RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 SLC10A4Q96EP9 437 aa14.08□□□□□ -0.16
CSMD1-210ENST00000521646 TDRD3Q9H7E2 651 aaKnown RBP14.08□□□□□ -0.16
CSMD1-210ENST00000521646 NPDC1Q9NQX5 325 aaPredicted RBP14.08□□□□□ -0.16
CSMD1-210ENST00000521646 ZNF70Q9UC06 446 aaPredicted RBP14.08□□□□□ -0.16
CSMD1-210ENST00000521646 RBBP6Q7Z6E9 1792 aaKnown RBP14.08□□□□□ -0.16
CSMD1-210ENST00000521646 RANBP2P49792 3224 aaKnown RBP14.07□□□□□ -0.16
CSMD1-210ENST00000521646 CACNB3P54284 484 aa14.07□□□□□ -0.16
CSMD1-210ENST00000521646 ANKRD44Q8N8A2 993 aa14.07□□□□□ -0.16
CSMD1-210ENST00000521646 TMEM39BQ9GZU3 492 aa14.07□□□□□ -0.16
CSMD1-210ENST00000521646 IQSEC3Q9UPP2 1182 aaPredicted RBP14.07□□□□□ -0.16
CSMD1-210ENST00000521646 RIPOR2Q9Y4F9 1068 aa14.07□□□□□ -0.16
CSMD1-210ENST00000521646 TRIM17Q9Y577 477 aa14.07□□□□□ -0.16
CSMD1-210ENST00000521646 TESPA1A2RU30 521 aaPredicted RBP14.06□□□□□ -0.16
CSMD1-210ENST00000521646 SOWAHBA6NEL2 793 aa14.06□□□□□ -0.16
CSMD1-210ENST00000521646 MANSC4A6NHS7 340 aaPredicted RBP14.06□□□□□ -0.16
CSMD1-210ENST00000521646 ZBTB48P10074 688 aaPredicted RBP14.06□□□□□ -0.16
CSMD1-210ENST00000521646 MMP14P50281 582 aa14.06□□□□□ -0.16
CSMD1-210ENST00000521646 LRRC24Q50LG9 513 aa14.06□□□□□ -0.16
CSMD1-210ENST00000521646 MFSD14BQ5SR56 506 aa14.06□□□□□ -0.16
CSMD1-210ENST00000521646 LDHAL6AQ6ZMR3 332 aa14.06□□□□□ -0.16
CSMD1-210ENST00000521646 ZNF804AQ7Z570 1209 aa14.06□□□□□ -0.16
CSMD1-210ENST00000521646 WDR63Q8IWG1 891 aa14.06□□□□□ -0.16
CSMD1-210ENST00000521646 VGLL2Q8N8G2 317 aa14.06□□□□□ -0.16
CSMD1-210ENST00000521646 KLHDC4Q8TBB5 520 aa14.06□□□□□ -0.16
CSMD1-210ENST00000521646 BRI3BPQ8WY22 251 aa14.06□□□□□ -0.16
CSMD1-210ENST00000521646 ELP3Q9H9T3 547 aa14.06□□□□□ -0.16
CSMD1-210ENST00000521646 MRS2Q9HD23 443 aa14.06□□□□□ -0.16
CSMD1-210ENST00000521646 CHMP4AQ9BY43 222 aa14.05□□□□□ -0.16
CSMD1-210ENST00000521646 TTF2Q9UNY4 1162 aaKnown RBP14.05□□□□□ -0.16
CSMD1-210ENST00000521646 PPP2R3BQ9Y5P8 575 aa14.05□□□□□ -0.16
CSMD1-210ENST00000521646 ZNF521Q96K83 1311 aa14.05□□□□□ -0.16
CSMD1-210ENST00000521646 TCP10L2B9ZVM9 353 aa14.04□□□□□ -0.16
CSMD1-210ENST00000521646 VGLL4Q14135 290 aa14.04□□□□□ -0.16
CSMD1-210ENST00000521646 SMYD5Q6GMV2 418 aa14.04□□□□□ -0.16
CSMD1-210ENST00000521646 PADI6Q6TGC4 694 aa14.04□□□□□ -0.16
CSMD1-210ENST00000521646 NUDT18Q6ZVK8 323 aa14.04□□□□□ -0.16
CSMD1-210ENST00000521646 DZIP1LQ8IYY4 767 aaKnown RBP14.04□□□□□ -0.16
CSMD1-210ENST00000521646 FAM43AQ8N2R8 423 aa14.04□□□□□ -0.16
CSMD1-210ENST00000521646 OPTNQ96CV9 577 aa14.04□□□□□ -0.16
CSMD1-210ENST00000521646 BICC1Q9H694 974 aaKnown RBP14.04□□□□□ -0.16
CSMD1-210ENST00000521646 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.04□□□□□ -0.16
CSMD1-210ENST00000521646 PTPN22Q9Y2R2 807 aa14.04□□□□□ -0.16
CSMD1-210ENST00000521646 UTYO14607 1347 aa14.04□□□□□ -0.16
CSMD1-210ENST00000521646 PPP1R12BO60237 982 aaPredicted RBP14.03□□□□□ -0.16
CSMD1-210ENST00000521646 EN2P19622 333 aaPredicted RBP14.03□□□□□ -0.16
CSMD1-210ENST00000521646 CRKP46108 304 aa14.03□□□□□ -0.16
CSMD1-210ENST00000521646 RBM5P52756 815 aaKnown RBP eCLIP14.03□□□□□ -0.16
CSMD1-210ENST00000521646 CCDC57Q2TAC2 916 aa14.03□□□□□ -0.16
CSMD1-210ENST00000521646 SLC4A10Q6U841 1118 aa14.03□□□□□ -0.16
CSMD1-210ENST00000521646 FBXO33Q7Z6M2 555 aa14.03□□□□□ -0.16
CSMD1-210ENST00000521646 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.03□□□□□ -0.16
CSMD1-210ENST00000521646 LRCH3Q96II8 777 aa14.03□□□□□ -0.16
CSMD1-210ENST00000521646 ARHGAP39Q9C0H5 1083 aa14.03□□□□□ -0.16
CSMD1-210ENST00000521646 CNNM1Q9NRU3 951 aa14.03□□□□□ -0.16
CSMD1-210ENST00000521646 RBM27Q9P2N5 1060 aaKnown RBP14.03□□□□□ -0.16
CSMD1-210ENST00000521646 ALDH1A1P00352 501 aa14.02□□□□□ -0.17
CSMD1-210ENST00000521646 CTGFP29279 349 aa14.02□□□□□ -0.17
CSMD1-210ENST00000521646 HIBADHP31937 336 aaKnown RBP14.02□□□□□ -0.17
CSMD1-210ENST00000521646 UBE4AQ14139 1066 aa14.02□□□□□ -0.17
CSMD1-210ENST00000521646 RABL6Q3YEC7 729 aaPredicted RBP14.02□□□□□ -0.17
CSMD1-210ENST00000521646 SERPINA10Q9UK55 444 aa14.02□□□□□ -0.17
CSMD1-210ENST00000521646 SNCAIPQ9Y6H5 919 aa14.02□□□□□ -0.17
CSMD1-210ENST00000521646 C3orf80F5H4A9 247 aa14.01□□□□□ -0.17
CSMD1-210ENST00000521646 ALDH1L1O75891 902 aa14.01□□□□□ -0.17
CSMD1-210ENST00000521646 SUPT20HL1Q3ZLR7 823 aa14.01□□□□□ -0.17
CSMD1-210ENST00000521646 ANKRD13AQ8IZ07 590 aa14.01□□□□□ -0.17
CSMD1-210ENST00000521646 ARMC5Q96C12 935 aa14.01□□□□□ -0.17
CSMD1-210ENST00000521646 IREB2P48200 963 aaKnown RBP14□□□□□ -0.17
CSMD1-210ENST00000521646 RFX5P48382 616 aaPredicted RBP14□□□□□ -0.17
CSMD1-210ENST00000521646 INHBEP58166 350 aa14□□□□□ -0.17
CSMD1-210ENST00000521646 CHAF1AQ13111 956 aaPredicted RBP14□□□□□ -0.17
CSMD1-210ENST00000521646 APOBEC3HQ6NTF7 200 aaKnown RBP14□□□□□ -0.17
CSMD1-210ENST00000521646 SRCIN1Q9C0H9 1055 aa14□□□□□ -0.17
CSMD1-210ENST00000521646 C9orf78Q9NZ63 289 aaPredicted RBP14□□□□□ -0.17
CSMD1-210ENST00000521646 PTCH2Q9Y6C5 1203 aa14□□□□□ -0.17
CSMD1-210ENST00000521646 CEP290O15078 2479 aa13.99□□□□□ -0.17
CSMD1-210ENST00000521646 UNCXA6NJT0 531 aa13.99□□□□□ -0.17
CSMD1-210ENST00000521646 MYO1BO43795 1136 aa13.99□□□□□ -0.17
CSMD1-210ENST00000521646 SLURP2P0DP57 97 aa13.99□□□□□ -0.17
CSMD1-210ENST00000521646 FGFR2P21802 821 aa13.99□□□□□ -0.17
CSMD1-210ENST00000521646 PTGDRQ13258 359 aa13.99□□□□□ -0.17
CSMD1-210ENST00000521646 TAF7LQ5H9L4 462 aa13.99□□□□□ -0.17
CSMD1-210ENST00000521646 ZKSCAN4Q969J2 545 aaPredicted RBP13.99□□□□□ -0.17
CSMD1-210ENST00000521646 ZNF333Q96JL9 665 aa13.99□□□□□ -0.17
CSMD1-210ENST00000521646 CCL15-CCL14A0A0B4J2E2 113 aa13.98□□□□□ -0.17
CSMD1-210ENST00000521646 SP3Q02447 781 aa13.98□□□□□ -0.17
CSMD1-210ENST00000521646 CCL15Q16663 113 aa13.98□□□□□ -0.17
CSMD1-210ENST00000521646 USP44Q9H0E7 712 aa13.98□□□□□ -0.17
CSMD1-210ENST00000521646 EFCC1Q9HA90 598 aa13.98□□□□□ -0.17
CSMD1-210ENST00000521646 SPDYE5A6NIY4 337 aa13.97□□□□□ -0.17
CSMD1-210ENST00000521646 BTBD19C9JJ37 291 aa13.97□□□□□ -0.17
CSMD1-210ENST00000521646 MOGSQ13724 837 aa13.97□□□□□ -0.17
CSMD1-210ENST00000521646 TTC13Q8NBP0 860 aa13.97□□□□□ -0.17
CSMD1-210ENST00000521646 ERO1AQ96HE7 468 aa13.97□□□□□ -0.17
CSMD1-210ENST00000521646 TSR3Q9UJK0 312 aaKnown RBP13.97□□□□□ -0.17
CSMD1-210ENST00000521646 MROH5Q6ZUA9 1318 aa13.96□□□□□ -0.17
CSMD1-210ENST00000521646 LAMA3Q16787 3333 aa13.96□□□□□ -0.17
CSMD1-210ENST00000521646 IRF6O14896 467 aa13.96□□□□□ -0.17
CSMD1-210ENST00000521646 PDE8BO95263 885 aa13.96□□□□□ -0.17
CSMD1-210ENST00000521646 MYCP01106 439 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms