RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 ZKSCAN3Q9BRR0 538 aa11.08□□□□□ -0.64
SDCBP-212ENST00000523483 VPS33BQ9H267 617 aa11.08□□□□□ -0.64
SDCBP-212ENST00000523483 SLURP2P0DP57 97 aa11.08□□□□□ -0.64
SDCBP-212ENST00000523483 PSMA5P28066 241 aa11.08□□□□□ -0.64
SDCBP-212ENST00000523483 MFSD6Q6ZSS7 791 aa11.08□□□□□ -0.64
SDCBP-212ENST00000523483 DYNLL2Q96FJ2 89 aa11.08□□□□□ -0.64
SDCBP-212ENST00000523483 LTBP3Q9NS15 1303 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 MYO1BO43795 1136 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 TICAM2Q86XR7 235 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 SLC44A5Q8NCS7 719 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 ZNF526Q8TF50 670 aaPredicted RBP11.07□□□□□ -0.64
SDCBP-212ENST00000523483 PDRG1Q9NUG6 133 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 MYH7P12883 1935 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 FLT1P17948 1338 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 DCAF8L1A6NGE4 600 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 FAM196BA6NMK8 535 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 RHBDL3P58872 404 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 ANAPC15P60006 121 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 CTR9Q6PD62 1173 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 HHIPL2Q6UWX4 724 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 RAB11FIP4Q86YS3 637 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 ATP8A2Q9NTI2 1148 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 SERPINA10Q9UK55 444 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 MTMR7Q9Y216 660 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 H7C1D1 291 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 FZD9O00144 591 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 KDM4AO75164 1064 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 KRT32Q14532 448 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 ZDHHC15Q96MV8 337 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 TRIM34Q9BYJ4 488 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 SLKQ9H2G2 1235 aaPredicted RBP11.07□□□□□ -0.64
SDCBP-212ENST00000523483 MKNK2Q9HBH9 465 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 MYOZ2Q9NPC6 264 aa11.07□□□□□ -0.64
SDCBP-212ENST00000523483 DDX4Q9NQI0 724 aaKnown RBP11.07□□□□□ -0.64
SDCBP-212ENST00000523483 MYH2Q9UKX2 1941 aa11.06□□□□□ -0.64
SDCBP-212ENST00000523483 GAKO14976 1311 aa11.06□□□□□ -0.64
SDCBP-212ENST00000523483 GRIN3BO60391 1043 aa11.06□□□□□ -0.64
SDCBP-212ENST00000523483 PLCD1P51178 756 aa11.06□□□□□ -0.64
SDCBP-212ENST00000523483 STK3Q13188 491 aa11.06□□□□□ -0.64
SDCBP-212ENST00000523483 AGBL3Q8NEM8 1001 aa11.06□□□□□ -0.64
SDCBP-212ENST00000523483 TBC1D2Q9BYX2 928 aa11.06□□□□□ -0.64
SDCBP-212ENST00000523483 BRCA1P38398 1863 aaKnown RBP11.06□□□□□ -0.64
SDCBP-212ENST00000523483 LMOD1P29536 600 aaPredicted RBP11.06□□□□□ -0.64
SDCBP-212ENST00000523483 DPY19L2Q6NUT2 758 aa11.06□□□□□ -0.64
SDCBP-212ENST00000523483 ZFPM1Q8IX07 1006 aa11.06□□□□□ -0.64
SDCBP-212ENST00000523483 CRACR2BQ8N4Y2 399 aaPredicted RBP11.06□□□□□ -0.64
SDCBP-212ENST00000523483 IPO9Q96P70 1041 aaKnown RBP11.06□□□□□ -0.64
SDCBP-212ENST00000523483 SPDYE2BA6NHP3 402 aa11.06□□□□□ -0.64
SDCBP-212ENST00000523483 WDHD1O75717 1129 aaPredicted RBP11.06□□□□□ -0.64
SDCBP-212ENST00000523483 SPDYE6P0CI01 402 aa11.06□□□□□ -0.64
SDCBP-212ENST00000523483 EPS15P42566 896 aa11.06□□□□□ -0.64
SDCBP-212ENST00000523483 PPP4CP60510 307 aa11.06□□□□□ -0.64
SDCBP-212ENST00000523483 FAM47AQ5JRC9 791 aa11.06□□□□□ -0.64
SDCBP-212ENST00000523483 NCOA7Q8NI08 942 aa11.06□□□□□ -0.64
SDCBP-212ENST00000523483 NEDD4P46934 1319 aa11.05□□□□□ -0.64
SDCBP-212ENST00000523483 WNT10BO00744 389 aa11.05□□□□□ -0.64
SDCBP-212ENST00000523483 PPFIA3O75145 1194 aa11.05□□□□□ -0.64
SDCBP-212ENST00000523483 SLC3A2P08195 630 aaKnown RBP11.05□□□□□ -0.64
SDCBP-212ENST00000523483 AKNAD1Q5T1N1 836 aa11.05□□□□□ -0.64
SDCBP-212ENST00000523483 FAM163AQ96GL9 167 aaPredicted RBP11.05□□□□□ -0.64
SDCBP-212ENST00000523483 GPHNQ9NQX3 736 aaPredicted RBP11.05□□□□□ -0.64
SDCBP-212ENST00000523483 ARPP21Q9UBL0 812 aaPredicted RBP11.05□□□□□ -0.64
SDCBP-212ENST00000523483 ASTN2O75129 1339 aaPredicted RBP11.05□□□□□ -0.64
SDCBP-212ENST00000523483 AK2P54819 239 aa11.05□□□□□ -0.64
SDCBP-212ENST00000523483 RUFY3Q7L099 469 aa11.05□□□□□ -0.64
SDCBP-212ENST00000523483 BRF1Q92994 677 aa11.05□□□□□ -0.64
SDCBP-212ENST00000523483 GMLQ99445 158 aa11.05□□□□□ -0.64
SDCBP-212ENST00000523483 NBPF3Q9H094 633 aa11.05□□□□□ -0.64
SDCBP-212ENST00000523483 FER1L6Q2WGJ9 1857 aa11.04□□□□□ -0.64
SDCBP-212ENST00000523483 CCDC88AQ3V6T2 1871 aa11.04□□□□□ -0.64
SDCBP-212ENST00000523483 TSPY2A6NKD2 308 aa11.04□□□□□ -0.64
SDCBP-212ENST00000523483 EPB41L2O43491 1005 aaKnown RBP11.04□□□□□ -0.64
SDCBP-212ENST00000523483 PRC1O43663 620 aa11.04□□□□□ -0.64
SDCBP-212ENST00000523483 FKBP1AP62942 108 aaKnown RBP11.04□□□□□ -0.64
SDCBP-212ENST00000523483 KIF4BQ2VIQ3 1234 aa11.04□□□□□ -0.64
SDCBP-212ENST00000523483 EAPPQ56P03 285 aaPredicted RBP11.04□□□□□ -0.64
SDCBP-212ENST00000523483 PRAMEF18Q5VWM3 479 aa11.04□□□□□ -0.64
SDCBP-212ENST00000523483 NFXL1Q6ZNB6 911 aa11.04□□□□□ -0.64
SDCBP-212ENST00000523483 Q6ZUG5 572 aa11.04□□□□□ -0.64
SDCBP-212ENST00000523483 MPHOSPH10O00566 681 aaKnown RBP11.04□□□□□ -0.64
SDCBP-212ENST00000523483 RAD21O60216 631 aa11.04□□□□□ -0.64
SDCBP-212ENST00000523483 RPS6KB1P23443 525 aa11.04□□□□□ -0.64
SDCBP-212ENST00000523483 PDE4BQ07343 736 aa11.04□□□□□ -0.64
SDCBP-212ENST00000523483 GPC2Q8N158 579 aa11.04□□□□□ -0.64
SDCBP-212ENST00000523483 RNF41Q9H4P4 317 aaPredicted RBP11.04□□□□□ -0.64
SDCBP-212ENST00000523483 DOCK2Q92608 1830 aa11.04□□□□□ -0.64
SDCBP-212ENST00000523483 HLA-DOAP06340 250 aa11.03□□□□□ -0.64
SDCBP-212ENST00000523483 ATP2B2Q01814 1243 aa11.03□□□□□ -0.64
SDCBP-212ENST00000523483 CERS3Q8IU89 383 aa11.03□□□□□ -0.64
SDCBP-212ENST00000523483 NKX2-3Q8TAU0 364 aa11.03□□□□□ -0.64
SDCBP-212ENST00000523483 UBAC1Q9BSL1 405 aa11.03□□□□□ -0.64
SDCBP-212ENST00000523483 ZNF70Q9UC06 446 aaPredicted RBP11.03□□□□□ -0.64
SDCBP-212ENST00000523483 BAZ2AQ9UIF9 1905 aaKnown RBP11.03□□□□□ -0.64
SDCBP-212ENST00000523483 MCM5P33992 734 aa11.03□□□□□ -0.64
SDCBP-212ENST00000523483 HDLBPQ00341 1268 aaKnown RBP11.03□□□□□ -0.64
SDCBP-212ENST00000523483 ALX1Q15699 326 aa11.03□□□□□ -0.64
SDCBP-212ENST00000523483 DHX32Q7L7V1 743 aaKnown RBP11.03□□□□□ -0.64
SDCBP-212ENST00000523483 TRPM4Q8TD43 1214 aa11.03□□□□□ -0.64
SDCBP-212ENST00000523483 CSRNP1Q96S65 589 aa11.03□□□□□ -0.64
SDCBP-212ENST00000523483 TMEM39BQ9GZU3 492 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms