RNA–Protein interactions for RNA: ENST00000520986.5

DENND3-215, Transcript of DENN domain containing 3, human

TSL 2

Gene DENND3, Length 899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-215	ENST00000520986	PLCG2	P16885	1265 aa		28.83	■■■□□ 2.21
DENND3-215	ENST00000520986	DYNLL1	P63167	89 aa	Known RBP	28.83	■■■□□ 2.21
DENND3-215	ENST00000520986	SLC9C2	Q5TAH2	1124 aa		28.83	■■■□□ 2.21
DENND3-215	ENST00000520986	MIGA2	Q7L4E1	593 aa		28.83	■■■□□ 2.21
DENND3-215	ENST00000520986	ANKRD13A	Q8IZ07	590 aa		28.83	■■■□□ 2.21
DENND3-215	ENST00000520986	MIGA1	Q8NAN2	632 aa		28.83	■■■□□ 2.21
DENND3-215	ENST00000520986	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	28.83	■■■□□ 2.21
DENND3-215	ENST00000520986	ZBTB47	Q9UFB7	747 aa	Predicted RBP	28.83	■■■□□ 2.21
DENND3-215	ENST00000520986	PCNT	O95613	3336 aa		28.83	■■■□□ 2.21
DENND3-215	ENST00000520986	FOCAD	Q5VW36	1801 aa		28.83	■■■□□ 2.21
DENND3-215	ENST00000520986	DDTL	A6NHG4	134 aa	Predicted RBP	28.82	■■■□□ 2.2
DENND3-215	ENST00000520986	KIF23	Q02241	960 aa	Predicted RBP	28.82	■■■□□ 2.2
DENND3-215	ENST00000520986	DCAF15	Q66K64	600 aa		28.82	■■■□□ 2.2
DENND3-215	ENST00000520986	SLC10A4	Q96EP9	437 aa		28.82	■■■□□ 2.2
DENND3-215	ENST00000520986	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	28.82	■■■□□ 2.2
DENND3-215	ENST00000520986	TTC41P	Q6P2S7	1318 aa		28.82	■■■□□ 2.2
DENND3-215	ENST00000520986	ATRNL1	Q5VV63	1379 aa		28.81	■■■□□ 2.2
DENND3-215	ENST00000520986	SALL3	Q9BXA9	1300 aa		28.81	■■■□□ 2.2
DENND3-215	ENST00000520986	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	28.81	■■■□□ 2.2
DENND3-215	ENST00000520986	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	28.81	■■■□□ 2.2
DENND3-215	ENST00000520986	AIDA	Q96BJ3	306 aa		28.81	■■■□□ 2.2
DENND3-215	ENST00000520986	CSRNP1	Q96S65	589 aa		28.81	■■■□□ 2.2
DENND3-215	ENST00000520986	MYH7	P12883	1935 aa		28.81	■■■□□ 2.2
DENND3-215	ENST00000520986	MX1	P20591	662 aa		28.8	■■■□□ 2.2
DENND3-215	ENST00000520986	MAP3K9	P80192	1104 aa		28.8	■■■□□ 2.2
DENND3-215	ENST00000520986	PI4K2B	Q8TCG2	481 aa		28.8	■■■□□ 2.2
DENND3-215	ENST00000520986	ZNF341	Q9BYN7	854 aa		28.8	■■■□□ 2.2
DENND3-215	ENST00000520986	OSBPL5	Q9H0X9	879 aa	Predicted RBP	28.8	■■■□□ 2.2
DENND3-215	ENST00000520986	COL2A1	P02458	1487 aa	Predicted RBP	28.79	■■■□□ 2.2
DENND3-215	ENST00000520986	ZNF532	Q9HCE3	1301 aa		28.79	■■■□□ 2.2
DENND3-215	ENST00000520986	TCRBV5S4A2T	A0A5A2	114 aa		28.79	■■■□□ 2.2
DENND3-215	ENST00000520986	MKRN3	Q13064	507 aa	Known RBP	28.79	■■■□□ 2.2
DENND3-215	ENST00000520986	IFFO2	Q5TF58	517 aa		28.79	■■■□□ 2.2
DENND3-215	ENST00000520986	WRNIP1	Q96S55	665 aa		28.79	■■■□□ 2.2
DENND3-215	ENST00000520986	VGLL4	Q14135	290 aa		28.78	■■■□□ 2.2
DENND3-215	ENST00000520986	SPRYD7	Q5W111	196 aa		28.78	■■■□□ 2.2
DENND3-215	ENST00000520986	B4GALNT3	Q6L9W6	998 aa		28.78	■■■□□ 2.2
DENND3-215	ENST00000520986	TGFBRAP1	Q8WUH2	860 aa		28.78	■■■□□ 2.2
DENND3-215	ENST00000520986	ELP3	Q9H9T3	547 aa		28.78	■■■□□ 2.2
DENND3-215	ENST00000520986	FOXN1	O15353	648 aa		28.77	■■■□□ 2.2
DENND3-215	ENST00000520986	ADD2	P35612	726 aa		28.77	■■■□□ 2.2
DENND3-215	ENST00000520986	SLFNL1	Q499Z3	407 aa		28.77	■■■□□ 2.2
DENND3-215	ENST00000520986	CERS3	Q8IU89	383 aa		28.77	■■■□□ 2.2
DENND3-215	ENST00000520986	MAPKAPK5	Q8IW41	473 aa		28.77	■■■□□ 2.2
DENND3-215	ENST00000520986	WNK4	Q96J92	1243 aa		28.77	■■■□□ 2.2
DENND3-215	ENST00000520986	RIOK1	Q9BRS2	568 aa	Known RBP	28.77	■■■□□ 2.2
DENND3-215	ENST00000520986	LNPK	Q9C0E8	428 aa		28.77	■■■□□ 2.2
DENND3-215	ENST00000520986	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	28.77	■■■□□ 2.2
DENND3-215	ENST00000520986	FLT1	P17948	1338 aa		28.76	■■■□□ 2.19
DENND3-215	ENST00000520986	ERC2	O15083	957 aa		28.76	■■■□□ 2.19
DENND3-215	ENST00000520986	CHGB	P05060	677 aa		28.76	■■■□□ 2.19
DENND3-215	ENST00000520986	SLURP2	P0DP57	97 aa		28.76	■■■□□ 2.19
DENND3-215	ENST00000520986	ZNF112	Q9UJU3	913 aa		28.76	■■■□□ 2.19
DENND3-215	ENST00000520986	CSAD	Q9Y600	493 aa		28.76	■■■□□ 2.19
DENND3-215	ENST00000520986	MAGEB6P1	A0A0J9YX57	407 aa		28.75	■■■□□ 2.19
DENND3-215	ENST00000520986	GLRX3	O76003	335 aa	Known RBP	28.75	■■■□□ 2.19
DENND3-215	ENST00000520986	INPP5B	P32019	993 aa		28.75	■■■□□ 2.19
DENND3-215	ENST00000520986	MAP3K10	Q02779	954 aa		28.75	■■■□□ 2.19
DENND3-215	ENST00000520986	ZKSCAN4	Q969J2	545 aa	Predicted RBP	28.75	■■■□□ 2.19
DENND3-215	ENST00000520986	SNCAIP	Q9Y6H5	919 aa		28.75	■■■□□ 2.19
DENND3-215	ENST00000520986	LAMB1	P07942	1786 aa		28.75	■■■□□ 2.19
DENND3-215	ENST00000520986	ZBTB48	P10074	688 aa	Predicted RBP	28.74	■■■□□ 2.19
DENND3-215	ENST00000520986	GJA5	P36382	358 aa		28.74	■■■□□ 2.19
DENND3-215	ENST00000520986	KBTBD3	Q8NAB2	608 aa		28.74	■■■□□ 2.19
DENND3-215	ENST00000520986	BEGAIN	Q9BUH8	593 aa		28.74	■■■□□ 2.19
DENND3-215	ENST00000520986	SIPA1L1	O43166	1804 aa		28.73	■■■□□ 2.19
DENND3-215	ENST00000520986	NUCB1	Q02818	461 aa		28.73	■■■□□ 2.19
DENND3-215	ENST00000520986	CNKSR2	Q8WXI2	1034 aa		28.73	■■■□□ 2.19
DENND3-215	ENST00000520986	OPTN	Q96CV9	577 aa		28.73	■■■□□ 2.19
DENND3-215	ENST00000520986	STAP2	Q9UGK3	403 aa		28.73	■■■□□ 2.19
DENND3-215	ENST00000520986	PDE1A	P54750	535 aa		28.72	■■■□□ 2.19
DENND3-215	ENST00000520986	UBE3C	Q15386	1083 aa		28.72	■■■□□ 2.19
DENND3-215	ENST00000520986	COL13A1	Q5TAT6	717 aa	Predicted RBP	28.72	■■■□□ 2.19
DENND3-215	ENST00000520986	CHD1L	Q86WJ1	897 aa		28.72	■■■□□ 2.19
DENND3-215	ENST00000520986	REM2	Q8IYK8	340 aa	Predicted RBP	28.72	■■■□□ 2.19
DENND3-215	ENST00000520986	PHF20L1	A8MW92	1017 aa		28.71	■■■□□ 2.19
DENND3-215	ENST00000520986	USP5	P45974	858 aa		28.71	■■■□□ 2.19
DENND3-215	ENST00000520986	CTCF	P49711	727 aa	Predicted RBP	28.71	■■■□□ 2.19
DENND3-215	ENST00000520986	ZSCAN25	Q6NSZ9	544 aa		28.71	■■■□□ 2.19
DENND3-215	ENST00000520986	LCORL	Q8N3X6	602 aa		28.71	■■■□□ 2.19
DENND3-215	ENST00000520986	DHX36	Q9H2U1	1008 aa	Known RBP	28.71	■■■□□ 2.19
DENND3-215	ENST00000520986	MYH1	P12882	1939 aa		28.71	■■■□□ 2.19
DENND3-215	ENST00000520986	SPDYE5	A6NIY4	337 aa		28.7	■■■□□ 2.18
DENND3-215	ENST00000520986	TBC1D12	O60347	775 aa		28.7	■■■□□ 2.18
DENND3-215	ENST00000520986	SAP30BP	Q9UHR5	308 aa	Known RBP	28.7	■■■□□ 2.18
DENND3-215	ENST00000520986	PALD1	Q9ULE6	856 aa		28.7	■■■□□ 2.18
DENND3-215	ENST00000520986	FAM196B	A6NMK8	535 aa		28.69	■■■□□ 2.18
DENND3-215	ENST00000520986	TM4SF4	P48230	202 aa		28.69	■■■□□ 2.18
DENND3-215	ENST00000520986	OTUD5	Q96G74	571 aa		28.69	■■■□□ 2.18
DENND3-215	ENST00000520986	DDX60L	Q5H9U9	1706 aa	Known RBP	28.69	■■■□□ 2.18
DENND3-215	ENST00000520986	CA12	O43570	354 aa		28.68	■■■□□ 2.18
DENND3-215	ENST00000520986	MBD4	O95243	580 aa		28.68	■■■□□ 2.18
DENND3-215	ENST00000520986	HSPA8	P11142	646 aa	Known RBP	28.68	■■■□□ 2.18
DENND3-215	ENST00000520986	NOL9	Q5SY16	702 aa	Known RBP	28.68	■■■□□ 2.18
DENND3-215	ENST00000520986	ERO1B	Q86YB8	467 aa		28.68	■■■□□ 2.18
DENND3-215	ENST00000520986	CRNKL1	Q9BZJ0	848 aa	Known RBP	28.68	■■■□□ 2.18
DENND3-215	ENST00000520986	ARMT1	Q9H993	441 aa		28.68	■■■□□ 2.18
DENND3-215	ENST00000520986	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	28.68	■■■□□ 2.18
DENND3-215	ENST00000520986	PI4KB	Q9UBF8	816 aa		28.68	■■■□□ 2.18
DENND3-215	ENST00000520986	TSKS	Q9UJT2	592 aa		28.68	■■■□□ 2.18

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms