RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 KIAA0825Q8IV33 1275 aa8.36□□□□□ -1.07
SKP1-208ENST00000521216 SUPT16HQ9Y5B9 1047 aaKnown RBP8.36□□□□□ -1.07
SKP1-208ENST00000521216 TLR3O15455 904 aaKnown RBP8.35□□□□□ -1.07
SKP1-208ENST00000521216 ASPAP45381 313 aa8.35□□□□□ -1.07
SKP1-208ENST00000521216 CDK8P49336 464 aa8.35□□□□□ -1.07
SKP1-208ENST00000521216 HDXQ7Z353 690 aa8.35□□□□□ -1.07
SKP1-208ENST00000521216 ACBD3Q9H3P7 528 aa8.35□□□□□ -1.07
SKP1-208ENST00000521216 IGSF5Q9NSI5 407 aa8.35□□□□□ -1.07
SKP1-208ENST00000521216 CACNA2D2Q9NY47 1150 aa8.35□□□□□ -1.07
SKP1-208ENST00000521216 PRAMEF27A3QJZ7 478 aa8.34□□□□□ -1.07
SKP1-208ENST00000521216 TMPRSS2O15393 492 aa8.34□□□□□ -1.07
SKP1-208ENST00000521216 TIAF1O95411 115 aa8.34□□□□□ -1.07
SKP1-208ENST00000521216 RAD51AP2Q09MP3 1159 aa8.34□□□□□ -1.07
SKP1-208ENST00000521216 ZC3H12AQ5D1E8 599 aaKnown RBP8.34□□□□□ -1.07
SKP1-208ENST00000521216 WIPI1Q5MNZ9 446 aaPredicted RBP8.34□□□□□ -1.07
SKP1-208ENST00000521216 LRFN4Q6PJG9 635 aa8.34□□□□□ -1.07
SKP1-208ENST00000521216 GATAD2BQ8WXI9 593 aa8.34□□□□□ -1.07
SKP1-208ENST00000521216 UTP4Q969X6 686 aaKnown RBP8.34□□□□□ -1.07
SKP1-208ENST00000521216 TP53INP1Q96A56 240 aa8.34□□□□□ -1.07
SKP1-208ENST00000521216 PLPPR2Q96GM1 343 aa8.34□□□□□ -1.07
SKP1-208ENST00000521216 TGIF2Q9GZN2 237 aa8.34□□□□□ -1.07
SKP1-208ENST00000521216 PIDD1Q9HB75 910 aa8.34□□□□□ -1.07
SKP1-208ENST00000521216 ACTL7BQ9Y614 415 aa8.34□□□□□ -1.07
SKP1-208ENST00000521216 RNGTTO60942 597 aaKnown RBP8.33□□□□□ -1.08
SKP1-208ENST00000521216 RAB6AP20340 208 aa8.33□□□□□ -1.08
SKP1-208ENST00000521216 GARTP22102 1010 aa8.33□□□□□ -1.08
SKP1-208ENST00000521216 RXRBP28702 533 aa8.33□□□□□ -1.08
SKP1-208ENST00000521216 PPM1JQ5JR12 505 aa8.33□□□□□ -1.08
SKP1-208ENST00000521216 Q6ZS46 218 aa8.33□□□□□ -1.08
SKP1-208ENST00000521216 CCDC84Q86UT8 332 aaPredicted RBP8.33□□□□□ -1.08
SKP1-208ENST00000521216 DZIP1LQ8IYY4 767 aaKnown RBP8.33□□□□□ -1.08
SKP1-208ENST00000521216 C2CD4AQ8NCU7 369 aaPredicted RBP8.33□□□□□ -1.08
SKP1-208ENST00000521216 FBXO27Q8NI29 283 aa8.33□□□□□ -1.08
SKP1-208ENST00000521216 FANCD2OSQ96PS1 177 aa8.33□□□□□ -1.08
SKP1-208ENST00000521216 KCNF1Q9H3M0 494 aa8.33□□□□□ -1.08
SKP1-208ENST00000521216 ATXN3LQ9H3M9 355 aa8.33□□□□□ -1.08
SKP1-208ENST00000521216 SSU72Q9NP77 194 aaKnown RBP8.33□□□□□ -1.08
SKP1-208ENST00000521216 UBP1Q9NZI7 540 aa8.33□□□□□ -1.08
SKP1-208ENST00000521216 CRIM1Q9NZV1 1036 aa8.33□□□□□ -1.08
SKP1-208ENST00000521216 BMP3P12645 472 aa8.32□□□□□ -1.08
SKP1-208ENST00000521216 RPL6Q02878 288 aaKnown RBP8.32□□□□□ -1.08
SKP1-208ENST00000521216 APOBRQ0VD83 1088 aa8.32□□□□□ -1.08
SKP1-208ENST00000521216 GPAT2Q6NUI2 795 aa8.32□□□□□ -1.08
SKP1-208ENST00000521216 FAM196AQ6ZSG2 479 aa8.32□□□□□ -1.08
SKP1-208ENST00000521216 FAM46AQ96IP4 442 aaKnown RBP8.32□□□□□ -1.08
SKP1-208ENST00000521216 DISC1Q9NRI5 854 aa8.32□□□□□ -1.08
SKP1-208ENST00000521216 FAM105AQ9NUU6 356 aa8.32□□□□□ -1.08
SKP1-208ENST00000521216 INPP5FQ9Y2H2 1132 aa8.32□□□□□ -1.08
SKP1-208ENST00000521216 HIF3AQ9Y2N7 669 aa8.32□□□□□ -1.08
SKP1-208ENST00000521216 PCDHGC5Q9Y5F6 944 aa8.32□□□□□ -1.08
SKP1-208ENST00000521216 SYNGAP1Q96PV0 1343 aa8.31□□□□□ -1.08
SKP1-208ENST00000521216 FAM221AA4D161 298 aa8.31□□□□□ -1.08
SKP1-208ENST00000521216 GREM1O60565 184 aa8.31□□□□□ -1.08
SKP1-208ENST00000521216 CILPO75339 1184 aa8.31□□□□□ -1.08
SKP1-208ENST00000521216 ITGB2P05107 769 aa8.31□□□□□ -1.08
SKP1-208ENST00000521216 HCLS1P14317 486 aaPredicted RBP8.31□□□□□ -1.08
SKP1-208ENST00000521216 TNNI2P48788 182 aa8.31□□□□□ -1.08
SKP1-208ENST00000521216 ERVK-24P63145 666 aa8.31□□□□□ -1.08
SKP1-208ENST00000521216 PAK2Q13177 524 aa8.31□□□□□ -1.08
SKP1-208ENST00000521216 TTLL4Q14679 1199 aa8.31□□□□□ -1.08
SKP1-208ENST00000521216 SEZ6Q53EL9 994 aa8.31□□□□□ -1.08
SKP1-208ENST00000521216 SGO2Q562F6 1265 aa8.31□□□□□ -1.08
SKP1-208ENST00000521216 EAF1Q96JC9 268 aaPredicted RBP8.31□□□□□ -1.08
SKP1-208ENST00000521216 LGR6Q9HBX8 967 aa8.31□□□□□ -1.08
SKP1-208ENST00000521216 CAPN10Q9HC96 672 aa8.31□□□□□ -1.08
SKP1-208ENST00000521216 SNCAIPQ9Y6H5 919 aa8.31□□□□□ -1.08
SKP1-208ENST00000521216 DHX15O43143 795 aaKnown RBP8.3□□□□□ -1.08
SKP1-208ENST00000521216 MCM4P33991 863 aa8.3□□□□□ -1.08
SKP1-208ENST00000521216 ETF1P62495 437 aaKnown RBP8.3□□□□□ -1.08
SKP1-208ENST00000521216 DOC2BQ14184 412 aa8.3□□□□□ -1.08
SKP1-208ENST00000521216 CWF19L2Q2TBE0 894 aaKnown RBP8.3□□□□□ -1.08
SKP1-208ENST00000521216 UVSSAQ2YD98 709 aa8.3□□□□□ -1.08
SKP1-208ENST00000521216 CDPF1Q6NVV7 123 aa8.3□□□□□ -1.08
SKP1-208ENST00000521216 ARMC10Q8N2F6 343 aa8.3□□□□□ -1.08
SKP1-208ENST00000521216 FBLIM1Q8WUP2 373 aa8.3□□□□□ -1.08
SKP1-208ENST00000521216 MYRFLQ96LU7 910 aa8.3□□□□□ -1.08
SKP1-208ENST00000521216 GRIN3BO60391 1043 aa8.29□□□□□ -1.08
SKP1-208ENST00000521216 RANGAP1P46060 587 aaPredicted RBP8.29□□□□□ -1.08
SKP1-208ENST00000521216 CRKP46108 304 aa8.29□□□□□ -1.08
SKP1-208ENST00000521216 MPP2Q14168 576 aa8.29□□□□□ -1.08
SKP1-208ENST00000521216 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.29□□□□□ -1.08
SKP1-208ENST00000521216 RNF214Q8ND24 703 aa8.29□□□□□ -1.08
SKP1-208ENST00000521216 NKD1Q969G9 470 aa8.29□□□□□ -1.08
SKP1-208ENST00000521216 YIPF2Q9BWQ6 316 aa8.29□□□□□ -1.08
SKP1-208ENST00000521216 NT5C1AQ9BXI3 368 aa8.29□□□□□ -1.08
SKP1-208ENST00000521216 KCNQ5Q9NR82 932 aa8.29□□□□□ -1.08
SKP1-208ENST00000521216 TPSG1Q9NRR2 321 aa8.29□□□□□ -1.08
SKP1-208ENST00000521216 DAGLAQ9Y4D2 1042 aa8.29□□□□□ -1.08
SKP1-208ENST00000521216 GFRA2O00451 464 aa8.28□□□□□ -1.08
SKP1-208ENST00000521216 MSTNO14793 375 aa8.28□□□□□ -1.08
SKP1-208ENST00000521216 NFICP08651 508 aa8.28□□□□□ -1.08
SKP1-208ENST00000521216 MAP4P27816 1152 aaKnown RBP8.28□□□□□ -1.08
SKP1-208ENST00000521216 NFKBIBQ15653 356 aa8.28□□□□□ -1.08
SKP1-208ENST00000521216 CDC37L1Q7L3B6 337 aa8.28□□□□□ -1.08
SKP1-208ENST00000521216 CYFIP1Q7L576 1253 aa8.28□□□□□ -1.08
SKP1-208ENST00000521216 REC114Q7Z4M0 266 aa8.28□□□□□ -1.08
SKP1-208ENST00000521216 FAM20CQ8IXL6 584 aa8.28□□□□□ -1.08
SKP1-208ENST00000521216 SSBP4Q9BWG4 385 aaPredicted RBP8.28□□□□□ -1.08
SKP1-208ENST00000521216 BRMS1Q9HCU9 246 aa8.28□□□□□ -1.08
SKP1-208ENST00000521216 ROBO2Q9HCK4 1378 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms