RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 PDHXO00330 501 aa11.52□□□□□ -0.57
TRAPPC9-212ENST00000521944 WDHD1O75717 1129 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC9-212ENST00000521944 IL1R1P14778 569 aa11.52□□□□□ -0.57
TRAPPC9-212ENST00000521944 PLA2G5P39877 138 aa11.52□□□□□ -0.57
TRAPPC9-212ENST00000521944 FLT3LGP49771 235 aa11.52□□□□□ -0.57
TRAPPC9-212ENST00000521944 PPIL2Q13356 520 aa11.52□□□□□ -0.57
TRAPPC9-212ENST00000521944 ANKRD23Q86SG2 305 aa11.52□□□□□ -0.57
TRAPPC9-212ENST00000521944 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC9-212ENST00000521944 CWC25Q9NXE8 425 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC9-212ENST00000521944 NEFMP07197 916 aa11.51□□□□□ -0.57
TRAPPC9-212ENST00000521944 PBX2P40425 430 aa11.51□□□□□ -0.57
TRAPPC9-212ENST00000521944 RBM5P52756 815 aaKnown RBP eCLIP11.51□□□□□ -0.57
TRAPPC9-212ENST00000521944 FKBP1AP62942 108 aaKnown RBP11.51□□□□□ -0.57
TRAPPC9-212ENST00000521944 C15orf52Q6ZUT6 534 aaKnown RBP11.51□□□□□ -0.57
TRAPPC9-212ENST00000521944 ZNF454Q8N9F8 522 aa11.51□□□□□ -0.57
TRAPPC9-212ENST00000521944 PXYLP1Q8TE99 480 aa11.51□□□□□ -0.57
TRAPPC9-212ENST00000521944 CDX2Q99626 313 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC9-212ENST00000521944 IGKV5-2P06315 115 aa11.5□□□□□ -0.57
TRAPPC9-212ENST00000521944 HOXB7P09629 217 aa11.5□□□□□ -0.57
TRAPPC9-212ENST00000521944 CYP2C8P10632 490 aa11.5□□□□□ -0.57
TRAPPC9-212ENST00000521944 FCGRTP55899 365 aa11.5□□□□□ -0.57
TRAPPC9-212ENST00000521944 TNFAIP1Q13829 316 aa11.5□□□□□ -0.57
TRAPPC9-212ENST00000521944 GPAT2Q6NUI2 795 aa11.5□□□□□ -0.57
TRAPPC9-212ENST00000521944 DZIP1LQ8IYY4 767 aaKnown RBP11.5□□□□□ -0.57
TRAPPC9-212ENST00000521944 MAFAQ8NHW3 353 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC9-212ENST00000521944 MGAMO43451 1857 aa11.5□□□□□ -0.57
TRAPPC9-212ENST00000521944 POTEB3A0JP26 581 aa11.49□□□□□ -0.57
TRAPPC9-212ENST00000521944 TAF5LO75529 589 aa11.49□□□□□ -0.57
TRAPPC9-212ENST00000521944 CAPN2P17655 700 aa11.49□□□□□ -0.57
TRAPPC9-212ENST00000521944 TMPOP42166 694 aaKnown RBP11.49□□□□□ -0.57
TRAPPC9-212ENST00000521944 FOSBP53539 338 aa11.49□□□□□ -0.57
TRAPPC9-212ENST00000521944 CHRNDQ07001 517 aa11.49□□□□□ -0.57
TRAPPC9-212ENST00000521944 IRF5Q13568 498 aa11.49□□□□□ -0.57
TRAPPC9-212ENST00000521944 GRIK5Q16478 980 aa11.49□□□□□ -0.57
TRAPPC9-212ENST00000521944 DUSP27Q5VZP5 1158 aa11.49□□□□□ -0.57
TRAPPC9-212ENST00000521944 POTEBQ6S5H4 581 aa11.49□□□□□ -0.57
TRAPPC9-212ENST00000521944 WRNIP1Q96S55 665 aa11.49□□□□□ -0.57
TRAPPC9-212ENST00000521944 METTL22Q9BUU2 404 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC9-212ENST00000521944 ANKRD2Q9GZV1 360 aa11.49□□□□□ -0.57
TRAPPC9-212ENST00000521944 KCNH4Q9UQ05 1017 aa11.49□□□□□ -0.57
TRAPPC9-212ENST00000521944 ARAP2Q8WZ64 1704 aa11.49□□□□□ -0.57
TRAPPC9-212ENST00000521944 INPP5BP32019 993 aa11.48□□□□□ -0.57
TRAPPC9-212ENST00000521944 CACNB3P54284 484 aa11.48□□□□□ -0.57
TRAPPC9-212ENST00000521944 PPATQ06203 517 aa11.48□□□□□ -0.57
TRAPPC9-212ENST00000521944 SERPINA10Q9UK55 444 aa11.48□□□□□ -0.57
TRAPPC9-212ENST00000521944 PFASO15067 1338 aa11.48□□□□□ -0.57
TRAPPC9-212ENST00000521944 FAM205AQ6ZU69 1335 aa11.47□□□□□ -0.57
TRAPPC9-212ENST00000521944 CLSPNQ9HAW4 1339 aa11.47□□□□□ -0.57
TRAPPC9-212ENST00000521944 MAPK8IP3Q9UPT6 1336 aa11.47□□□□□ -0.57
TRAPPC9-212ENST00000521944 ITGA6P23229 1130 aa11.47□□□□□ -0.57
TRAPPC9-212ENST00000521944 MDM2Q00987 491 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC9-212ENST00000521944 ANKLE1Q8NAG6 615 aa11.47□□□□□ -0.57
TRAPPC9-212ENST00000521944 EPAS1Q99814 870 aa11.47□□□□□ -0.57
TRAPPC9-212ENST00000521944 NBPF3Q9H094 633 aa11.47□□□□□ -0.57
TRAPPC9-212ENST00000521944 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.47□□□□□ -0.57
TRAPPC9-212ENST00000521944 SEMA6BQ9H3T3 888 aa11.47□□□□□ -0.57
TRAPPC9-212ENST00000521944 TNFRSF10AO00220 468 aa11.46□□□□□ -0.57
TRAPPC9-212ENST00000521944 IGHMBP2P38935 993 aaKnown RBP11.46□□□□□ -0.57
TRAPPC9-212ENST00000521944 TRIM32Q13049 653 aa11.46□□□□□ -0.57
TRAPPC9-212ENST00000521944 TTF2Q9UNY4 1162 aaKnown RBP11.46□□□□□ -0.57
TRAPPC9-212ENST00000521944 LAS1LQ9Y4W2 734 aaKnown RBP11.46□□□□□ -0.57
TRAPPC9-212ENST00000521944 MYH3P11055 1940 aa11.46□□□□□ -0.58
TRAPPC9-212ENST00000521944 H7C1W4 665 aa11.45□□□□□ -0.58
TRAPPC9-212ENST00000521944 CSF1RP07333 972 aa11.45□□□□□ -0.58
TRAPPC9-212ENST00000521944 CRKP46108 304 aa11.45□□□□□ -0.58
TRAPPC9-212ENST00000521944 KCNJ4P48050 445 aa11.45□□□□□ -0.58
TRAPPC9-212ENST00000521944 MFSD14BQ5SR56 506 aa11.45□□□□□ -0.58
TRAPPC9-212ENST00000521944 TYW1BQ6NUM6 668 aa11.45□□□□□ -0.58
TRAPPC9-212ENST00000521944 MIGA2Q7L4E1 593 aa11.45□□□□□ -0.58
TRAPPC9-212ENST00000521944 SYMPKQ92797 1274 aaKnown RBP11.45□□□□□ -0.58
TRAPPC9-212ENST00000521944 ZDHHC16Q969W1 377 aa11.45□□□□□ -0.58
TRAPPC9-212ENST00000521944 FAM122AQ96E09 287 aa11.45□□□□□ -0.58
TRAPPC9-212ENST00000521944 TTYH1Q9H313 450 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC9-212ENST00000521944 C11orf49Q9H6J7 331 aa11.45□□□□□ -0.58
TRAPPC9-212ENST00000521944 OGDHLQ9ULD0 1010 aa11.45□□□□□ -0.58
TRAPPC9-212ENST00000521944 DDX60LQ5H9U9 1706 aaKnown RBP11.44□□□□□ -0.58
TRAPPC9-212ENST00000521944 COL6A1P12109 1028 aa11.44□□□□□ -0.58
TRAPPC9-212ENST00000521944 CASP7P55210 303 aa11.44□□□□□ -0.58
TRAPPC9-212ENST00000521944 CWF19L2Q2TBE0 894 aaKnown RBP11.44□□□□□ -0.58
TRAPPC9-212ENST00000521944 ZNF697Q5TEC3 545 aa11.44□□□□□ -0.58
TRAPPC9-212ENST00000521944 TDRD7Q8NHU6 1098 aaKnown RBP11.44□□□□□ -0.58
TRAPPC9-212ENST00000521944 MYLIPQ8WY64 445 aa11.44□□□□□ -0.58
TRAPPC9-212ENST00000521944 PARK7Q99497 189 aaKnown RBP11.44□□□□□ -0.58
TRAPPC9-212ENST00000521944 MPHOSPH8Q99549 860 aa11.44□□□□□ -0.58
TRAPPC9-212ENST00000521944 ZNF112Q9UJU3 913 aa11.44□□□□□ -0.58
TRAPPC9-212ENST00000521944 MAP3K2Q9Y2U5 619 aa11.44□□□□□ -0.58
TRAPPC9-212ENST00000521944 TNNI2P48788 182 aa11.43□□□□□ -0.58
TRAPPC9-212ENST00000521944 LRRC26Q2I0M4 334 aa11.43□□□□□ -0.58
TRAPPC9-212ENST00000521944 ZNF804AQ7Z570 1209 aa11.43□□□□□ -0.58
TRAPPC9-212ENST00000521944 USP38Q8NB14 1042 aa11.43□□□□□ -0.58
TRAPPC9-212ENST00000521944 PLA2G12BQ9BX93 195 aa11.43□□□□□ -0.58
TRAPPC9-212ENST00000521944 ARHGAP33O14559 1287 aa11.42□□□□□ -0.58
TRAPPC9-212ENST00000521944 TNPO2O14787 897 aaKnown RBP11.42□□□□□ -0.58
TRAPPC9-212ENST00000521944 MAP3K12Q12852 859 aa11.42□□□□□ -0.58
TRAPPC9-212ENST00000521944 NEUROD2Q15784 382 aa11.42□□□□□ -0.58
TRAPPC9-212ENST00000521944 APOBEC3HQ6NTF7 200 aaKnown RBP11.42□□□□□ -0.58
TRAPPC9-212ENST00000521944 UBE3BQ7Z3V4 1068 aa11.42□□□□□ -0.58
TRAPPC9-212ENST00000521944 PNNQ9H307 717 aaKnown RBP11.42□□□□□ -0.58
TRAPPC9-212ENST00000521944 MBIPQ9NS73 344 aa11.42□□□□□ -0.58
TRAPPC9-212ENST00000521944 GJD2Q9UKL4 321 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms