RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 ELOA2Q8IYF1 753 aaPredicted RBP9.39□□□□□ -0.91
ARFGEF1-204ENST00000518290 ZSWIM5Q9P217 1185 aa9.39□□□□□ -0.91
ARFGEF1-204ENST00000518290 CFAP45Q9UL16 551 aa9.39□□□□□ -0.91
ARFGEF1-204ENST00000518290 SLC4A4Q9Y6R1 1079 aa9.39□□□□□ -0.91
ARFGEF1-204ENST00000518290 KLF18A0A0U1RQI7 1052 aa9.39□□□□□ -0.91
ARFGEF1-204ENST00000518290 YEATS4O95619 227 aa9.39□□□□□ -0.91
ARFGEF1-204ENST00000518290 CYP7A1P22680 504 aa9.39□□□□□ -0.91
ARFGEF1-204ENST00000518290 GSTO1P78417 241 aa9.39□□□□□ -0.91
ARFGEF1-204ENST00000518290 GPSM2P81274 684 aa9.39□□□□□ -0.91
ARFGEF1-204ENST00000518290 FUT2Q10981 343 aa9.39□□□□□ -0.91
ARFGEF1-204ENST00000518290 CTR9Q6PD62 1173 aa9.39□□□□□ -0.91
ARFGEF1-204ENST00000518290 ZNF804AQ7Z570 1209 aa9.39□□□□□ -0.91
ARFGEF1-204ENST00000518290 RTFDC1Q9BY42 306 aaPredicted RBP9.39□□□□□ -0.91
ARFGEF1-204ENST00000518290 MROH7-TTC4A0A0A0MT08 1334 aa9.39□□□□□ -0.91
ARFGEF1-204ENST00000518290 MYO3BQ8WXR4 1341 aa9.39□□□□□ -0.91
ARFGEF1-204ENST00000518290 A0A1W2PQ27 194 aa9.38□□□□□ -0.91
ARFGEF1-204ENST00000518290 A0A1W2PQ64 194 aa9.38□□□□□ -0.91
ARFGEF1-204ENST00000518290 A0A1W2PQD8 194 aa9.38□□□□□ -0.91
ARFGEF1-204ENST00000518290 WTIPA6NIX2 430 aaPredicted RBP9.38□□□□□ -0.91
ARFGEF1-204ENST00000518290 DDAH1O94760 285 aa9.38□□□□□ -0.91
ARFGEF1-204ENST00000518290 NLGN1Q8N2Q7 840 aa9.38□□□□□ -0.91
ARFGEF1-204ENST00000518290 CHAMP1Q96JM3 812 aa9.38□□□□□ -0.91
ARFGEF1-204ENST00000518290 MRIQ9BWK5 157 aa9.38□□□□□ -0.91
ARFGEF1-204ENST00000518290 LRP2BPQ9P2M1 347 aa9.38□□□□□ -0.91
ARFGEF1-204ENST00000518290 ATP6V0A2Q9Y487 856 aa9.38□□□□□ -0.91
ARFGEF1-204ENST00000518290 FAM182BQ5T319 152 aa9.38□□□□□ -0.91
ARFGEF1-204ENST00000518290 MFSD6Q6ZSS7 791 aa9.38□□□□□ -0.91
ARFGEF1-204ENST00000518290 SCN9AQ15858 1988 aa9.38□□□□□ -0.91
ARFGEF1-204ENST00000518290 GPR75-ASB3A0A0A6YYF3 556 aa9.38□□□□□ -0.91
ARFGEF1-204ENST00000518290 GOLGA8BA8MQT2 603 aa9.38□□□□□ -0.91
ARFGEF1-204ENST00000518290 PRKAB2O43741 272 aa9.38□□□□□ -0.91
ARFGEF1-204ENST00000518290 CCDC173Q0VFZ6 552 aa9.38□□□□□ -0.91
ARFGEF1-204ENST00000518290 SMIM5Q71RC9 77 aa9.38□□□□□ -0.91
ARFGEF1-204ENST00000518290 TXNRD3Q86VQ6 643 aa9.38□□□□□ -0.91
ARFGEF1-204ENST00000518290 DCP1AQ9NPI6 582 aaPredicted RBP9.38□□□□□ -0.91
ARFGEF1-204ENST00000518290 FAM177BA6PVY3 158 aa9.37□□□□□ -0.91
ARFGEF1-204ENST00000518290 RANBP6O60518 1105 aaKnown RBP9.37□□□□□ -0.91
ARFGEF1-204ENST00000518290 SRGNP10124 158 aa9.37□□□□□ -0.91
ARFGEF1-204ENST00000518290 NPR1P16066 1061 aa9.37□□□□□ -0.91
ARFGEF1-204ENST00000518290 CDC27P30260 824 aa9.37□□□□□ -0.91
ARFGEF1-204ENST00000518290 HAND2P61296 217 aa9.37□□□□□ -0.91
ARFGEF1-204ENST00000518290 KIF23Q02241 960 aaPredicted RBP9.37□□□□□ -0.91
ARFGEF1-204ENST00000518290 STYK1Q6J9G0 422 aa9.37□□□□□ -0.91
ARFGEF1-204ENST00000518290 ENGASEQ8NFI3 743 aa9.37□□□□□ -0.91
ARFGEF1-204ENST00000518290 TBC1D22AQ8WUA7 517 aa9.37□□□□□ -0.91
ARFGEF1-204ENST00000518290 PGBD1Q96JS3 809 aa9.37□□□□□ -0.91
ARFGEF1-204ENST00000518290 LRRC2Q9BYS8 371 aa9.37□□□□□ -0.91
ARFGEF1-204ENST00000518290 GPHNQ9NQX3 736 aaPredicted RBP9.37□□□□□ -0.91
ARFGEF1-204ENST00000518290 DDX19AQ9NUU7 478 aaKnown RBP9.37□□□□□ -0.91
ARFGEF1-204ENST00000518290 FER1L6Q2WGJ9 1857 aa9.37□□□□□ -0.91
ARFGEF1-204ENST00000518290 B4E1Z4 1266 aa9.37□□□□□ -0.91
ARFGEF1-204ENST00000518290 HSP90AA2PQ14568 343 aaPredicted RBP9.37□□□□□ -0.91
ARFGEF1-204ENST00000518290 CRNKL1Q9BZJ0 848 aaKnown RBP9.37□□□□□ -0.91
ARFGEF1-204ENST00000518290 EP400Q96L91 3159 aa9.37□□□□□ -0.91
ARFGEF1-204ENST00000518290 TRIM37O94972 964 aa9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 CALM1P0DP23 149 aa9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 CALM2P0DP24 149 aa9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 CALM3P0DP25 149 aa9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 METAP2P50579 478 aaKnown RBP eCLIP9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 TBC1D16Q8TBP0 767 aa9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 WASF1Q92558 559 aa9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 ESR2Q92731 530 aa9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 ZNF396Q96N95 335 aaPredicted RBP9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 RBSNQ9H1K0 784 aa9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 CLSTN2Q9H4D0 955 aa9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 RBM28Q9NW13 759 aaKnown RBP9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 ZBTB43O43298 467 aa9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 NCLP19338 710 aaKnown RBP9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 STK3Q13188 491 aa9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 CCDC178Q5BJE1 867 aa9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 BICDL1Q6ZP65 573 aa9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 COL23A1Q86Y22 540 aaPredicted RBP9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 RPGRQ92834 1020 aaKnown RBP9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 RNF26Q9BY78 433 aaPredicted RBP9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 NCOA5Q9HCD5 579 aaKnown RBP9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 CD209Q9NNX6 404 aa9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 RBM27Q9P2N5 1060 aaKnown RBP9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 VPS37CA5D8V6 355 aaPredicted RBP9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 NPM3O75607 178 aaKnown RBP9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 GTF2E1P29083 439 aaPredicted RBP9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 CTDSPL2Q05D32 466 aa9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 C12orf60Q5U649 245 aa9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 COA1Q9GZY4 146 aa9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 SENP2Q9HC62 589 aa9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 GGA1Q9UJY5 639 aa9.36□□□□□ -0.91
ARFGEF1-204ENST00000518290 CCDC196A0A1B0GTZ2 297 aa9.35□□□□□ -0.91
ARFGEF1-204ENST00000518290 PPP6R2O75170 966 aa9.35□□□□□ -0.91
ARFGEF1-204ENST00000518290 CAVIN2O95810 425 aa9.35□□□□□ -0.91
ARFGEF1-204ENST00000518290 SNW1Q13573 536 aaKnown RBP9.35□□□□□ -0.91
ARFGEF1-204ENST00000518290 SART3Q15020 963 aaKnown RBP9.35□□□□□ -0.91
ARFGEF1-204ENST00000518290 TMEM67Q5HYA8 995 aa9.35□□□□□ -0.91
ARFGEF1-204ENST00000518290 ZSCAN10Q96SZ4 725 aaPredicted RBP9.35□□□□□ -0.91
ARFGEF1-204ENST00000518290 TSPY26PQ9H489 355 aa9.35□□□□□ -0.91
ARFGEF1-204ENST00000518290 PPEF1O14829 653 aaPredicted RBP9.35□□□□□ -0.91
ARFGEF1-204ENST00000518290 RRP9O43818 475 aaKnown RBP9.35□□□□□ -0.91
ARFGEF1-204ENST00000518290 PRDX5P30044 214 aa9.35□□□□□ -0.91
ARFGEF1-204ENST00000518290 TDO2P48775 406 aa9.35□□□□□ -0.91
ARFGEF1-204ENST00000518290 GRIPAP1Q4V328 841 aa9.35□□□□□ -0.91
ARFGEF1-204ENST00000518290 ENAHQ8N8S7 591 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms