RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 SENP2Q9HC62 589 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 CAPN10Q9HC96 672 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 KCTD5Q9NXV2 234 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 CTNNA3Q9UI47 895 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 FAM184BQ9ULE4 1060 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 WDR37Q9Y2I8 494 aa7.47□□□□□ -1.21
SDC2-208ENST00000523877 R3HCC1Q9Y3T6 440 aaKnown RBP7.47□□□□□ -1.21
SDC2-208ENST00000523877 A0A0B4J203 849 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 H0YC42 278 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 SPTLC2O15270 562 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 LILRB3O75022 631 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 SLFN14P0C7P3 912 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 FERP16591 822 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 PLA2G4AP47712 749 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 PPM1FP49593 454 aaPredicted RBP7.46□□□□□ -1.22
SDC2-208ENST00000523877 USP11P51784 963 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 NEK2P51955 445 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 KIF11P52732 1056 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 PTPN5P54829 565 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 NLRP12P59046 1061 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 NFX1Q12986 1120 aaKnown RBP7.46□□□□□ -1.22
SDC2-208ENST00000523877 BECN1Q14457 450 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 SUZ12Q15022 739 aaKnown RBP7.46□□□□□ -1.22
SDC2-208ENST00000523877 ZC3H12BQ5HYM0 836 aaKnown RBP7.46□□□□□ -1.22
SDC2-208ENST00000523877 ARMC4Q5T2S8 1044 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 KIAA1614Q5VZ46 1190 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 NAIF1Q69YI7 327 aaPredicted RBP7.46□□□□□ -1.22
SDC2-208ENST00000523877 FIP1L1Q6UN15 594 aaKnown RBP7.46□□□□□ -1.22
SDC2-208ENST00000523877 MICALCLQ6ZW33 695 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 ARMC9Q7Z3E5 817 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 PARP9Q8IXQ6 854 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 TEX11Q8IYF3 940 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.46□□□□□ -1.22
SDC2-208ENST00000523877 ZNF713Q8N859 430 aaPredicted RBP7.46□□□□□ -1.22
SDC2-208ENST00000523877 ARMC2Q8NEN0 867 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 ARHGEF2Q92974 986 aaKnown RBP7.46□□□□□ -1.22
SDC2-208ENST00000523877 SH3KBP1Q96B97 665 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 MOGAT1Q96PD6 335 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 C2orf49Q9BVC5 232 aaPredicted RBP7.46□□□□□ -1.22
SDC2-208ENST00000523877 BACH2Q9BYV9 841 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 TRIM8Q9BZR9 551 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 OSBPL5Q9H0X9 879 aaPredicted RBP7.46□□□□□ -1.22
SDC2-208ENST00000523877 STIM2Q9P246 746 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 TFIP11Q9UBB9 837 aaKnown RBP7.46□□□□□ -1.22
SDC2-208ENST00000523877 EPS15L1Q9UBC2 864 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 CFDP1Q9UEE9 299 aaPredicted RBP7.46□□□□□ -1.22
SDC2-208ENST00000523877 GTF2A1LQ9UNN4 478 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 CEP131Q9UPN4 1083 aa7.46□□□□□ -1.22
SDC2-208ENST00000523877 CEP104O60308 925 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 ZBED4O75132 1171 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 NEBLO76041 1014 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 STAMBPO95630 424 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 RPSAP08865 295 aaKnown RBP7.45□□□□□ -1.22
SDC2-208ENST00000523877 GNAT2P19087 354 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 CD9P21926 228 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 HPDP32754 393 aaPredicted RBP7.45□□□□□ -1.22
SDC2-208ENST00000523877 S100A5P33763 92 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 ZNF76P36508 570 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 PSMD7P51665 324 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 BPIFB3P59826 476 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 CTAG1AP78358 180 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 LMNB2Q03252 620 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 ADCY1Q08828 1119 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 GRIK3Q13003 919 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 BOLA3Q53S33 107 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 PPP1R18Q6NYC8 613 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 CFAP161Q6P656 301 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 UNC5DQ6UXZ4 953 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 SPATA21Q7Z572 469 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 RASSF3Q86WH2 238 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 CPXCR1Q8N123 301 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 ZNF454Q8N9F8 522 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 MSANTD4Q8NCY6 345 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 TCP11Q8WWU5 503 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 ATP6V1E2Q96A05 226 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 E2F7Q96AV8 911 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 ASIC4Q96FT7 647 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 CFAP36Q96G28 342 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 CEP95Q96GE4 821 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 MRFAP1L1Q96HT8 127 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 FAXDC2Q96IV6 333 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 TNMDQ9H2S6 317 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 CNNM2Q9H8M5 875 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 LUC7LQ9NQ29 371 aaKnown RBP7.45□□□□□ -1.22
SDC2-208ENST00000523877 ENAMQ9NRM1 1142 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 IL20Q9NYY1 176 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 BIN2Q9UBW5 565 aaPredicted RBP7.45□□□□□ -1.22
SDC2-208ENST00000523877 FBXL5Q9UKA1 691 aa7.45□□□□□ -1.22
SDC2-208ENST00000523877 V9GYY5 206 aaPredicted RBP7.45□□□□□ -1.22
SDC2-208ENST00000523877 FANCD2Q9BXW9 1451 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 POM121CA8CG34 1229 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 BHMG1C9JSJ3 638 aaPredicted RBP7.44□□□□□ -1.22
SDC2-208ENST00000523877 M0QX08 132 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 SKAP2O75563 359 aaPredicted RBP7.44□□□□□ -1.22
SDC2-208ENST00000523877 ARIH2O95376 493 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 SRGNP10124 158 aa7.44□□□□□ -1.22
SDC2-208ENST00000523877 XRCC6P12956 609 aaKnown RBP eCLIP7.44□□□□□ -1.22
SDC2-208ENST00000523877 PECAM1P16284 738 aaPredicted RBP7.44□□□□□ -1.22
SDC2-208ENST00000523877 BTF3P20290 206 aaKnown RBP7.44□□□□□ -1.22
SDC2-208ENST00000523877 GNL1P36915 607 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms