RNA–Protein interactions for RNA: ENST00000523004.1

GM2A-202, Transcript of GM2 ganglioside activator, humanhuman

TSL 1 (best)

Gene GM2A, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-202ENST00000523004 GPAT2Q6NUI2 795 aa9.79□□□□□ -0.84
GM2A-202ENST00000523004 ZGPATQ8N5A5 531 aaKnown RBP9.79□□□□□ -0.84
GM2A-202ENST00000523004 FAM163AQ96GL9 167 aaPredicted RBP9.79□□□□□ -0.84
GM2A-202ENST00000523004 API5Q9BZZ5 524 aaKnown RBP9.79□□□□□ -0.84
GM2A-202ENST00000523004 GTF3C3Q9Y5Q9 886 aa9.79□□□□□ -0.84
GM2A-202ENST00000523004 LRRFIP2Q9Y608 721 aaKnown RBP9.79□□□□□ -0.84
GM2A-202ENST00000523004 PDS5AQ29RF7 1337 aaKnown RBP9.79□□□□□ -0.84
GM2A-202ENST00000523004 RFX7Q2KHR2 1363 aa9.78□□□□□ -0.84
GM2A-202ENST00000523004 RANBP2P49792 3224 aaKnown RBP9.78□□□□□ -0.84
GM2A-202ENST00000523004 A0A0G2JLL6 359 aaPredicted RBP9.78□□□□□ -0.84
GM2A-202ENST00000523004 BCRP11274 1271 aa9.78□□□□□ -0.84
GM2A-202ENST00000523004 PTPRAP18433 802 aa9.78□□□□□ -0.84
GM2A-202ENST00000523004 RGS3P49796 1198 aa9.78□□□□□ -0.84
GM2A-202ENST00000523004 TIMM10P62072 90 aa9.78□□□□□ -0.84
GM2A-202ENST00000523004 RASGRF1Q13972 1273 aa9.78□□□□□ -0.84
GM2A-202ENST00000523004 MTFR1Q15390 333 aa9.78□□□□□ -0.84
GM2A-202ENST00000523004 SH3BP5LQ7L8J4 393 aa9.78□□□□□ -0.84
GM2A-202ENST00000523004 PRRT2Q7Z6L0 340 aaPredicted RBP9.78□□□□□ -0.84
GM2A-202ENST00000523004 SCYL3Q8IZE3 742 aa9.78□□□□□ -0.84
GM2A-202ENST00000523004 PARK7Q99497 189 aaKnown RBP9.78□□□□□ -0.84
GM2A-202ENST00000523004 MEIS3Q99687 375 aa9.78□□□□□ -0.84
GM2A-202ENST00000523004 AFG3L2Q9Y4W6 797 aa9.78□□□□□ -0.84
GM2A-202ENST00000523004 PHIPQ8WWQ0 1821 aa9.77□□□□□ -0.84
GM2A-202ENST00000523004 DDTLA6NHG4 134 aaPredicted RBP9.77□□□□□ -0.85
GM2A-202ENST00000523004 ECM2O94769 699 aaPredicted RBP9.77□□□□□ -0.85
GM2A-202ENST00000523004 FMNL1O95466 1100 aaPredicted RBP9.77□□□□□ -0.85
GM2A-202ENST00000523004 CYP2C8P10632 490 aa9.77□□□□□ -0.85
GM2A-202ENST00000523004 GRK4P32298 578 aa9.77□□□□□ -0.85
GM2A-202ENST00000523004 FXR1P51114 621 aaKnown RBP eCLIP9.77□□□□□ -0.85
GM2A-202ENST00000523004 RARSP54136 660 aaKnown RBP9.77□□□□□ -0.85
GM2A-202ENST00000523004 MTX1Q13505 466 aa9.77□□□□□ -0.85
GM2A-202ENST00000523004 SPTY2D1Q68D10 685 aaPredicted RBP9.77□□□□□ -0.85
GM2A-202ENST00000523004 FASTKD5Q7L8L6 764 aaKnown RBP9.77□□□□□ -0.85
GM2A-202ENST00000523004 DZIP1Q86YF9 867 aaKnown RBP9.77□□□□□ -0.85
GM2A-202ENST00000523004 SLF2Q8IX21 1173 aa9.77□□□□□ -0.85
GM2A-202ENST00000523004 RAET1EQ8TD07 263 aa9.77□□□□□ -0.85
GM2A-202ENST00000523004 ARHGAP45Q92619 1136 aa9.77□□□□□ -0.85
GM2A-202ENST00000523004 SHISA4Q96DD7 197 aa9.77□□□□□ -0.85
GM2A-202ENST00000523004 DDX4Q9NQI0 724 aaKnown RBP9.77□□□□□ -0.85
GM2A-202ENST00000523004 PICK1Q9NRD5 415 aa9.77□□□□□ -0.85
GM2A-202ENST00000523004 ABCF2Q9UG63 623 aa9.77□□□□□ -0.85
GM2A-202ENST00000523004 SLC45A1Q9Y2W3 748 aa9.77□□□□□ -0.85
GM2A-202ENST00000523004 ZHX2Q9Y6X8 837 aa9.77□□□□□ -0.85
GM2A-202ENST00000523004 DOCK1Q14185 1865 aa9.76□□□□□ -0.85
GM2A-202ENST00000523004 GPR75-ASB3A0A0A6YYF3 556 aa9.76□□□□□ -0.85
GM2A-202ENST00000523004 A0A1B0GUL7 405 aa9.76□□□□□ -0.85
GM2A-202ENST00000523004 H0YGN5 161 aa9.76□□□□□ -0.85
GM2A-202ENST00000523004 CTNND1O60716 968 aaKnown RBP9.76□□□□□ -0.85
GM2A-202ENST00000523004 GJB1P08034 283 aa9.76□□□□□ -0.85
GM2A-202ENST00000523004 BTDP43251 543 aa9.76□□□□□ -0.85
GM2A-202ENST00000523004 GJA8P48165 433 aa9.76□□□□□ -0.85
GM2A-202ENST00000523004 RHBDL3P58872 404 aa9.76□□□□□ -0.85
GM2A-202ENST00000523004 TFCP2Q12800 502 aa9.76□□□□□ -0.85
GM2A-202ENST00000523004 UBE2Q1Q7Z7E8 422 aa9.76□□□□□ -0.85
GM2A-202ENST00000523004 ZSCAN29Q8IWY8 852 aaPredicted RBP9.76□□□□□ -0.85
GM2A-202ENST00000523004 NKX2-3Q8TAU0 364 aa9.76□□□□□ -0.85
GM2A-202ENST00000523004 ZNF384Q8TF68 577 aa9.76□□□□□ -0.85
GM2A-202ENST00000523004 XAGE2Q96GT9 111 aa9.76□□□□□ -0.85
GM2A-202ENST00000523004 COLQQ9Y215 455 aaPredicted RBP9.76□□□□□ -0.85
GM2A-202ENST00000523004 AKAP2Q9Y2D5 859 aa9.76□□□□□ -0.85
GM2A-202ENST00000523004 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.76□□□□□ -0.85
GM2A-202ENST00000523004 MROH7-TTC4A0A0A0MT08 1334 aa9.76□□□□□ -0.85
GM2A-202ENST00000523004 MYPNQ86TC9 1320 aa9.76□□□□□ -0.85
GM2A-202ENST00000523004 SZT2Q5T011 3432 aa9.75□□□□□ -0.85
GM2A-202ENST00000523004 SRGAP3O43295 1099 aa9.75□□□□□ -0.85
GM2A-202ENST00000523004 TBC1D12O60347 775 aa9.75□□□□□ -0.85
GM2A-202ENST00000523004 GNAI3P08754 354 aa9.75□□□□□ -0.85
GM2A-202ENST00000523004 SLURP2P0DP57 97 aa9.75□□□□□ -0.85
GM2A-202ENST00000523004 CCL5P13501 91 aa9.75□□□□□ -0.85
GM2A-202ENST00000523004 FCGRTP55899 365 aa9.75□□□□□ -0.85
GM2A-202ENST00000523004 MECOMQ03112 1051 aa9.75□□□□□ -0.85
GM2A-202ENST00000523004 PRKCZQ05513 592 aa9.75□□□□□ -0.85
GM2A-202ENST00000523004 MVPQ14764 893 aaKnown RBP9.75□□□□□ -0.85
GM2A-202ENST00000523004 ERICH6Q7L0X2 663 aa9.75□□□□□ -0.85
GM2A-202ENST00000523004 GABRQQ9UN88 632 aa9.75□□□□□ -0.85
GM2A-202ENST00000523004 MAP4K4O95819 1239 aaPredicted RBP9.74□□□□□ -0.85
GM2A-202ENST00000523004 NEFLP07196 543 aa9.74□□□□□ -0.85
GM2A-202ENST00000523004 UBXN2AP68543 259 aa9.74□□□□□ -0.85
GM2A-202ENST00000523004 HNRNPUQ00839 825 aaKnown RBP eCLIP9.74□□□□□ -0.85
GM2A-202ENST00000523004 PICALMQ13492 652 aa9.74□□□□□ -0.85
GM2A-202ENST00000523004 GADL1Q6ZQY3 521 aa9.74□□□□□ -0.85
GM2A-202ENST00000523004 SLAIN1Q8ND83 568 aa9.74□□□□□ -0.85
GM2A-202ENST00000523004 RNF208Q9H0X6 261 aa9.74□□□□□ -0.85
GM2A-202ENST00000523004 HMG20BQ9P0W2 317 aa9.74□□□□□ -0.85
GM2A-202ENST00000523004 BIN2Q9UBW5 565 aaPredicted RBP9.74□□□□□ -0.85
GM2A-202ENST00000523004 TRIM75PA6NK02 468 aa9.73□□□□□ -0.85
GM2A-202ENST00000523004 ADCY3O60266 1144 aa9.73□□□□□ -0.85
GM2A-202ENST00000523004 ARID4AP29374 1257 aaPredicted RBP9.73□□□□□ -0.85
GM2A-202ENST00000523004 FLT3LGP49771 235 aa9.73□□□□□ -0.85
GM2A-202ENST00000523004 IRF5Q13568 498 aa9.73□□□□□ -0.85
GM2A-202ENST00000523004 PI16Q6UXB8 463 aa9.73□□□□□ -0.85
GM2A-202ENST00000523004 SPATA5Q8NB90 893 aa9.73□□□□□ -0.85
GM2A-202ENST00000523004 PXYLP1Q8TE99 480 aa9.73□□□□□ -0.85
GM2A-202ENST00000523004 NSUN4Q96CB9 384 aaKnown RBP9.73□□□□□ -0.85
GM2A-202ENST00000523004 NEUROD6Q96NK8 337 aa9.73□□□□□ -0.85
GM2A-202ENST00000523004 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.73□□□□□ -0.85
GM2A-202ENST00000523004 AGTPBP1Q9UPW5 1226 aa9.73□□□□□ -0.85
GM2A-202ENST00000523004 COL2A1P02458 1487 aaPredicted RBP9.72□□□□□ -0.85
GM2A-202ENST00000523004 IPO8O15397 1037 aaKnown RBP9.72□□□□□ -0.85
GM2A-202ENST00000523004 LDHCP07864 332 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms