RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 COPRSQ9NQ92 184 aa8.85□□□□□ -0.99
SQLE-203ENST00000518931 RAXQ9Y2V3 346 aa8.85□□□□□ -0.99
SQLE-203ENST00000518931 PCDHGC5Q9Y5F6 944 aa8.85□□□□□ -0.99
SQLE-203ENST00000518931 H2AFB1P0C5Y9 115 aa8.84□□□□□ -0.99
SQLE-203ENST00000518931 H2AFB2P0C5Z0 115 aa8.84□□□□□ -0.99
SQLE-203ENST00000518931 ZNF76P36508 570 aa8.84□□□□□ -0.99
SQLE-203ENST00000518931 PWP1Q13610 501 aa8.84□□□□□ -0.99
SQLE-203ENST00000518931 SEPT6Q14141 434 aa8.84□□□□□ -0.99
SQLE-203ENST00000518931 BEND4Q6ZU67 534 aa8.84□□□□□ -0.99
SQLE-203ENST00000518931 ERMP1Q7Z2K6 904 aa8.84□□□□□ -0.99
SQLE-203ENST00000518931 FANCD2OSQ96PS1 177 aa8.84□□□□□ -0.99
SQLE-203ENST00000518931 DISC1Q9NRI5 854 aa8.84□□□□□ -0.99
SQLE-203ENST00000518931 FAM105AQ9NUU6 356 aa8.84□□□□□ -0.99
SQLE-203ENST00000518931 KBTBD4Q9NVX7 518 aa8.84□□□□□ -0.99
SQLE-203ENST00000518931 STOML1Q9UBI4 398 aa8.84□□□□□ -0.99
SQLE-203ENST00000518931 HIF3AQ9Y2N7 669 aa8.84□□□□□ -0.99
SQLE-203ENST00000518931 CSADQ9Y600 493 aa8.84□□□□□ -0.99
SQLE-203ENST00000518931 DCDC2CA8MYV0 355 aa8.83□□□□□ -1
SQLE-203ENST00000518931 PF4P02776 101 aa8.83□□□□□ -1
SQLE-203ENST00000518931 MAP4P27816 1152 aaKnown RBP8.83□□□□□ -1
SQLE-203ENST00000518931 CAMK2GQ13555 558 aaPredicted RBP8.83□□□□□ -1
SQLE-203ENST00000518931 INPP5AQ14642 412 aa8.83□□□□□ -1
SQLE-203ENST00000518931 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.83□□□□□ -1
SQLE-203ENST00000518931 C12orf40Q86WS4 652 aa8.83□□□□□ -1
SQLE-203ENST00000518931 CLEC10AQ8IUN9 316 aa8.83□□□□□ -1
SQLE-203ENST00000518931 GAL3ST3Q96A11 431 aa8.83□□□□□ -1
SQLE-203ENST00000518931 CHMP4AQ9BY43 222 aa8.83□□□□□ -1
SQLE-203ENST00000518931 GSX1Q9H4S2 264 aaPredicted RBP8.83□□□□□ -1
SQLE-203ENST00000518931 SCAMP3O14828 347 aaKnown RBP8.82□□□□□ -1
SQLE-203ENST00000518931 DYRK3O43781 588 aa8.82□□□□□ -1
SQLE-203ENST00000518931 RAB6AP20340 208 aa8.82□□□□□ -1
SQLE-203ENST00000518931 FANCCQ00597 558 aa8.82□□□□□ -1
SQLE-203ENST00000518931 TRIM42Q8IWZ5 723 aa8.82□□□□□ -1
SQLE-203ENST00000518931 RNF34Q969K3 372 aa8.82□□□□□ -1
SQLE-203ENST00000518931 ATXN3LQ9H3M9 355 aa8.82□□□□□ -1
SQLE-203ENST00000518931 SEMA6BQ9H3T3 888 aa8.82□□□□□ -1
SQLE-203ENST00000518931 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.81□□□□□ -1
SQLE-203ENST00000518931 HMX2A2RU54 273 aa8.81□□□□□ -1
SQLE-203ENST00000518931 RNGTTO60942 597 aaKnown RBP8.81□□□□□ -1
SQLE-203ENST00000518931 NFICP08651 508 aa8.81□□□□□ -1
SQLE-203ENST00000518931 CDK8P49336 464 aa8.81□□□□□ -1
SQLE-203ENST00000518931 ERVK-24P63145 666 aa8.81□□□□□ -1
SQLE-203ENST00000518931 LMNB2Q03252 620 aa8.81□□□□□ -1
SQLE-203ENST00000518931 TTLL4Q14679 1199 aa8.81□□□□□ -1
SQLE-203ENST00000518931 NFKBIBQ15653 356 aa8.81□□□□□ -1
SQLE-203ENST00000518931 ELMO3Q96BJ8 720 aa8.81□□□□□ -1
SQLE-203ENST00000518931 FAM83CQ9BQN1 747 aa8.81□□□□□ -1
SQLE-203ENST00000518931 YIPF2Q9BWQ6 316 aa8.81□□□□□ -1
SQLE-203ENST00000518931 PIDD1Q9HB75 910 aa8.81□□□□□ -1
SQLE-203ENST00000518931 METTL5Q9NRN9 209 aaKnown RBP8.81□□□□□ -1
SQLE-203ENST00000518931 FAM95CA0A1B0GW59 222 aa8.8□□□□□ -1
SQLE-203ENST00000518931 FAM160A1Q05DH4 1040 aa8.8□□□□□ -1
SQLE-203ENST00000518931 PPM1JQ5JR12 505 aa8.8□□□□□ -1
SQLE-203ENST00000518931 LRFN4Q6PJG9 635 aa8.8□□□□□ -1
SQLE-203ENST00000518931 BNC2Q6ZN30 1099 aaPredicted RBP8.8□□□□□ -1
SQLE-203ENST00000518931 HDXQ7Z353 690 aa8.8□□□□□ -1
SQLE-203ENST00000518931 RHOVQ96L33 236 aa8.8□□□□□ -1
SQLE-203ENST00000518931 ACSS3Q9H6R3 686 aa8.8□□□□□ -1
SQLE-203ENST00000518931 C7orf69Q9H7B7 122 aa8.8□□□□□ -1
SQLE-203ENST00000518931 LGR6Q9HBX8 967 aa8.8□□□□□ -1
SQLE-203ENST00000518931 PICK1Q9NRD5 415 aa8.8□□□□□ -1
SQLE-203ENST00000518931 HCLS1P14317 486 aaPredicted RBP8.79□□□□□ -1
SQLE-203ENST00000518931 RNF214Q8ND24 703 aa8.79□□□□□ -1
SQLE-203ENST00000518931 EZH1Q92800 747 aaPredicted RBP8.79□□□□□ -1
SQLE-203ENST00000518931 PLPPR2Q96GM1 343 aa8.79□□□□□ -1
SQLE-203ENST00000518931 SEMA6CQ9H3T2 930 aa8.79□□□□□ -1
SQLE-203ENST00000518931 DAGLAQ9Y4D2 1042 aa8.79□□□□□ -1
SQLE-203ENST00000518931 SNCAIPQ9Y6H5 919 aa8.79□□□□□ -1
SQLE-203ENST00000518931 F13A1P00488 732 aa8.78□□□□□ -1
SQLE-203ENST00000518931 EIF4A3P38919 411 aaKnown RBP8.78□□□□□ -1
SQLE-203ENST00000518931 RING1Q06587 406 aa8.78□□□□□ -1
SQLE-203ENST00000518931 WIPI1Q5MNZ9 446 aaPredicted RBP8.78□□□□□ -1
SQLE-203ENST00000518931 SNAP47Q5SQN1 464 aa8.78□□□□□ -1
SQLE-203ENST00000518931 C9orf131Q5VYM1 1079 aa8.78□□□□□ -1
SQLE-203ENST00000518931 FBXL19Q6PCT2 694 aa8.78□□□□□ -1
SQLE-203ENST00000518931 CCDC84Q86UT8 332 aaPredicted RBP8.78□□□□□ -1
SQLE-203ENST00000518931 SMYD4Q8IYR2 804 aaPredicted RBP8.78□□□□□ -1
SQLE-203ENST00000518931 GOLM1Q8NBJ4 401 aa8.78□□□□□ -1
SQLE-203ENST00000518931 SSU72Q9NP77 194 aaKnown RBP8.78□□□□□ -1
SQLE-203ENST00000518931 K7ELQ4 463 aaPredicted RBP8.77□□□□□ -1.01
SQLE-203ENST00000518931 NEFMP07197 916 aa8.77□□□□□ -1.01
SQLE-203ENST00000518931 MAP7Q14244 749 aa8.77□□□□□ -1.01
SQLE-203ENST00000518931 DIEXFQ68CQ4 756 aaKnown RBP8.77□□□□□ -1.01
SQLE-203ENST00000518931 PAOXQ6QHF9 649 aa8.77□□□□□ -1.01
SQLE-203ENST00000518931 CYFIP1Q7L576 1253 aa8.77□□□□□ -1.01
SQLE-203ENST00000518931 GATAD2BQ8WXI9 593 aa8.77□□□□□ -1.01
SQLE-203ENST00000518931 PRAMEF27A3QJZ7 478 aa8.76□□□□□ -1.01
SQLE-203ENST00000518931 FAM221AA4D161 298 aa8.76□□□□□ -1.01
SQLE-203ENST00000518931 GFRA2O00451 464 aa8.76□□□□□ -1.01
SQLE-203ENST00000518931 FSTP19883 344 aa8.76□□□□□ -1.01
SQLE-203ENST00000518931 GARTP22102 1010 aa8.76□□□□□ -1.01
SQLE-203ENST00000518931 HDLBPQ00341 1268 aaKnown RBP8.76□□□□□ -1.01
SQLE-203ENST00000518931 RPL6Q02878 288 aaKnown RBP8.76□□□□□ -1.01
SQLE-203ENST00000518931 ZNF394Q53GI3 561 aa8.76□□□□□ -1.01
SQLE-203ENST00000518931 USP48Q86UV5 1035 aa8.76□□□□□ -1.01
SQLE-203ENST00000518931 ZNF296Q8WUU4 475 aaPredicted RBP8.76□□□□□ -1.01
SQLE-203ENST00000518931 ADAMTS1Q9UHI8 967 aa8.76□□□□□ -1.01
SQLE-203ENST00000518931 PCOLCE2Q9UKZ9 415 aa8.76□□□□□ -1.01
SQLE-203ENST00000518931 E9PSI1 815 aa8.75□□□□□ -1.01
SQLE-203ENST00000518931 DYNC1LI2O43237 492 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms