RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 RRAGCQ9HB90 399 aa7.6□□□□□ -1.19
FAM49B-218ENST00000520887 CCDC87Q9NVE4 849 aa7.6□□□□□ -1.19
FAM49B-218ENST00000520887 PPP1R1BQ9UD71 204 aaPredicted RBP7.6□□□□□ -1.19
FAM49B-218ENST00000520887 SERPINA10Q9UK55 444 aa7.6□□□□□ -1.19
FAM49B-218ENST00000520887 MKL2Q9ULH7 1088 aa7.6□□□□□ -1.19
FAM49B-218ENST00000520887 ZNF652Q9Y2D9 606 aa7.6□□□□□ -1.19
FAM49B-218ENST00000520887 KDM3BQ7LBC6 1761 aa7.6□□□□□ -1.19
FAM49B-218ENST00000520887 TAF1LQ8IZX4 1826 aa7.59□□□□□ -1.19
FAM49B-218ENST00000520887 QSER1Q2KHR3 1735 aa7.59□□□□□ -1.19
FAM49B-218ENST00000520887 USP17L3A6NCW0 530 aa7.59□□□□□ -1.19
FAM49B-218ENST00000520887 USP17L4A6NCW7 530 aa7.59□□□□□ -1.19
FAM49B-218ENST00000520887 E9PSI1 815 aa7.59□□□□□ -1.19
FAM49B-218ENST00000520887 KHNYNO15037 678 aaKnown RBP7.59□□□□□ -1.19
FAM49B-218ENST00000520887 ZBTB7BO15156 539 aaPredicted RBP7.59□□□□□ -1.19
FAM49B-218ENST00000520887 ARAFP10398 606 aa7.59□□□□□ -1.19
FAM49B-218ENST00000520887 AMPD1P23109 780 aa7.59□□□□□ -1.19
FAM49B-218ENST00000520887 NOS2P35228 1153 aa7.59□□□□□ -1.19
FAM49B-218ENST00000520887 CRKLP46109 303 aaKnown RBP7.59□□□□□ -1.19
FAM49B-218ENST00000520887 EPHA4P54764 986 aa7.59□□□□□ -1.19
FAM49B-218ENST00000520887 TEAD4Q15561 434 aa7.59□□□□□ -1.19
FAM49B-218ENST00000520887 TRAPPC3LQ5T215 181 aa7.59□□□□□ -1.19
FAM49B-218ENST00000520887 USP17L2Q6R6M4 530 aa7.59□□□□□ -1.19
FAM49B-218ENST00000520887 USP17L1Q7RTZ2 530 aa7.59□□□□□ -1.19
FAM49B-218ENST00000520887 DNAJC10Q8IXB1 793 aa7.59□□□□□ -1.19
FAM49B-218ENST00000520887 TNS4Q8IZW8 715 aa7.59□□□□□ -1.19
FAM49B-218ENST00000520887 ZNF496Q96IT1 587 aaPredicted RBP7.59□□□□□ -1.19
FAM49B-218ENST00000520887 KCPQ6ZWJ8 1503 aa7.58□□□□□ -1.2
FAM49B-218ENST00000520887 NEURL1BA8MQ27 555 aa7.58□□□□□ -1.2
FAM49B-218ENST00000520887 ATP9BO43861 1147 aa7.58□□□□□ -1.2
FAM49B-218ENST00000520887 RPS6KA4O75676 772 aa7.58□□□□□ -1.2
FAM49B-218ENST00000520887 DDX58O95786 925 aaKnown RBP7.58□□□□□ -1.2
FAM49B-218ENST00000520887 EIF2S2P20042 333 aaKnown RBP7.58□□□□□ -1.2
FAM49B-218ENST00000520887 CANXP27824 592 aaKnown RBP7.58□□□□□ -1.2
FAM49B-218ENST00000520887 TXLNAP40222 546 aa7.58□□□□□ -1.2
FAM49B-218ENST00000520887 CCDC30Q5VVM6 783 aa7.58□□□□□ -1.2
FAM49B-218ENST00000520887 CCDC102BQ68D86 513 aa7.58□□□□□ -1.2
FAM49B-218ENST00000520887 PTF1AQ7RTS3 328 aa7.58□□□□□ -1.2
FAM49B-218ENST00000520887 SLC9A9Q8IVB4 645 aa7.58□□□□□ -1.2
FAM49B-218ENST00000520887 TPCN2Q8NHX9 752 aa7.58□□□□□ -1.2
FAM49B-218ENST00000520887 ZDHHC1Q8WTX9 485 aa7.58□□□□□ -1.2
FAM49B-218ENST00000520887 CCDC97Q96F63 343 aaPredicted RBP7.58□□□□□ -1.2
FAM49B-218ENST00000520887 UCN2Q96RP3 112 aa7.58□□□□□ -1.2
FAM49B-218ENST00000520887 SPON1Q9HCB6 807 aa7.58□□□□□ -1.2
FAM49B-218ENST00000520887 COL5A3P25940 1745 aaPredicted RBP7.58□□□□□ -1.2
FAM49B-218ENST00000520887 TJP1Q07157 1748 aa7.58□□□□□ -1.2
FAM49B-218ENST00000520887 COL15A1P39059 1388 aa7.58□□□□□ -1.2
FAM49B-218ENST00000520887 CHL1O00533 1208 aa7.57□□□□□ -1.2
FAM49B-218ENST00000520887 FAM157BP0CG42 384 aa7.57□□□□□ -1.2
FAM49B-218ENST00000520887 EPXP11678 715 aa7.57□□□□□ -1.2
FAM49B-218ENST00000520887 CD33P20138 364 aa7.57□□□□□ -1.2
FAM49B-218ENST00000520887 IL6STP40189 918 aaPredicted RBP7.57□□□□□ -1.2
FAM49B-218ENST00000520887 EIF4A1P60842 406 aaKnown RBP7.57□□□□□ -1.2
FAM49B-218ENST00000520887 CLDN10P78369 228 aa7.57□□□□□ -1.2
FAM49B-218ENST00000520887 SUZ12Q15022 739 aaKnown RBP7.57□□□□□ -1.2
FAM49B-218ENST00000520887 PLA2G4EQ3MJ16 856 aa7.57□□□□□ -1.2
FAM49B-218ENST00000520887 TBCELQ5QJ74 424 aa7.57□□□□□ -1.2
FAM49B-218ENST00000520887 SAMD5Q5TGI4 173 aa7.57□□□□□ -1.2
FAM49B-218ENST00000520887 LINC00116Q8NCU8 138 aa7.57□□□□□ -1.2
FAM49B-218ENST00000520887 MTFR1LQ9H019 292 aa7.57□□□□□ -1.2
FAM49B-218ENST00000520887 MIS18AQ9NYP9 233 aa7.57□□□□□ -1.2
FAM49B-218ENST00000520887 MKRN1Q9UHC7 482 aaKnown RBP7.57□□□□□ -1.2
FAM49B-218ENST00000520887 HCN2Q9UL51 889 aa7.57□□□□□ -1.2
FAM49B-218ENST00000520887 ZNF232Q9UNY5 417 aa7.57□□□□□ -1.2
FAM49B-218ENST00000520887 KIAA1024Q9UPX6 916 aa7.57□□□□□ -1.2
FAM49B-218ENST00000520887 CT47B1P0C2W7 299 aaPredicted RBP7.56□□□□□ -1.2
FAM49B-218ENST00000520887 CYP19A1P11511 503 aaPredicted RBP7.56□□□□□ -1.2
FAM49B-218ENST00000520887 KCNQ4P56696 695 aa7.56□□□□□ -1.2
FAM49B-218ENST00000520887 ITPK1Q13572 414 aa7.56□□□□□ -1.2
FAM49B-218ENST00000520887 TWISTNBQ3B726 338 aaPredicted RBP7.56□□□□□ -1.2
FAM49B-218ENST00000520887 HSP90AB3PQ58FF7 597 aa7.56□□□□□ -1.2
FAM49B-218ENST00000520887 DUSP27Q5VZP5 1158 aa7.56□□□□□ -1.2
FAM49B-218ENST00000520887 NLGN1Q8N2Q7 840 aa7.56□□□□□ -1.2
FAM49B-218ENST00000520887 LARGE2Q8N3Y3 721 aa7.56□□□□□ -1.2
FAM49B-218ENST00000520887 OGFOD1Q8N543 542 aa7.56□□□□□ -1.2
FAM49B-218ENST00000520887 ZNF428Q96B54 188 aa7.56□□□□□ -1.2
FAM49B-218ENST00000520887 BTBD6Q96KE9 485 aa7.56□□□□□ -1.2
FAM49B-218ENST00000520887 ARID3AQ99856 593 aa7.56□□□□□ -1.2
FAM49B-218ENST00000520887 MARK1Q9P0L2 795 aa7.56□□□□□ -1.2
FAM49B-218ENST00000520887 DBF4Q9UBU7 674 aaPredicted RBP7.56□□□□□ -1.2
FAM49B-218ENST00000520887 ZBED9Q6R2W3 1325 aa7.55□□□□□ -1.2
FAM49B-218ENST00000520887 FANCIQ9NVI1 1328 aa7.55□□□□□ -1.2
FAM49B-218ENST00000520887 SERTM1A2A2V5 107 aa7.55□□□□□ -1.2
FAM49B-218ENST00000520887 PALM3A6NDB9 673 aaPredicted RBP7.55□□□□□ -1.2
FAM49B-218ENST00000520887 EML1O00423 815 aa7.55□□□□□ -1.2
FAM49B-218ENST00000520887 MYL6BP14649 208 aa7.55□□□□□ -1.2
FAM49B-218ENST00000520887 ADH6P28332 368 aa7.55□□□□□ -1.2
FAM49B-218ENST00000520887 ZNF827Q17R98 1081 aa7.55□□□□□ -1.2
FAM49B-218ENST00000520887 NEUROD4Q9HD90 331 aa7.55□□□□□ -1.2
FAM49B-218ENST00000520887 AVENQ9NQS1 362 aaPredicted RBP7.55□□□□□ -1.2
FAM49B-218ENST00000520887 HYPKQ9NX55 129 aa7.55□□□□□ -1.2
FAM49B-218ENST00000520887 PRR12Q9ULL5 1215 aa7.55□□□□□ -1.2
FAM49B-218ENST00000520887 ZBTB1Q9Y2K1 713 aa7.55□□□□□ -1.2
FAM49B-218ENST00000520887 UBR3Q6ZT12 1888 aa7.55□□□□□ -1.2
FAM49B-218ENST00000520887 PNPLA7Q6ZV29 1317 aa7.54□□□□□ -1.2
FAM49B-218ENST00000520887 MSTNO14793 375 aa7.54□□□□□ -1.2
FAM49B-218ENST00000520887 KCNQ3O43525 872 aa7.54□□□□□ -1.2
FAM49B-218ENST00000520887 HSP90B1P14625 803 aaKnown RBP7.54□□□□□ -1.2
FAM49B-218ENST00000520887 HOXB4P17483 251 aaPredicted RBP7.54□□□□□ -1.2
FAM49B-218ENST00000520887 NEXNQ0ZGT2 675 aa7.54□□□□□ -1.2
FAM49B-218ENST00000520887 LAMC2Q13753 1193 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms