RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 CDAN1Q8IWY9 1227 aa14.75□□□□□ -0.05
PABPC1-219ENST00000522387 RASEFQ8IZ41 740 aa14.75□□□□□ -0.05
PABPC1-219ENST00000522387 RRAGCQ9HB90 399 aa14.75□□□□□ -0.05
PABPC1-219ENST00000522387 FLT1P17948 1338 aa14.74□□□□□ -0.05
PABPC1-219ENST00000522387 MYO1BO43795 1136 aa14.74□□□□□ -0.05
PABPC1-219ENST00000522387 CYP21A2P08686 494 aa14.74□□□□□ -0.05
PABPC1-219ENST00000522387 POTEIP0CG38 1075 aa14.74□□□□□ -0.05
PABPC1-219ENST00000522387 POTEJP0CG39 1038 aa14.74□□□□□ -0.05
PABPC1-219ENST00000522387 ZNF280AP59817 542 aaPredicted RBP14.74□□□□□ -0.05
PABPC1-219ENST00000522387 HDLBPQ00341 1268 aaKnown RBP14.74□□□□□ -0.05
PABPC1-219ENST00000522387 ANGEL2Q5VTE6 544 aaKnown RBP14.74□□□□□ -0.05
PABPC1-219ENST00000522387 RTN4Q9NQC3 1192 aaKnown RBP14.74□□□□□ -0.05
PABPC1-219ENST00000522387 ZNF70Q9UC06 446 aaPredicted RBP14.74□□□□□ -0.05
PABPC1-219ENST00000522387 PLCD1P51178 756 aa14.74□□□□□ -0.05
PABPC1-219ENST00000522387 NACAP1Q9BZK3 213 aa14.74□□□□□ -0.05
PABPC1-219ENST00000522387 HACL1Q9UJ83 578 aa14.74□□□□□ -0.05
PABPC1-219ENST00000522387 FAM196BA6NMK8 535 aa14.73□□□□□ -0.05
PABPC1-219ENST00000522387 POTECB2RU33 542 aa14.73□□□□□ -0.05
PABPC1-219ENST00000522387 GNAT2P19087 354 aa14.73□□□□□ -0.05
PABPC1-219ENST00000522387 CTR9Q6PD62 1173 aa14.73□□□□□ -0.05
PABPC1-219ENST00000522387 DSCC1Q9BVC3 393 aa14.73□□□□□ -0.05
PABPC1-219ENST00000522387 TMEM39BQ9GZU3 492 aa14.73□□□□□ -0.05
PABPC1-219ENST00000522387 NMRK2Q9NPI5 230 aa14.73□□□□□ -0.05
PABPC1-219ENST00000522387 GGA3Q9NZ52 723 aa14.73□□□□□ -0.05
PABPC1-219ENST00000522387 FAM198AQ9UFP1 575 aa14.73□□□□□ -0.05
PABPC1-219ENST00000522387 PRDM1O75626 825 aa14.72□□□□□ -0.05
PABPC1-219ENST00000522387 POLR3DP05423 398 aaPredicted RBP14.72□□□□□ -0.05
PABPC1-219ENST00000522387 PLCG2P16885 1265 aa14.72□□□□□ -0.05
PABPC1-219ENST00000522387 EPHX2P34913 555 aa14.72□□□□□ -0.05
PABPC1-219ENST00000522387 CREB3L3Q68CJ9 461 aa14.72□□□□□ -0.05
PABPC1-219ENST00000522387 TBC1D32Q96NH3 1257 aa14.72□□□□□ -0.05
PABPC1-219ENST00000522387 MRIQ9BWK5 157 aa14.72□□□□□ -0.05
PABPC1-219ENST00000522387 TOMM22Q9NS69 142 aa14.72□□□□□ -0.05
PABPC1-219ENST00000522387 CEP350Q5VT06 3117 aa14.72□□□□□ -0.05
PABPC1-219ENST00000522387 ZNF213O14771 459 aa14.72□□□□□ -0.05
PABPC1-219ENST00000522387 SLC27A2O14975 620 aa14.72□□□□□ -0.05
PABPC1-219ENST00000522387 CPA1P15085 419 aa14.72□□□□□ -0.05
PABPC1-219ENST00000522387 NECTIN1Q15223 517 aa14.72□□□□□ -0.05
PABPC1-219ENST00000522387 ADCK5Q3MIX3 580 aa14.72□□□□□ -0.05
PABPC1-219ENST00000522387 DYNLL2Q96FJ2 89 aa14.72□□□□□ -0.05
PABPC1-219ENST00000522387 TMOD2Q9NZR1 351 aa14.72□□□□□ -0.05
PABPC1-219ENST00000522387 FZD1Q9UP38 647 aa14.72□□□□□ -0.05
PABPC1-219ENST00000522387 DDTLA6NHG4 134 aaPredicted RBP14.71□□□□□ -0.05
PABPC1-219ENST00000522387 TICAM2Q86XR7 235 aa14.71□□□□□ -0.05
PABPC1-219ENST00000522387 SLC44A5Q8NCS7 719 aa14.71□□□□□ -0.05
PABPC1-219ENST00000522387 ADARB2Q9NS39 739 aaKnown RBP14.71□□□□□ -0.05
PABPC1-219ENST00000522387 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.71□□□□□ -0.05
PABPC1-219ENST00000522387 CLEC11AQ9Y240 323 aa14.71□□□□□ -0.05
PABPC1-219ENST00000522387 SPDYE2Q495Y8 402 aa14.71□□□□□ -0.05
PABPC1-219ENST00000522387 RRP12Q5JTH9 1297 aaKnown RBP14.71□□□□□ -0.05
PABPC1-219ENST00000522387 CHST3Q7LGC8 479 aa14.71□□□□□ -0.05
PABPC1-219ENST00000522387 SPRYD3Q8NCJ5 442 aa14.71□□□□□ -0.05
PABPC1-219ENST00000522387 NKX2-3Q8TAU0 364 aa14.71□□□□□ -0.05
PABPC1-219ENST00000522387 TCEANC2Q96MN5 208 aa14.71□□□□□ -0.05
PABPC1-219ENST00000522387 ATP8A2Q9NTI2 1148 aa14.71□□□□□ -0.05
PABPC1-219ENST00000522387 MKRN1Q9UHC7 482 aaKnown RBP14.71□□□□□ -0.05
PABPC1-219ENST00000522387 U3KPZ7 1027 aaPredicted RBP14.71□□□□□ -0.05
PABPC1-219ENST00000522387 POLR2AP24928 1970 aaKnown RBP14.71□□□□□ -0.06
PABPC1-219ENST00000522387 CDK5RAP2Q96SN8 1893 aa14.7□□□□□ -0.06
PABPC1-219ENST00000522387 HSPA4P34932 840 aa14.7□□□□□ -0.06
PABPC1-219ENST00000522387 IMMTQ16891 758 aaKnown RBP14.7□□□□□ -0.06
PABPC1-219ENST00000522387 MIGA2Q7L4E1 593 aa14.7□□□□□ -0.06
PABPC1-219ENST00000522387 UPF3BQ9BZI7 483 aaKnown RBP14.7□□□□□ -0.06
PABPC1-219ENST00000522387 OSBPL5Q9H0X9 879 aaPredicted RBP14.7□□□□□ -0.06
PABPC1-219ENST00000522387 PPARAQ07869 468 aa14.7□□□□□ -0.06
PABPC1-219ENST00000522387 RASA3Q14644 834 aa14.7□□□□□ -0.06
PABPC1-219ENST00000522387 SH3BP5LQ7L8J4 393 aa14.7□□□□□ -0.06
PABPC1-219ENST00000522387 TBC1D10CQ8IV04 446 aa14.7□□□□□ -0.06
PABPC1-219ENST00000522387 ZBED3Q96IU2 234 aaPredicted RBP14.7□□□□□ -0.06
PABPC1-219ENST00000522387 L3MBTL3Q96JM7 780 aaPredicted RBP14.7□□□□□ -0.06
PABPC1-219ENST00000522387 NBPF3Q9H094 633 aa14.7□□□□□ -0.06
PABPC1-219ENST00000522387 TAF1DQ9H5J8 278 aaPredicted RBP14.7□□□□□ -0.06
PABPC1-219ENST00000522387 SNX14Q9Y5W7 946 aa14.7□□□□□ -0.06
PABPC1-219ENST00000522387 TACC3Q9Y6A5 838 aa14.7□□□□□ -0.06
PABPC1-219ENST00000522387 MTMR14Q8NCE2 650 aa14.69□□□□□ -0.06
PABPC1-219ENST00000522387 MCCP23508 829 aa14.69□□□□□ -0.06
PABPC1-219ENST00000522387 PRKG1Q13976 671 aa14.69□□□□□ -0.06
PABPC1-219ENST00000522387 STOX1Q6ZVD7 989 aa14.69□□□□□ -0.06
PABPC1-219ENST00000522387 CSRNP1Q96S65 589 aa14.69□□□□□ -0.06
PABPC1-219ENST00000522387 LARP6Q9BRS8 491 aaKnown RBP14.69□□□□□ -0.06
PABPC1-219ENST00000522387 DEFB129Q9H1M3 183 aa14.69□□□□□ -0.06
PABPC1-219ENST00000522387 SLKQ9H2G2 1235 aaPredicted RBP14.69□□□□□ -0.06
PABPC1-219ENST00000522387 BRPF3Q9ULD4 1205 aa14.69□□□□□ -0.06
PABPC1-219ENST00000522387 ZC3H4Q9UPT8 1303 aaKnown RBP14.69□□□□□ -0.06
PABPC1-219ENST00000522387 ZKSCAN1P17029 563 aaPredicted RBP14.68□□□□□ -0.06
PABPC1-219ENST00000522387 JAKMIP1Q96N16 626 aaKnown RBP14.68□□□□□ -0.06
PABPC1-219ENST00000522387 IDI2Q9BXS1 227 aa14.68□□□□□ -0.06
PABPC1-219ENST00000522387 CTNNA3Q9UI47 895 aa14.68□□□□□ -0.06
PABPC1-219ENST00000522387 ECM29Q5VYK3 1845 aa14.68□□□□□ -0.06
PABPC1-219ENST00000522387 CNTNAP1P78357 1384 aa14.68□□□□□ -0.06
PABPC1-219ENST00000522387 IQCA1LA6NCM1 817 aa14.67□□□□□ -0.06
PABPC1-219ENST00000522387 ADM5C9JUS6 153 aa14.67□□□□□ -0.06
PABPC1-219ENST00000522387 FMR1Q06787 632 aaKnown RBP eCLIP14.67□□□□□ -0.067e-17■■■■■ 61.9
PABPC1-219ENST00000522387 RNF20Q5VTR2 975 aa14.67□□□□□ -0.06
PABPC1-219ENST00000522387 TMED8Q6PL24 325 aaPredicted RBP14.67□□□□□ -0.06
PABPC1-219ENST00000522387 LRRC2Q9BYS8 371 aa14.67□□□□□ -0.06
PABPC1-219ENST00000522387 E7EWF7 191 aa14.67□□□□□ -0.06
PABPC1-219ENST00000522387 CASTP20810 708 aaKnown RBP14.67□□□□□ -0.06
PABPC1-219ENST00000522387 C12orf60Q5U649 245 aa14.67□□□□□ -0.06
PABPC1-219ENST00000522387 MAP1SQ66K74 1059 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms