□ -1.41
PCM1-220ENST00000523896 LRRC14Q15048 493 aa6.22□□□□□ -1.41
PCM1-220ENST00000523896 MAP3K11Q16584 847 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms