RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 FMNL2Q96PY5 1086 aa5.92□□□□□ -1.46
VPS13B-208ENST00000521037 ADGRB1O14514 1584 aa5.92□□□□□ -1.46
VPS13B-208ENST00000521037 INPP5BP32019 993 aa5.91□□□□□ -1.46
VPS13B-208ENST00000521037 DDB1Q16531 1140 aa5.91□□□□□ -1.46
VPS13B-208ENST00000521037 FAM35AQ86V20 835 aa5.91□□□□□ -1.46
VPS13B-208ENST00000521037 AMIGO3Q86WK7 504 aa5.91□□□□□ -1.46
VPS13B-208ENST00000521037 GAS2L2Q8NHY3 880 aa5.91□□□□□ -1.46
VPS13B-208ENST00000521037 POM121Q96HA1 1249 aa5.91□□□□□ -1.46
VPS13B-208ENST00000521037 POM121CA8CG34 1229 aa5.9□□□□□ -1.46
VPS13B-208ENST00000521037 TGFBR3LH3BV60 316 aa5.9□□□□□ -1.46
VPS13B-208ENST00000521037 NUTM2GQ5VZR2 741 aa5.9□□□□□ -1.46
VPS13B-208ENST00000521037 TMEM130Q8N3G9 435 aa5.9□□□□□ -1.46
VPS13B-208ENST00000521037 IFT43Q96FT9 208 aa5.9□□□□□ -1.46
VPS13B-208ENST00000521037 PRAM1Q96QH2 718 aa5.9□□□□□ -1.46
VPS13B-208ENST00000521037 C14orf93Q9H972 538 aaKnown RBP5.9□□□□□ -1.46
VPS13B-208ENST00000521037 C11orf16Q9NQ32 467 aa5.9□□□□□ -1.46
VPS13B-208ENST00000521037 MKRN1Q9UHC7 482 aaKnown RBP5.9□□□□□ -1.46
VPS13B-208ENST00000521037 CHMP3Q9Y3E7 222 aa5.9□□□□□ -1.46
VPS13B-208ENST00000521037 POLR3AO14802 1390 aaPredicted RBP5.9□□□□□ -1.47
VPS13B-208ENST00000521037 NSD2O96028 1365 aa5.9□□□□□ -1.47
VPS13B-208ENST00000521037 ARID1BQ8NFD5 2236 aaPredicted RBP5.9□□□□□ -1.47
VPS13B-208ENST00000521037 BTAF1O14981 1849 aa5.9□□□□□ -1.47
VPS13B-208ENST00000521037 C10orf71Q711Q0 1435 aa5.9□□□□□ -1.47
VPS13B-208ENST00000521037 SLIT3O75094 1523 aa5.89□□□□□ -1.47
VPS13B-208ENST00000521037 AKAP12Q02952 1782 aa5.89□□□□□ -1.47
VPS13B-208ENST00000521037 ATP9BO43861 1147 aa5.89□□□□□ -1.47
VPS13B-208ENST00000521037 MED26O95402 600 aa5.89□□□□□ -1.47
VPS13B-208ENST00000521037 CPB1P15086 417 aa5.89□□□□□ -1.47
VPS13B-208ENST00000521037 CD97P48960 835 aa5.89□□□□□ -1.47
VPS13B-208ENST00000521037 HIF1AQ16665 826 aa5.89□□□□□ -1.47
VPS13B-208ENST00000521037 RTN1Q16799 776 aa5.89□□□□□ -1.47
VPS13B-208ENST00000521037 COL23A1Q86Y22 540 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-208ENST00000521037 CD2APQ9Y5K6 639 aa5.89□□□□□ -1.47
VPS13B-208ENST00000521037 PXDNLA1KZ92 1463 aa5.89□□□□□ -1.47
VPS13B-208ENST00000521037 TOGARAM1Q9Y4F4 1720 aa5.88□□□□□ -1.47
VPS13B-208ENST00000521037 FOXN1O15353 648 aa5.88□□□□□ -1.47
VPS13B-208ENST00000521037 TARSP26639 723 aaKnown RBP5.88□□□□□ -1.47
VPS13B-208ENST00000521037 EVA1CP58658 441 aa5.88□□□□□ -1.47
VPS13B-208ENST00000521037 FSTL1Q12841 308 aa5.88□□□□□ -1.47
VPS13B-208ENST00000521037 PCSK7Q16549 785 aa5.88□□□□□ -1.47
VPS13B-208ENST00000521037 Q6ZS46 218 aa5.88□□□□□ -1.47
VPS13B-208ENST00000521037 DHX32Q7L7V1 743 aaKnown RBP5.88□□□□□ -1.47
VPS13B-208ENST00000521037 SCG3Q8WXD2 468 aaKnown RBP5.88□□□□□ -1.47
VPS13B-208ENST00000521037 BRD4O60885 1362 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-208ENST00000521037 GPRASP1Q5JY77 1395 aa5.88□□□□□ -1.47
VPS13B-208ENST00000521037 USP6P35125 1406 aa5.88□□□□□ -1.47
VPS13B-208ENST00000521037 ABCC6O95255 1503 aa5.88□□□□□ -1.47
VPS13B-208ENST00000521037 GCP02774 474 aa5.87□□□□□ -1.47
VPS13B-208ENST00000521037 FSTP19883 344 aa5.87□□□□□ -1.47
VPS13B-208ENST00000521037 POLD1P28340 1107 aa5.87□□□□□ -1.47
VPS13B-208ENST00000521037 GPLD1P80108 840 aa5.87□□□□□ -1.47
VPS13B-208ENST00000521037 SAFB2Q14151 953 aaKnown RBP eCLIP5.87□□□□□ -1.47
VPS13B-208ENST00000521037 WFDC8Q8IUA0 241 aa5.87□□□□□ -1.47
VPS13B-208ENST00000521037 PNMA5Q96PV4 448 aa5.87□□□□□ -1.47
VPS13B-208ENST00000521037 USP54Q70EL1 1684 aa5.87□□□□□ -1.47
VPS13B-208ENST00000521037 A0A0C4DFX4 3053 aa5.87□□□□□ -1.47
VPS13B-208ENST00000521037 LY75O60449 1722 aa5.86□□□□□ -1.47
VPS13B-208ENST00000521037 WDR17Q8IZU2 1322 aa5.86□□□□□ -1.47
VPS13B-208ENST00000521037 IGSF1Q8N6C5 1336 aa5.86□□□□□ -1.47
VPS13B-208ENST00000521037 ALX3O95076 343 aa5.86□□□□□ -1.47
VPS13B-208ENST00000521037 CFAP70Q5T0N1 1121 aa5.86□□□□□ -1.47
VPS13B-208ENST00000521037 HDGFL1Q5TGJ6 251 aa5.86□□□□□ -1.47
VPS13B-208ENST00000521037 SMIM5Q71RC9 77 aa5.86□□□□□ -1.47
VPS13B-208ENST00000521037 ACSBG1Q96GR2 724 aa5.86□□□□□ -1.47
VPS13B-208ENST00000521037 ABHD8Q96I13 439 aa5.86□□□□□ -1.47
VPS13B-208ENST00000521037 ZNF594Q96JF6 807 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-208ENST00000521037 HIRIP3Q9BW71 556 aaPredicted RBP5.86□□□□□ -1.47
VPS13B-208ENST00000521037 AKTIPQ9H8T0 292 aa5.86□□□□□ -1.47
VPS13B-208ENST00000521037 PRDM10Q9NQV6 1147 aa5.86□□□□□ -1.47
VPS13B-208ENST00000521037 PCMTD2Q9NV79 361 aa5.86□□□□□ -1.47
VPS13B-208ENST00000521037 KCPQ6ZWJ8 1503 aa5.85□□□□□ -1.47
VPS13B-208ENST00000521037 F8W735 103 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-208ENST00000521037 OPLAHO14841 1288 aa5.85□□□□□ -1.47
VPS13B-208ENST00000521037 MLLT1Q03111 559 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-208ENST00000521037 TRIM26Q12899 539 aaPredicted RBP5.85□□□□□ -1.47
VPS13B-208ENST00000521037 ELMSAN1Q6PJG2 1045 aa5.85□□□□□ -1.47
VPS13B-208ENST00000521037 SZT2Q5T011 3432 aa5.84□□□□□ -1.47
VPS13B-208ENST00000521037 ANKRD30BQ9BXX2 1392 aa5.84□□□□□ -1.47
VPS13B-208ENST00000521037 KIAA1324LA8MWY0 1029 aaPredicted RBP5.84□□□□□ -1.47
VPS13B-208ENST00000521037 TM4SF5O14894 197 aa5.84□□□□□ -1.47
VPS13B-208ENST00000521037 ADAMTS4O75173 837 aa5.84□□□□□ -1.47
VPS13B-208ENST00000521037 SASH3O75995 380 aa5.84□□□□□ -1.47
VPS13B-208ENST00000521037 EGFRP00533 1210 aa5.84□□□□□ -1.47
VPS13B-208ENST00000521037 SSTR4P31391 388 aa5.84□□□□□ -1.47
VPS13B-208ENST00000521037 IDH3AP50213 366 aa5.84□□□□□ -1.47
VPS13B-208ENST00000521037 NRLP54845 237 aa5.84□□□□□ -1.47
VPS13B-208ENST00000521037 SEC13P55735 322 aa5.84□□□□□ -1.47
VPS13B-208ENST00000521037 FAM50AQ14320 339 aaKnown RBP5.84□□□□□ -1.47
VPS13B-208ENST00000521037 CARD10Q9BWT7 1032 aa5.84□□□□□ -1.47
VPS13B-208ENST00000521037 SMG9Q9H0W8 520 aaKnown RBP5.84□□□□□ -1.47
VPS13B-208ENST00000521037 KLK14Q9P0G3 267 aa5.84□□□□□ -1.47
VPS13B-208ENST00000521037 ACEP12821 1306 aa5.83□□□□□ -1.48
VPS13B-208ENST00000521037 KCNA3P22001 575 aa5.83□□□□□ -1.48
VPS13B-208ENST00000521037 IGFBP4P22692 258 aa5.83□□□□□ -1.48
VPS13B-208ENST00000521037 FLIIQ13045 1269 aa5.83□□□□□ -1.48
VPS13B-208ENST00000521037 SETDB1Q15047 1291 aa5.83□□□□□ -1.48
VPS13B-208ENST00000521037 LCE1DQ5T752 114 aa5.83□□□□□ -1.48
VPS13B-208ENST00000521037 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
VPS13B-208ENST00000521037 MRPL18Q9H0U6 180 aaKnown RBP5.83□□□□□ -1.48
VPS13B-208ENST00000521037 TLR7Q9NYK1 1049 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms