RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 TESPA1A2RU30 521 aaPredicted RBP18.33■□□□□ 0.52
FBXO28-204ENST00000519894 IGF2BP3O00425 579 aaKnown RBP eCLIP18.33■□□□□ 0.52
FBXO28-204ENST00000519894 ENTPD3O75355 529 aa18.33■□□□□ 0.52
FBXO28-204ENST00000519894 WDHD1O75717 1129 aaPredicted RBP18.33■□□□□ 0.52
FBXO28-204ENST00000519894 RGS3P49796 1198 aa18.33■□□□□ 0.52
FBXO28-204ENST00000519894 MKRN4PQ13434 485 aaPredicted RBP18.33■□□□□ 0.52
FBXO28-204ENST00000519894 DGKZQ13574 1117 aa18.33■□□□□ 0.52
FBXO28-204ENST00000519894 PDE3AQ14432 1141 aa18.33■□□□□ 0.52
FBXO28-204ENST00000519894 ERC1Q8IUD2 1116 aa18.33■□□□□ 0.52
FBXO28-204ENST00000519894 ZNF341Q9BYN7 854 aa18.33■□□□□ 0.52
FBXO28-204ENST00000519894 RAI14Q9P0K7 980 aa18.33■□□□□ 0.52
FBXO28-204ENST00000519894 SNCAIPQ9Y6H5 919 aa18.33■□□□□ 0.52
FBXO28-204ENST00000519894 AK9Q5TCS8 1911 aa18.33■□□□□ 0.52
FBXO28-204ENST00000519894 ALDH1A1P00352 501 aa18.32■□□□□ 0.52
FBXO28-204ENST00000519894 CYP2E1P05181 493 aaPredicted RBP18.32■□□□□ 0.52
FBXO28-204ENST00000519894 LDHCP07864 332 aa18.32■□□□□ 0.52
FBXO28-204ENST00000519894 RHBDL3P58872 404 aa18.32■□□□□ 0.52
FBXO28-204ENST00000519894 GSTO1P78417 241 aa18.32■□□□□ 0.52
FBXO28-204ENST00000519894 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.32■□□□□ 0.52
FBXO28-204ENST00000519894 RHPN1Q8TCX5 695 aa18.32■□□□□ 0.52
FBXO28-204ENST00000519894 ZKSCAN4Q969J2 545 aaPredicted RBP18.32■□□□□ 0.52
FBXO28-204ENST00000519894 MS4A4AQ96JQ5 239 aa18.32■□□□□ 0.52
FBXO28-204ENST00000519894 PTPN18Q99952 460 aa18.32■□□□□ 0.52
FBXO28-204ENST00000519894 CHMP4BQ9H444 224 aaKnown RBP18.32■□□□□ 0.52
FBXO28-204ENST00000519894 DDX4Q9NQI0 724 aaKnown RBP18.32■□□□□ 0.52
FBXO28-204ENST00000519894 LRP2BPQ9P2M1 347 aa18.32■□□□□ 0.52
FBXO28-204ENST00000519894 ZNF112Q9UJU3 913 aa18.32■□□□□ 0.52
FBXO28-204ENST00000519894 SPDYE5A6NIY4 337 aa18.31■□□□□ 0.52
FBXO28-204ENST00000519894 GPR25O00155 361 aa18.31■□□□□ 0.52
FBXO28-204ENST00000519894 INPP5BP32019 993 aa18.31■□□□□ 0.52
FBXO28-204ENST00000519894 ZAP70P43403 619 aa18.31■□□□□ 0.52
FBXO28-204ENST00000519894 HSP90AB4PQ58FF6 505 aa18.31■□□□□ 0.52
FBXO28-204ENST00000519894 NOM1Q5C9Z4 860 aaKnown RBP18.31■□□□□ 0.52
FBXO28-204ENST00000519894 SH3BP5LQ7L8J4 393 aa18.31■□□□□ 0.52
FBXO28-204ENST00000519894 ZNF296Q8WUU4 475 aaPredicted RBP18.31■□□□□ 0.52
FBXO28-204ENST00000519894 AACSQ86V21 672 aa18.3■□□□□ 0.52
FBXO28-204ENST00000519894 ERO1BQ86YB8 467 aa18.3■□□□□ 0.52
FBXO28-204ENST00000519894 OTUD5Q96G74 571 aa18.3■□□□□ 0.52
FBXO28-204ENST00000519894 IL1RAPL2Q9NP60 686 aa18.3■□□□□ 0.52
FBXO28-204ENST00000519894 ATRNL1Q5VV63 1379 aa18.3■□□□□ 0.52
FBXO28-204ENST00000519894 DDTLA6NHG4 134 aaPredicted RBP18.29■□□□□ 0.52
FBXO28-204ENST00000519894 HMMRO75330 724 aa18.29■□□□□ 0.52
FBXO28-204ENST00000519894 PICALMQ13492 652 aa18.29■□□□□ 0.52
FBXO28-204ENST00000519894 PIH1D3Q9NQM4 214 aaKnown RBP18.29■□□□□ 0.52
FBXO28-204ENST00000519894 MYO5AQ9Y4I1 1855 aaKnown RBP18.29■□□□□ 0.52
FBXO28-204ENST00000519894 MAP4K4O95819 1239 aaPredicted RBP18.28■□□□□ 0.52
FBXO28-204ENST00000519894 SLURP2P0DP57 97 aa18.28■□□□□ 0.52
FBXO28-204ENST00000519894 GTF2A2P52657 109 aa18.28■□□□□ 0.52
FBXO28-204ENST00000519894 MAP3K10Q02779 954 aa18.28■□□□□ 0.52
FBXO28-204ENST00000519894 OTUD7BQ6GQQ9 843 aa18.28■□□□□ 0.52
FBXO28-204ENST00000519894 NAA16Q6N069 864 aaPredicted RBP18.28■□□□□ 0.52
FBXO28-204ENST00000519894 BRI3BPQ8WY22 251 aa18.28■□□□□ 0.52
FBXO28-204ENST00000519894 KIF1BPQ96EK5 621 aa18.28■□□□□ 0.52
FBXO28-204ENST00000519894 CCL15-CCL14A0A0B4J2E2 113 aa18.27■□□□□ 0.52
FBXO28-204ENST00000519894 APBB1O00213 710 aa18.27■□□□□ 0.52
FBXO28-204ENST00000519894 IRF6O14896 467 aa18.27■□□□□ 0.52
FBXO28-204ENST00000519894 CCL15Q16663 113 aa18.27■□□□□ 0.52
FBXO28-204ENST00000519894 CTU1Q7Z7A3 348 aaKnown RBP18.27■□□□□ 0.52
FBXO28-204ENST00000519894 ZSCAN29Q8IWY8 852 aaPredicted RBP18.27■□□□□ 0.52
FBXO28-204ENST00000519894 DOCK2Q92608 1830 aa18.27■□□□□ 0.52
FBXO28-204ENST00000519894 PHF20L1A8MW92 1017 aa18.26■□□□□ 0.51
FBXO28-204ENST00000519894 IGSF3O75054 1194 aa18.26■□□□□ 0.51
FBXO28-204ENST00000519894 FKTNO75072 461 aa18.26■□□□□ 0.51
FBXO28-204ENST00000519894 RAB11FIP3O75154 756 aa18.26■□□□□ 0.51
FBXO28-204ENST00000519894 PPATQ06203 517 aa18.26■□□□□ 0.51
FBXO28-204ENST00000519894 PPIL2Q13356 520 aa18.26■□□□□ 0.51
FBXO28-204ENST00000519894 NOL9Q5SY16 702 aaKnown RBP18.26■□□□□ 0.51
FBXO28-204ENST00000519894 ADGRA1Q86SQ6 560 aa18.26■□□□□ 0.51
FBXO28-204ENST00000519894 NDUFB9Q9Y6M9 179 aa18.26■□□□□ 0.51
FBXO28-204ENST00000519894 MAST2Q6P0Q8 1798 aa18.25■□□□□ 0.51
FBXO28-204ENST00000519894 PPP4CP60510 307 aa18.25■□□□□ 0.51
FBXO28-204ENST00000519894 CRHR2Q13324 411 aa18.25■□□□□ 0.51
FBXO28-204ENST00000519894 TEX11Q8IYF3 940 aa18.25■□□□□ 0.51
FBXO28-204ENST00000519894 CLASRPQ8N2M8 674 aaKnown RBP18.25■□□□□ 0.51
FBXO28-204ENST00000519894 SH3RF3Q8TEJ3 882 aaPredicted RBP18.25■□□□□ 0.51
FBXO28-204ENST00000519894 ANTXR1Q9H6X2 564 aa18.25■□□□□ 0.51
FBXO28-204ENST00000519894 AATFQ9NY61 560 aaKnown RBP eCLIP18.25■□□□□ 0.51
FBXO28-204ENST00000519894 CCDC85CA6NKD9 419 aa18.24■□□□□ 0.51
FBXO28-204ENST00000519894 BAG3O95817 575 aa18.24■□□□□ 0.51
FBXO28-204ENST00000519894 FAM43AQ8N2R8 423 aa18.24■□□□□ 0.51
FBXO28-204ENST00000519894 OSBPL5Q9H0X9 879 aaPredicted RBP18.24■□□□□ 0.51
FBXO28-204ENST00000519894 CETPP11597 493 aa18.23■□□□□ 0.51
FBXO28-204ENST00000519894 SNAPC2Q13487 334 aa18.23■□□□□ 0.51
FBXO28-204ENST00000519894 NOL10Q9BSC4 688 aaKnown RBP18.23■□□□□ 0.51
FBXO28-204ENST00000519894 KCNH4Q9UQ05 1017 aa18.23■□□□□ 0.51
FBXO28-204ENST00000519894 BTBD19C9JJ37 291 aa18.22■□□□□ 0.51
FBXO28-204ENST00000519894 TBC1D12O60347 775 aa18.22■□□□□ 0.51
FBXO28-204ENST00000519894 IDH1O75874 414 aaKnown RBP18.22■□□□□ 0.51
FBXO28-204ENST00000519894 IFIT2P09913 472 aaKnown RBP18.22■□□□□ 0.51
FBXO28-204ENST00000519894 CYP7A1P22680 504 aa18.22■□□□□ 0.51
FBXO28-204ENST00000519894 SCYL3Q8IZE3 742 aa18.22■□□□□ 0.51
FBXO28-204ENST00000519894 COL2A1P02458 1487 aaPredicted RBP18.21■□□□□ 0.51
FBXO28-204ENST00000519894 PLCG2P16885 1265 aa18.21■□□□□ 0.51
FBXO28-204ENST00000519894 DYNLL1P63167 89 aaKnown RBP18.21■□□□□ 0.51
FBXO28-204ENST00000519894 TAF1CQ15572 869 aaPredicted RBP18.21■□□□□ 0.51
FBXO28-204ENST00000519894 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.21■□□□□ 0.51
FBXO28-204ENST00000519894 TGFBRAP1Q8WUH2 860 aa18.21■□□□□ 0.51
FBXO28-204ENST00000519894 BCL11AQ9H165 835 aa18.21■□□□□ 0.51
FBXO28-204ENST00000519894 ZFYVE28Q9HCC9 887 aa18.21■□□□□ 0.51
FBXO28-204ENST00000519894 FAM196BA6NMK8 535 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms