RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 ZNF569Q5MCW4 686 aa10.96□□□□□ -0.66
CTNNA1-230ENST00000521724 CTAGE6Q86UF2 777 aa10.96□□□□□ -0.66
CTNNA1-230ENST00000521724 CTAGE4Q8IX94 777 aa10.96□□□□□ -0.66
CTNNA1-230ENST00000521724 SUCLG2Q96I99 432 aa10.96□□□□□ -0.66
CTNNA1-230ENST00000521724 TUBB2BQ9BVA1 445 aa10.96□□□□□ -0.66
CTNNA1-230ENST00000521724 C19orf44Q9H6X5 657 aa10.96□□□□□ -0.66
CTNNA1-230ENST00000521724 CTAGE9A4FU28 777 aa10.95□□□□□ -0.66
CTNNA1-230ENST00000521724 SOWAHDA6NJG2 315 aa10.95□□□□□ -0.66
CTNNA1-230ENST00000521724 TUBBP07437 444 aa10.95□□□□□ -0.66
CTNNA1-230ENST00000521724 FDPSP14324 419 aaKnown RBP10.95□□□□□ -0.66
CTNNA1-230ENST00000521724 AIMP1Q12904 312 aaKnown RBP10.95□□□□□ -0.66
CTNNA1-230ENST00000521724 MCMDC2Q4G0Z9 681 aa10.95□□□□□ -0.66
CTNNA1-230ENST00000521724 ANO1Q5XXA6 986 aa10.95□□□□□ -0.66
CTNNA1-230ENST00000521724 TTLL5Q6EMB2 1281 aa10.95□□□□□ -0.66
CTNNA1-230ENST00000521724 NDUFB9Q9Y6M9 179 aa10.95□□□□□ -0.66
CTNNA1-230ENST00000521724 LAMA4Q16363 1823 aa10.95□□□□□ -0.66
CTNNA1-230ENST00000521724 MROH7-TTC4A0A0A0MT08 1334 aa10.95□□□□□ -0.66
CTNNA1-230ENST00000521724 CHST3Q7LGC8 479 aa10.95□□□□□ -0.66
CTNNA1-230ENST00000521724 BRAPQ7Z569 592 aa10.95□□□□□ -0.66
CTNNA1-230ENST00000521724 ZNF274Q96GC6 653 aaPredicted RBP10.95□□□□□ -0.66
CTNNA1-230ENST00000521724 PHF8Q9UPP1 1060 aa10.95□□□□□ -0.66
CTNNA1-230ENST00000521724 ARHGAP23Q9P227 1491 aa10.94□□□□□ -0.66
CTNNA1-230ENST00000521724 TFRCP02786 760 aaKnown RBP10.94□□□□□ -0.66
CTNNA1-230ENST00000521724 USP8P40818 1118 aa10.94□□□□□ -0.66
CTNNA1-230ENST00000521724 PIP4K2BP78356 416 aa10.94□□□□□ -0.66
CTNNA1-230ENST00000521724 KAT2BQ92831 832 aa10.94□□□□□ -0.66
CTNNA1-230ENST00000521724 SMARCC1Q92922 1105 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-230ENST00000521724 DONSONQ9NYP3 566 aa10.94□□□□□ -0.66
CTNNA1-230ENST00000521724 PXDNQ92626 1479 aa10.94□□□□□ -0.66
CTNNA1-230ENST00000521724 EXOC5O00471 708 aa10.94□□□□□ -0.66
CTNNA1-230ENST00000521724 RNMTO43148 476 aaKnown RBP10.94□□□□□ -0.66
CTNNA1-230ENST00000521724 PLEKHO1Q53GL0 409 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-230ENST00000521724 EP400NLQ6ZTU2 488 aa10.94□□□□□ -0.66
CTNNA1-230ENST00000521724 CADPS2Q86UW7 1296 aa10.94□□□□□ -0.66
CTNNA1-230ENST00000521724 CTCFLQ8NI51 663 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-230ENST00000521724 AGXT2Q9BYV1 514 aa10.94□□□□□ -0.66
CTNNA1-230ENST00000521724 ADGRG1Q9Y653 693 aa10.94□□□□□ -0.66
CTNNA1-230ENST00000521724 ZNF609O15014 1411 aa10.94□□□□□ -0.66
CTNNA1-230ENST00000521724 EBAG9O00559 213 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 EXOSC10Q01780 885 aaKnown RBP10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 ARHGEF25Q86VW2 580 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 ZNF622Q969S3 477 aaKnown RBP eCLIP10.93□□□□□ -0.662e-10■□□□□ 9.9
CTNNA1-230ENST00000521724 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 DBF4Q9UBU7 674 aaPredicted RBP10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 NFE2L3Q9Y4A8 694 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 LTN1O94822 1766 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 NCAPD2Q15021 1401 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 A0A0U1RQJ8 604 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 CCDC196A0A1B0GTZ2 297 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 AKR1B15C9JRZ8 316 aaPredicted RBP10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 SYF2O95926 243 aaKnown RBP10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 HNRNPH1P31943 449 aaKnown RBP10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 CCT5P48643 541 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 KSR2Q6VAB6 950 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 THEMISQ8N1K5 641 aaPredicted RBP10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 IGSF22Q8N9C0 903 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 ATRIPQ8WXE1 791 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 RAI14Q9P0K7 980 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 SUFUQ9UMX1 484 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 PCDHA5Q9Y5H7 936 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 MED1Q15648 1581 aaPredicted RBP10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 SLIT1O75093 1534 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 PDE4BQ07343 736 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 SLC39A14Q15043 492 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 AKAP4Q5JQC9 854 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 EPHA10Q5JZY3 1008 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 FBXW10Q5XX13 1052 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 CCDC125Q86Z20 511 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 CLIC6Q96NY7 704 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 VIPAS39Q9H9C1 493 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 GJB4Q9NTQ9 266 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 FAM169AQ9Y6X4 670 aa10.93□□□□□ -0.66
CTNNA1-230ENST00000521724 GRM8O00222 908 aa10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 KIF1CO43896 1103 aaKnown RBP10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 PRPF6O94906 941 aaKnown RBP10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 HOXB7P09629 217 aa10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 ATP5JP18859 108 aa10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 CDC27P30260 824 aa10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 PIP4K2AP48426 406 aaPredicted RBP10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 AARSP49588 968 aaKnown RBP eCLIP10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 AKAP17AQ02040 695 aaKnown RBP10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 SLC39A6Q13433 755 aa10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 WHAMMP3Q1A5X7 153 aa10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 CCDC102BQ68D86 513 aa10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 WDR93Q6P2C0 686 aa10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 RAD9BQ6WBX8 426 aa10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 SLC35F6Q8N357 371 aa10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 NOA1Q8NC60 698 aaKnown RBP10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 CCDC148Q8NFR7 591 aa10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 CPLX3Q8WVH0 158 aa10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 PANX2Q96RD6 677 aa10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 AXIN2Q9Y2T1 843 aa10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 KDM3BQ7LBC6 1761 aa10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 FER1L4A9Z1Z3 1794 aa10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 E7EWF7 191 aa10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 IGKV5-2P06315 115 aa10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 PDIA6Q15084 440 aa10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 ESCO1Q5FWF5 840 aa10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 METTL16Q86W50 562 aaKnown RBP10.92□□□□□ -0.66
CTNNA1-230ENST00000521724 FOXP4Q8IVH2 680 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms