RNA–Protein interactions for RNA: ENST00000520940.1

EXTL3-208, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 542 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-208ENST00000520940 SNAPC2Q13487 334 aa12.94□□□□□ -0.34
EXTL3-208ENST00000520940 OTOP1Q7RTM1 612 aa12.94□□□□□ -0.34
EXTL3-208ENST00000520940 CD99L2Q8TCZ2 262 aa12.94□□□□□ -0.34
EXTL3-208ENST00000520940 ZNF384Q8TF68 577 aa12.94□□□□□ -0.34
EXTL3-208ENST00000520940 ZFYVE28Q9HCC9 887 aa12.94□□□□□ -0.34
EXTL3-208ENST00000520940 GPR108Q9NPR9 543 aa12.94□□□□□ -0.34
EXTL3-208ENST00000520940 BTBD19C9JJ37 291 aa12.93□□□□□ -0.34
EXTL3-208ENST00000520940 ZBTB7BO15156 539 aaPredicted RBP12.93□□□□□ -0.34
EXTL3-208ENST00000520940 RHBDL3P58872 404 aa12.93□□□□□ -0.34
EXTL3-208ENST00000520940 GSTO1P78417 241 aa12.93□□□□□ -0.34
EXTL3-208ENST00000520940 SP3Q02447 781 aa12.93□□□□□ -0.34
EXTL3-208ENST00000520940 TNNI3KQ59H18 835 aa12.93□□□□□ -0.34
EXTL3-208ENST00000520940 NOL9Q5SY16 702 aaKnown RBP12.93□□□□□ -0.34
EXTL3-208ENST00000520940 TBC1D9Q6ZT07 1266 aa12.93□□□□□ -0.34
EXTL3-208ENST00000520940 SH3BP5LQ7L8J4 393 aa12.93□□□□□ -0.34
EXTL3-208ENST00000520940 NSUN4Q96CB9 384 aaKnown RBP12.93□□□□□ -0.34
EXTL3-208ENST00000520940 DBNDD2Q9BQY9 259 aa12.93□□□□□ -0.34
EXTL3-208ENST00000520940 ZCCHC17Q9NP64 241 aaKnown RBP12.93□□□□□ -0.34
EXTL3-208ENST00000520940 DDX4Q9NQI0 724 aaKnown RBP12.93□□□□□ -0.34
EXTL3-208ENST00000520940 FPGT-TNNI3KV9GXZ4 949 aa12.93□□□□□ -0.34
EXTL3-208ENST00000520940 SIPA1L1O43166 1804 aa12.92□□□□□ -0.34
EXTL3-208ENST00000520940 COL2A1P02458 1487 aaPredicted RBP12.92□□□□□ -0.34
EXTL3-208ENST00000520940 GPR75-ASB3A0A0A6YYF3 556 aa12.92□□□□□ -0.34
EXTL3-208ENST00000520940 SURF6O75683 361 aaKnown RBP12.92□□□□□ -0.34
EXTL3-208ENST00000520940 PICALMQ13492 652 aa12.92□□□□□ -0.34
EXTL3-208ENST00000520940 TTC39AQ5SRH9 613 aa12.92□□□□□ -0.34
EXTL3-208ENST00000520940 ZSCAN29Q8IWY8 852 aaPredicted RBP12.92□□□□□ -0.34
EXTL3-208ENST00000520940 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.92□□□□□ -0.34
EXTL3-208ENST00000520940 PANK1Q8TE04 598 aa12.92□□□□□ -0.34
EXTL3-208ENST00000520940 EFCC1Q9HA90 598 aa12.92□□□□□ -0.34
EXTL3-208ENST00000520940 RAI14Q9P0K7 980 aa12.92□□□□□ -0.34
EXTL3-208ENST00000520940 KCNH4Q9UQ05 1017 aa12.92□□□□□ -0.34
EXTL3-208ENST00000520940 NOP58Q9Y2X3 529 aaKnown RBP12.92□□□□□ -0.34
EXTL3-208ENST00000520940 MGAMO43451 1857 aa12.91□□□□□ -0.34
EXTL3-208ENST00000520940 DDTLA6NHG4 134 aaPredicted RBP12.91□□□□□ -0.34
EXTL3-208ENST00000520940 PHF20L1A8MW92 1017 aa12.91□□□□□ -0.34
EXTL3-208ENST00000520940 LDHCP07864 332 aa12.91□□□□□ -0.34
EXTL3-208ENST00000520940 CAP1Q01518 475 aa12.91□□□□□ -0.34
EXTL3-208ENST00000520940 CEP85Q6P2H3 762 aa12.91□□□□□ -0.34
EXTL3-208ENST00000520940 MKI67P46013 3256 aaKnown RBP12.91□□□□□ -0.34
EXTL3-208ENST00000520940 LOC285556D6RIA3 1793 aa12.9□□□□□ -0.34
EXTL3-208ENST00000520940 TLR2O60603 784 aa12.9□□□□□ -0.34
EXTL3-208ENST00000520940 NPM3O75607 178 aaKnown RBP12.9□□□□□ -0.34
EXTL3-208ENST00000520940 MAP4K4O95819 1239 aaPredicted RBP12.9□□□□□ -0.34
EXTL3-208ENST00000520940 CCDC158Q5M9N0 1113 aa12.9□□□□□ -0.34
EXTL3-208ENST00000520940 SCYL3Q8IZE3 742 aa12.9□□□□□ -0.34
EXTL3-208ENST00000520940 SNRKQ9NRH2 765 aa12.9□□□□□ -0.34
EXTL3-208ENST00000520940 LRP2BPQ9P2M1 347 aa12.9□□□□□ -0.34
EXTL3-208ENST00000520940 DBNLQ9UJU6 430 aaKnown RBP12.9□□□□□ -0.34
EXTL3-208ENST00000520940 PTPN22Q9Y2R2 807 aa12.9□□□□□ -0.34
EXTL3-208ENST00000520940 MYH1P12882 1939 aa12.9□□□□□ -0.35
EXTL3-208ENST00000520940 SLURP2P0DP57 97 aa12.89□□□□□ -0.35
EXTL3-208ENST00000520940 MAP3K10Q02779 954 aa12.89□□□□□ -0.35
EXTL3-208ENST00000520940 ANKRD23Q86SG2 305 aa12.89□□□□□ -0.35
EXTL3-208ENST00000520940 PICK1Q9NRD5 415 aa12.89□□□□□ -0.35
EXTL3-208ENST00000520940 TLR7Q9NYK1 1049 aaKnown RBP12.89□□□□□ -0.35
EXTL3-208ENST00000520940 PDHXO00330 501 aa12.88□□□□□ -0.35
EXTL3-208ENST00000520940 CXCL11O14625 94 aa12.88□□□□□ -0.35
EXTL3-208ENST00000520940 CYP2E1P05181 493 aaPredicted RBP12.88□□□□□ -0.35
EXTL3-208ENST00000520940 MS4A1P11836 297 aa12.88□□□□□ -0.35
EXTL3-208ENST00000520940 PTPRAP18433 802 aa12.88□□□□□ -0.35
EXTL3-208ENST00000520940 MOGSQ13724 837 aa12.88□□□□□ -0.35
EXTL3-208ENST00000520940 NAA16Q6N069 864 aaPredicted RBP12.88□□□□□ -0.35
EXTL3-208ENST00000520940 TEX11Q8IYF3 940 aa12.88□□□□□ -0.35
EXTL3-208ENST00000520940 ZNF512BQ96KM6 892 aaPredicted RBP12.88□□□□□ -0.35
EXTL3-208ENST00000520940 NOL10Q9BSC4 688 aaKnown RBP12.88□□□□□ -0.35
EXTL3-208ENST00000520940 OSBPL5Q9H0X9 879 aaPredicted RBP12.88□□□□□ -0.35
EXTL3-208ENST00000520940 EXOC6BQ9Y2D4 811 aa12.88□□□□□ -0.35
EXTL3-208ENST00000520940 ADGRA2Q96PE1 1338 aa12.88□□□□□ -0.35
EXTL3-208ENST00000520940 CTNND1O60716 968 aaKnown RBP12.87□□□□□ -0.35
EXTL3-208ENST00000520940 ZAP70P43403 619 aa12.87□□□□□ -0.35
EXTL3-208ENST00000520940 LACTBP83111 547 aaPredicted RBP12.87□□□□□ -0.35
EXTL3-208ENST00000520940 ARHGEF6Q15052 776 aa12.87□□□□□ -0.35
EXTL3-208ENST00000520940 ERC1Q8IUD2 1116 aa12.87□□□□□ -0.35
EXTL3-208ENST00000520940 SH3RF3Q8TEJ3 882 aaPredicted RBP12.87□□□□□ -0.35
EXTL3-208ENST00000520940 EAF2Q96CJ1 260 aaPredicted RBP12.87□□□□□ -0.35
EXTL3-208ENST00000520940 ARHGAP39Q9C0H5 1083 aa12.87□□□□□ -0.35
EXTL3-208ENST00000520940 CCDC8Q9H0W5 538 aaPredicted RBP12.87□□□□□ -0.35
EXTL3-208ENST00000520940 AATFQ9NY61 560 aaKnown RBP eCLIP12.87□□□□□ -0.35
EXTL3-208ENST00000520940 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.87□□□□□ -0.35
EXTL3-208ENST00000520940 ZHX2Q9Y6X8 837 aa12.87□□□□□ -0.35
EXTL3-208ENST00000520940 NAV1Q8NEY1 1877 aa12.87□□□□□ -0.35
EXTL3-208ENST00000520940 A0A0G2JLL6 359 aaPredicted RBP12.86□□□□□ -0.35
EXTL3-208ENST00000520940 FAM196BA6NMK8 535 aa12.86□□□□□ -0.35
EXTL3-208ENST00000520940 TBC1D12O60347 775 aa12.86□□□□□ -0.35
EXTL3-208ENST00000520940 PLCG2P16885 1265 aa12.86□□□□□ -0.35
EXTL3-208ENST00000520940 KIF22Q14807 665 aa12.86□□□□□ -0.35
EXTL3-208ENST00000520940 C17orf99Q6UX52 265 aa12.86□□□□□ -0.35
EXTL3-208ENST00000520940 PRRT2Q7Z6L0 340 aaPredicted RBP12.86□□□□□ -0.35
EXTL3-208ENST00000520940 ADGRA1Q86SQ6 560 aa12.86□□□□□ -0.35
EXTL3-208ENST00000520940 ARMC5Q96C12 935 aa12.86□□□□□ -0.35
EXTL3-208ENST00000520940 PARK7Q99497 189 aaKnown RBP12.86□□□□□ -0.35
EXTL3-208ENST00000520940 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.86□□□□□ -0.35
EXTL3-208ENST00000520940 PIH1D3Q9NQM4 214 aaKnown RBP12.86□□□□□ -0.35
EXTL3-208ENST00000520940 AFG3L2Q9Y4W6 797 aa12.86□□□□□ -0.35
EXTL3-208ENST00000520940 PTCH2Q9Y6C5 1203 aa12.86□□□□□ -0.35
EXTL3-208ENST00000520940 MYH7P12883 1935 aa12.86□□□□□ -0.35
EXTL3-208ENST00000520940 DDX60LQ5H9U9 1706 aaKnown RBP12.85□□□□□ -0.35
EXTL3-208ENST00000520940 DOCK3Q8IZD9 2030 aa12.85□□□□□ -0.35
EXTL3-208ENST00000520940 IGSF3O75054 1194 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms