RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	AKAP4	Q5JQC9	854 aa		7.32	□□□□□ -1.24
CTNNA1-238	ENST00000523298	PPM1J	Q5JR12	505 aa		7.32	□□□□□ -1.24
CTNNA1-238	ENST00000523298	EXOSC6	Q5RKV6	272 aa	Known RBP	7.32	□□□□□ -1.24
CTNNA1-238	ENST00000523298	CYFIP1	Q7L576	1253 aa		7.32	□□□□□ -1.24
CTNNA1-238	ENST00000523298	LENG1	Q96BZ8	264 aa	Predicted RBP	7.32	□□□□□ -1.24
CTNNA1-238	ENST00000523298	ACSBG1	Q96GR2	724 aa		7.32	□□□□□ -1.24
CTNNA1-238	ENST00000523298	MRPL18	Q9H0U6	180 aa	Known RBP	7.32	□□□□□ -1.24
CTNNA1-238	ENST00000523298	PPT2	Q9UMR5	302 aa		7.32	□□□□□ -1.24
CTNNA1-238	ENST00000523298	ITGB2	P05107	769 aa		7.31	□□□□□ -1.24
CTNNA1-238	ENST00000523298	NEFM	P07197	916 aa		7.31	□□□□□ -1.24
CTNNA1-238	ENST00000523298	ADH5	P11766	374 aa		7.31	□□□□□ -1.24
CTNNA1-238	ENST00000523298	CHRNA4	P43681	627 aa		7.31	□□□□□ -1.24
CTNNA1-238	ENST00000523298	PREP	P48147	710 aa		7.31	□□□□□ -1.24
CTNNA1-238	ENST00000523298	SOX9	P48436	509 aa		7.31	□□□□□ -1.24
CTNNA1-238	ENST00000523298	PRRT3	Q5FWE3	981 aa		7.31	□□□□□ -1.24
CTNNA1-238	ENST00000523298	CCDC81	Q6ZN84	652 aa		7.31	□□□□□ -1.24
CTNNA1-238	ENST00000523298		Q6ZS46	218 aa		7.31	□□□□□ -1.24
CTNNA1-238	ENST00000523298	TMEM130	Q8N3G9	435 aa		7.31	□□□□□ -1.24
CTNNA1-238	ENST00000523298	NKD1	Q969G9	470 aa		7.31	□□□□□ -1.24
CTNNA1-238	ENST00000523298	UBL7	Q96S82	380 aa	Predicted RBP	7.31	□□□□□ -1.24
CTNNA1-238	ENST00000523298	ANTXR1	Q9H6X2	564 aa		7.31	□□□□□ -1.24
CTNNA1-238	ENST00000523298	DISC1	Q9NRI5	854 aa		7.31	□□□□□ -1.24
CTNNA1-238	ENST00000523298	NOP53	Q9NZM5	478 aa	Known RBP	7.31	□□□□□ -1.24
CTNNA1-238	ENST00000523298	CRIM1	Q9NZV1	1036 aa		7.31	□□□□□ -1.24
CTNNA1-238	ENST00000523298	PRKAG2	Q9UGJ0	569 aa		7.31	□□□□□ -1.24
CTNNA1-238	ENST00000523298	HIF3A	Q9Y2N7	669 aa		7.31	□□□□□ -1.24
CTNNA1-238	ENST00000523298	MBTPS1	Q14703	1052 aa		7.3	□□□□□ -1.24
CTNNA1-238	ENST00000523298	SCARA3	Q6AZY7	606 aa		7.3	□□□□□ -1.24
CTNNA1-238	ENST00000523298	SMG8	Q8ND04	991 aa	Known RBP	7.3	□□□□□ -1.24
CTNNA1-238	ENST00000523298	SREK1	Q8WXA9	508 aa	Known RBP	7.3	□□□□□ -1.24
CTNNA1-238	ENST00000523298	SCARF2	Q96GP6	870 aa	Predicted RBP	7.3	□□□□□ -1.24
CTNNA1-238	ENST00000523298	SUGCT	Q9HAC7	445 aa		7.3	□□□□□ -1.24
CTNNA1-238	ENST00000523298	STK17A	Q9UEE5	414 aa		7.3	□□□□□ -1.24
CTNNA1-238	ENST00000523298	SPDYE3	A6NKU9	549 aa		7.29	□□□□□ -1.24
CTNNA1-238	ENST00000523298	LMNB1	P20700	586 aa		7.29	□□□□□ -1.24
CTNNA1-238	ENST00000523298	IREB2	P48200	963 aa	Known RBP	7.29	□□□□□ -1.24
CTNNA1-238	ENST00000523298	ARID5A	Q03989	594 aa		7.29	□□□□□ -1.24
CTNNA1-238	ENST00000523298	C2CD4A	Q8NCU7	369 aa	Predicted RBP	7.29	□□□□□ -1.24
CTNNA1-238	ENST00000523298	WFDC12	Q8WWY7	111 aa		7.29	□□□□□ -1.24
CTNNA1-238	ENST00000523298	DHX38	Q92620	1227 aa	Known RBP	7.29	□□□□□ -1.24
CTNNA1-238	ENST00000523298	MEGF10	Q96KG7	1140 aa		7.29	□□□□□ -1.24
CTNNA1-238	ENST00000523298	FANCD2OS	Q96PS1	177 aa		7.29	□□□□□ -1.24
CTNNA1-238	ENST00000523298	TANGO6	Q9C0B7	1094 aa		7.29	□□□□□ -1.24
CTNNA1-238	ENST00000523298	RNF208	Q9H0X6	261 aa		7.29	□□□□□ -1.24
CTNNA1-238	ENST00000523298	GSX1	Q9H4S2	264 aa	Predicted RBP	7.29	□□□□□ -1.24
CTNNA1-238	ENST00000523298	ACTL7B	Q9Y614	415 aa		7.29	□□□□□ -1.24
CTNNA1-238	ENST00000523298	ID3	Q02535	119 aa		7.28	□□□□□ -1.24
CTNNA1-238	ENST00000523298	SOX4	Q06945	474 aa	Predicted RBP	7.28	□□□□□ -1.24
CTNNA1-238	ENST00000523298	ADGRE1	Q14246	886 aa		7.28	□□□□□ -1.24
CTNNA1-238	ENST00000523298	GK5	Q6ZS86	529 aa		7.28	□□□□□ -1.24
CTNNA1-238	ENST00000523298	FAM169B	Q8N8A8	192 aa		7.28	□□□□□ -1.24
CTNNA1-238	ENST00000523298	DCAF5	Q96JK2	942 aa		7.28	□□□□□ -1.24
CTNNA1-238	ENST00000523298	AKTIP	Q9H8T0	292 aa		7.28	□□□□□ -1.24
CTNNA1-238	ENST00000523298	FBRS	Q9HAH7	460 aa		7.28	□□□□□ -1.24
CTNNA1-238	ENST00000523298	FAM105A	Q9NUU6	356 aa		7.28	□□□□□ -1.24
CTNNA1-238	ENST00000523298	ROBO2	Q9HCK4	1378 aa		7.28	□□□□□ -1.24
CTNNA1-238	ENST00000523298	PRAMEF27	A3QJZ7	478 aa		7.27	□□□□□ -1.25
CTNNA1-238	ENST00000523298	TTLL4	Q14679	1199 aa		7.27	□□□□□ -1.25
CTNNA1-238	ENST00000523298	CWF19L2	Q2TBE0	894 aa	Known RBP	7.27	□□□□□ -1.25
CTNNA1-238	ENST00000523298	NUTM2G	Q5VZR2	741 aa		7.27	□□□□□ -1.25
CTNNA1-238	ENST00000523298	CD163	Q86VB7	1156 aa		7.27	□□□□□ -1.25
CTNNA1-238	ENST00000523298	C12orf50	Q8NA57	414 aa	Predicted RBP	7.27	□□□□□ -1.25
CTNNA1-238	ENST00000523298	SHD	Q96IW2	340 aa		7.27	□□□□□ -1.25
CTNNA1-238	ENST00000523298	SEC16B	Q96JE7	1060 aa		7.27	□□□□□ -1.25
CTNNA1-238	ENST00000523298	RAD18	Q9NS91	495 aa		7.27	□□□□□ -1.25
CTNNA1-238	ENST00000523298	USP21	Q9UK80	565 aa		7.27	□□□□□ -1.25
CTNNA1-238	ENST00000523298	AP4E1	Q9UPM8	1137 aa		7.27	□□□□□ -1.25
CTNNA1-238	ENST00000523298	PCDHB14	Q9Y5E9	798 aa		7.27	□□□□□ -1.25
CTNNA1-238	ENST00000523298	MRVI1	Q9Y6F6	885 aa		7.27	□□□□□ -1.25
CTNNA1-238	ENST00000523298	SYNGAP1	Q96PV0	1343 aa		7.27	□□□□□ -1.25
CTNNA1-238	ENST00000523298	PRR36	Q9H6K5	1346 aa		7.27	□□□□□ -1.25
CTNNA1-238	ENST00000523298	PIK3R2	O00459	728 aa		7.26	□□□□□ -1.25
CTNNA1-238	ENST00000523298	HTR3B	O95264	441 aa		7.26	□□□□□ -1.25
CTNNA1-238	ENST00000523298	HCLS1	P14317	486 aa	Predicted RBP	7.26	□□□□□ -1.25
CTNNA1-238	ENST00000523298	GRK4	P32298	578 aa		7.26	□□□□□ -1.25
CTNNA1-238	ENST00000523298	MCM4	P33991	863 aa		7.26	□□□□□ -1.25
CTNNA1-238	ENST00000523298	ETFB	P38117	255 aa		7.26	□□□□□ -1.25
CTNNA1-238	ENST00000523298	ERVK-24	P63145	666 aa		7.26	□□□□□ -1.25
CTNNA1-238	ENST00000523298	NRG1	Q02297	640 aa	Predicted RBP	7.26	□□□□□ -1.25
CTNNA1-238	ENST00000523298	NKG7	Q16617	165 aa		7.26	□□□□□ -1.25
CTNNA1-238	ENST00000523298	ZBTB37	Q5TC79	503 aa		7.26	□□□□□ -1.25
CTNNA1-238	ENST00000523298	CDPF1	Q6NVV7	123 aa		7.26	□□□□□ -1.25
CTNNA1-238	ENST00000523298	FAM46A	Q96IP4	442 aa	Known RBP	7.26	□□□□□ -1.25
CTNNA1-238	ENST00000523298	EHMT1	Q9H9B1	1298 aa		7.26	□□□□□ -1.25
CTNNA1-238	ENST00000523298	USP35	Q9P2H5	1018 aa		7.26	□□□□□ -1.25
CTNNA1-238	ENST00000523298	SNCAIP	Q9Y6H5	919 aa		7.26	□□□□□ -1.25
CTNNA1-238	ENST00000523298	C1QTNF9B	B2RNN3	333 aa		7.25	□□□□□ -1.25
CTNNA1-238	ENST00000523298	DYNC1LI2	O43237	492 aa	Predicted RBP	7.25	□□□□□ -1.25
CTNNA1-238	ENST00000523298	EIF4EBP3	O60516	100 aa	Predicted RBP	7.25	□□□□□ -1.25
CTNNA1-238	ENST00000523298	ATE1	O95260	518 aa		7.25	□□□□□ -1.25
CTNNA1-238	ENST00000523298	BPNT1	O95861	308 aa		7.25	□□□□□ -1.25
CTNNA1-238	ENST00000523298	GLB1	P16278	677 aa		7.25	□□□□□ -1.25
CTNNA1-238	ENST00000523298	GNL2	Q13823	731 aa	Known RBP	7.25	□□□□□ -1.25
CTNNA1-238	ENST00000523298	RUFY4	Q6ZNE9	571 aa		7.25	□□□□□ -1.25
CTNNA1-238	ENST00000523298	DYM	Q7RTS9	669 aa		7.25	□□□□□ -1.25
CTNNA1-238	ENST00000523298	HDX	Q7Z353	690 aa		7.25	□□□□□ -1.25
CTNNA1-238	ENST00000523298	REXO1	Q8N1G1	1221 aa	Known RBP	7.25	□□□□□ -1.25
CTNNA1-238	ENST00000523298	ARMC10	Q8N2F6	343 aa		7.25	□□□□□ -1.25
CTNNA1-238	ENST00000523298	ISL2	Q96A47	359 aa		7.25	□□□□□ -1.25
CTNNA1-238	ENST00000523298	ELMO3	Q96BJ8	720 aa		7.25	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms