RNA–Protein interactions for RNA: ENST00000523240.5

HDAC2-214, Transcript of histone deacetylase 2, humanhuman

TSL 5

Gene HDAC2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-214ENST00000523240 CYP7A1P22680 504 aa27.4■■□□□ 1.98
HDAC2-214ENST00000523240 RHBDL3P58872 404 aa27.4■■□□□ 1.98
HDAC2-214ENST00000523240 VGLL4Q14135 290 aa27.4■■□□□ 1.98
HDAC2-214ENST00000523240 ZFPM1Q8IX07 1006 aa27.4■■□□□ 1.98
HDAC2-214ENST00000523240 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.4■■□□□ 1.98
HDAC2-214ENST00000523240 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.39■■□□□ 1.98
HDAC2-214ENST00000523240 OPTNQ96CV9 577 aa27.39■■□□□ 1.98
HDAC2-214ENST00000523240 ANTXR1Q9H6X2 564 aa27.39■■□□□ 1.98
HDAC2-214ENST00000523240 DDX4Q9NQI0 724 aaKnown RBP27.39■■□□□ 1.98
HDAC2-214ENST00000523240 RNF186Q9NXI6 227 aa27.39■■□□□ 1.98
HDAC2-214ENST00000523240 MAGEB6Q8N7X4 407 aa27.38■■□□□ 1.97
HDAC2-214ENST00000523240 SH3RF3Q8TEJ3 882 aaPredicted RBP27.38■■□□□ 1.97
HDAC2-214ENST00000523240 GPATCH3Q96I76 525 aa27.38■■□□□ 1.97
HDAC2-214ENST00000523240 ZBTB47Q9UFB7 747 aaPredicted RBP27.38■■□□□ 1.97
HDAC2-214ENST00000523240 CASP8AP2Q9UKL3 1982 aa27.38■■□□□ 1.97
HDAC2-214ENST00000523240 CDK5RAP2Q96SN8 1893 aa27.38■■□□□ 1.97
HDAC2-214ENST00000523240 GOLIM4O00461 696 aa27.37■■□□□ 1.97
HDAC2-214ENST00000523240 TNS4Q8IZW8 715 aa27.37■■□□□ 1.97
HDAC2-214ENST00000523240 BOLA2Q9H3K6 86 aa27.37■■□□□ 1.97
HDAC2-214ENST00000523240 LAMB1P07942 1786 aa27.37■■□□□ 1.97
HDAC2-214ENST00000523240 TM4SF4P48230 202 aa27.36■■□□□ 1.97
HDAC2-214ENST00000523240 INHBEP58166 350 aa27.36■■□□□ 1.97
HDAC2-214ENST00000523240 ZKSCAN4Q969J2 545 aaPredicted RBP27.36■■□□□ 1.97
HDAC2-214ENST00000523240 OTUD5Q96G74 571 aa27.36■■□□□ 1.97
HDAC2-214ENST00000523240 FOCADQ5VW36 1801 aa27.36■■□□□ 1.97
HDAC2-214ENST00000523240 NPM3O75607 178 aaKnown RBP27.35■■□□□ 1.97
HDAC2-214ENST00000523240 ATP5JP18859 108 aa27.35■■□□□ 1.97
HDAC2-214ENST00000523240 TMED8Q6PL24 325 aaPredicted RBP27.35■■□□□ 1.97
HDAC2-214ENST00000523240 ADGRA1Q86SQ6 560 aa27.35■■□□□ 1.97
HDAC2-214ENST00000523240 DDTLA6NHG4 134 aaPredicted RBP27.34■■□□□ 1.97
HDAC2-214ENST00000523240 PPP4CP60510 307 aa27.34■■□□□ 1.97
HDAC2-214ENST00000523240 AAMPQ13685 434 aa27.34■■□□□ 1.97
HDAC2-214ENST00000523240 CERS3Q8IU89 383 aa27.34■■□□□ 1.97
HDAC2-214ENST00000523240 OSBPL5Q9H0X9 879 aaPredicted RBP27.34■■□□□ 1.97
HDAC2-214ENST00000523240 PAG1Q9NWQ8 432 aa27.34■■□□□ 1.97
HDAC2-214ENST00000523240 MYH7P12883 1935 aa27.33■■□□□ 1.97
HDAC2-214ENST00000523240 INPP5BP32019 993 aa27.33■■□□□ 1.97
HDAC2-214ENST00000523240 GJA5P36382 358 aa27.33■■□□□ 1.97
HDAC2-214ENST00000523240 ERO1BQ86YB8 467 aa27.33■■□□□ 1.97
HDAC2-214ENST00000523240 MIGA1Q8NAN2 632 aa27.33■■□□□ 1.97
HDAC2-214ENST00000523240 SUPT16HQ9Y5B9 1047 aaKnown RBP27.33■■□□□ 1.97
HDAC2-214ENST00000523240 SNCAIPQ9Y6H5 919 aa27.33■■□□□ 1.97
HDAC2-214ENST00000523240 SPDYE5A6NIY4 337 aa27.32■■□□□ 1.96
HDAC2-214ENST00000523240 ALDH1A1P00352 501 aa27.32■■□□□ 1.96
HDAC2-214ENST00000523240 OTUD7BQ6GQQ9 843 aa27.32■■□□□ 1.96
HDAC2-214ENST00000523240 SH3BP5LQ7L8J4 393 aa27.32■■□□□ 1.96
HDAC2-214ENST00000523240 TGFBRAP1Q8WUH2 860 aa27.32■■□□□ 1.96
HDAC2-214ENST00000523240 CNKSR2Q8WXI2 1034 aa27.32■■□□□ 1.96
HDAC2-214ENST00000523240 ECHDC1Q9NTX5 307 aa27.32■■□□□ 1.96
HDAC2-214ENST00000523240 ATRNL1Q5VV63 1379 aa27.32■■□□□ 1.96
HDAC2-214ENST00000523240 COL2A1P02458 1487 aaPredicted RBP27.32■■□□□ 1.96
HDAC2-214ENST00000523240 DYNLL1P63167 89 aaKnown RBP27.31■■□□□ 1.96
HDAC2-214ENST00000523240 SLC9C2Q5TAH2 1124 aa27.31■■□□□ 1.96
HDAC2-214ENST00000523240 MAPKAPK5Q8IW41 473 aa27.31■■□□□ 1.96
HDAC2-214ENST00000523240 HAUS7Q99871 368 aa27.31■■□□□ 1.96
HDAC2-214ENST00000523240 MYH1P12882 1939 aa27.3■■□□□ 1.96
HDAC2-214ENST00000523240 GTF2A2P52657 109 aa27.3■■□□□ 1.96
HDAC2-214ENST00000523240 IFNL1Q8IU54 200 aa27.3■■□□□ 1.96
HDAC2-214ENST00000523240 EDC3Q96F86 508 aaKnown RBP27.3■■□□□ 1.96
HDAC2-214ENST00000523240 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.3■■□□□ 1.96
HDAC2-214ENST00000523240 ZNF112Q9UJU3 913 aa27.3■■□□□ 1.96
HDAC2-214ENST00000523240 PDE6AP16499 860 aa27.29■■□□□ 1.96
HDAC2-214ENST00000523240 USP5P45974 858 aa27.29■■□□□ 1.96
HDAC2-214ENST00000523240 TRIM34Q9BYJ4 488 aa27.29■■□□□ 1.96
HDAC2-214ENST00000523240 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.29■■□□□ 1.96
HDAC2-214ENST00000523240 PICK1Q9NRD5 415 aa27.29■■□□□ 1.96
HDAC2-214ENST00000523240 DOCK1Q14185 1865 aa27.29■■□□□ 1.96
HDAC2-214ENST00000523240 FLT1P17948 1338 aa27.28■■□□□ 1.96
HDAC2-214ENST00000523240 CCL15-CCL14A0A0B4J2E2 113 aa27.28■■□□□ 1.96
HDAC2-214ENST00000523240 TBC1D8O95759 1140 aa27.28■■□□□ 1.96
HDAC2-214ENST00000523240 CCL15Q16663 113 aa27.28■■□□□ 1.96
HDAC2-214ENST00000523240 DHX36Q9H2U1 1008 aaKnown RBP27.28■■□□□ 1.96
HDAC2-214ENST00000523240 ZNF532Q9HCE3 1301 aa27.27■■□□□ 1.96
HDAC2-214ENST00000523240 MAGEB6P1A0A0J9YX57 407 aa27.27■■□□□ 1.96
HDAC2-214ENST00000523240 PPATQ06203 517 aa27.27■■□□□ 1.96
HDAC2-214ENST00000523240 PPIL2Q13356 520 aa27.27■■□□□ 1.96
HDAC2-214ENST00000523240 NOL9Q5SY16 702 aaKnown RBP27.27■■□□□ 1.96
HDAC2-214ENST00000523240 SNAPC2Q13487 334 aa27.26■■□□□ 1.95
HDAC2-214ENST00000523240 HDAC1Q13547 482 aaPredicted RBP27.26■■□□□ 1.95
HDAC2-214ENST00000523240 GCC1Q96CN9 775 aa27.26■■□□□ 1.95
HDAC2-214ENST00000523240 IGF2BP3O00425 579 aaKnown RBP eCLIP27.25■■□□□ 1.95
HDAC2-214ENST00000523240 HLA-DOAP06340 250 aa27.25■■□□□ 1.95
HDAC2-214ENST00000523240 ANKRD45Q5TZF3 282 aa27.25■■□□□ 1.95
HDAC2-214ENST00000523240 SCYL3Q8IZE3 742 aa27.25■■□□□ 1.95
HDAC2-214ENST00000523240 CRACR2BQ8N4Y2 399 aaPredicted RBP27.25■■□□□ 1.95
HDAC2-214ENST00000523240 EXOC6Q8TAG9 804 aa27.25■■□□□ 1.95
HDAC2-214ENST00000523240 PI4KBQ9UBF8 816 aa27.25■■□□□ 1.95
HDAC2-214ENST00000523240 SAP30BPQ9UHR5 308 aaKnown RBP27.25■■□□□ 1.95
HDAC2-214ENST00000523240 ATAD5Q96QE3 1844 aa27.25■■□□□ 1.95
HDAC2-214ENST00000523240 NAV1Q8NEY1 1877 aa27.24■■□□□ 1.95
HDAC2-214ENST00000523240 FAM196BA6NMK8 535 aa27.24■■□□□ 1.95
HDAC2-214ENST00000523240 PHF20L1A8MW92 1017 aa27.24■■□□□ 1.95
HDAC2-214ENST00000523240 IRF6O14896 467 aa27.24■■□□□ 1.95
HDAC2-214ENST00000523240 TBC1D12O60347 775 aa27.24■■□□□ 1.95
HDAC2-214ENST00000523240 CETPP11597 493 aa27.24■■□□□ 1.95
HDAC2-214ENST00000523240 MAP3K10Q02779 954 aa27.24■■□□□ 1.95
HDAC2-214ENST00000523240 TSHZ3Q63HK5 1081 aa27.24■■□□□ 1.95
HDAC2-214ENST00000523240 ZSCAN25Q6NSZ9 544 aa27.24■■□□□ 1.95
HDAC2-214ENST00000523240 RWDD1Q9H446 243 aaPredicted RBP27.24■■□□□ 1.95
HDAC2-214ENST00000523240 HERC5Q9UII4 1024 aaKnown RBP27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms