RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 CCDC87Q9NVE4 849 aa8.67□□□□□ -1.02
CPS1-210ENST00000518043 DDX19BQ9UMR2 479 aa8.67□□□□□ -1.02
CPS1-210ENST00000518043 MAP3K2Q9Y2U5 619 aa8.67□□□□□ -1.02
CPS1-210ENST00000518043 TTLL8A6PVC2 850 aa8.66□□□□□ -1.02
CPS1-210ENST00000518043 LGR5O75473 907 aa8.66□□□□□ -1.02
CPS1-210ENST00000518043 STARD3NLO95772 234 aa8.66□□□□□ -1.02
CPS1-210ENST00000518043 CCT4P50991 539 aaKnown RBP8.66□□□□□ -1.02
CPS1-210ENST00000518043 PDE4CQ08493 712 aa8.66□□□□□ -1.02
CPS1-210ENST00000518043 SLC27A3Q5K4L6 730 aa8.66□□□□□ -1.02
CPS1-210ENST00000518043 ZSCAN10Q96SZ4 725 aaPredicted RBP8.66□□□□□ -1.02
CPS1-210ENST00000518043 CASZ1Q86V15 1759 aa8.66□□□□□ -1.02
CPS1-210ENST00000518043 COL15A1P39059 1388 aa8.65□□□□□ -1.02
CPS1-210ENST00000518043 IL6STP40189 918 aaPredicted RBP8.65□□□□□ -1.02
CPS1-210ENST00000518043 AIMP1Q12904 312 aaKnown RBP8.65□□□□□ -1.02
CPS1-210ENST00000518043 SLC4A10Q6U841 1118 aa8.65□□□□□ -1.02
CPS1-210ENST00000518043 SMIM5Q71RC9 77 aa8.65□□□□□ -1.02
CPS1-210ENST00000518043 SIRT2Q8IXJ6 389 aa8.65□□□□□ -1.02
CPS1-210ENST00000518043 PLBD2Q8NHP8 589 aa8.65□□□□□ -1.02
CPS1-210ENST00000518043 RNF217Q8TC41 542 aa8.65□□□□□ -1.02
CPS1-210ENST00000518043 CLP1Q92989 425 aaKnown RBP8.65□□□□□ -1.02
CPS1-210ENST00000518043 METTL22Q9BUU2 404 aaPredicted RBP8.65□□□□□ -1.02
CPS1-210ENST00000518043 GRIP2Q9C0E4 1043 aa8.65□□□□□ -1.02
CPS1-210ENST00000518043 USP44Q9H0E7 712 aa8.65□□□□□ -1.02
CPS1-210ENST00000518043 SCHIP1Q9P0W5 487 aaPredicted RBP8.65□□□□□ -1.02
CPS1-210ENST00000518043 CCNL1Q9UK58 526 aaPredicted RBP8.65□□□□□ -1.02
CPS1-210ENST00000518043 LAMB2P55268 1798 aa8.65□□□□□ -1.02
CPS1-210ENST00000518043 QSER1Q2KHR3 1735 aa8.65□□□□□ -1.03
CPS1-210ENST00000518043 UTYO14607 1347 aa8.64□□□□□ -1.03
CPS1-210ENST00000518043 MAP3K15Q6ZN16 1313 aa8.64□□□□□ -1.03
CPS1-210ENST00000518043 NEURL1BA8MQ27 555 aa8.64□□□□□ -1.03
CPS1-210ENST00000518043 CDK2AP1O14519 115 aa8.64□□□□□ -1.03
CPS1-210ENST00000518043 ALDH1L1O75891 902 aa8.64□□□□□ -1.03
CPS1-210ENST00000518043 CAMTA2O94983 1202 aa8.64□□□□□ -1.03
CPS1-210ENST00000518043 IGHDP01880 384 aa8.64□□□□□ -1.03
CPS1-210ENST00000518043 CASP7P55210 303 aa8.64□□□□□ -1.03
CPS1-210ENST00000518043 FOXK2Q01167 660 aa8.64□□□□□ -1.03
CPS1-210ENST00000518043 AAMPQ13685 434 aa8.64□□□□□ -1.03
CPS1-210ENST00000518043 CWF19L2Q2TBE0 894 aaKnown RBP8.64□□□□□ -1.03
CPS1-210ENST00000518043 LINS1Q8NG48 757 aa8.64□□□□□ -1.03
CPS1-210ENST00000518043 KAZALD1Q96I82 304 aa8.64□□□□□ -1.03
CPS1-210ENST00000518043 ISCA1Q9BUE6 129 aa8.64□□□□□ -1.03
CPS1-210ENST00000518043 SRCIN1Q9C0H9 1055 aa8.64□□□□□ -1.03
CPS1-210ENST00000518043 TSPAN10Q9H1Z9 355 aaPredicted RBP8.64□□□□□ -1.03
CPS1-210ENST00000518043 IQSEC3Q9UPP2 1182 aaPredicted RBP8.64□□□□□ -1.03
CPS1-210ENST00000518043 USP3Q9Y6I4 520 aa8.64□□□□□ -1.03
CPS1-210ENST00000518043 DDX60Q8IY21 1712 aaKnown RBP8.63□□□□□ -1.03
CPS1-210ENST00000518043 FIGNL2A6NMB9 653 aa8.63□□□□□ -1.03
CPS1-210ENST00000518043 PLSCR1O15162 318 aa8.63□□□□□ -1.03
CPS1-210ENST00000518043 NBPF7P0C2Y1 421 aaPredicted RBP8.63□□□□□ -1.03
CPS1-210ENST00000518043 GTF2E1P29083 439 aaPredicted RBP8.63□□□□□ -1.03
CPS1-210ENST00000518043 HLFQ16534 295 aa8.63□□□□□ -1.03
CPS1-210ENST00000518043 TXNRD1Q16881 649 aa8.63□□□□□ -1.03
CPS1-210ENST00000518043 TMEM214Q6NUQ4 689 aaKnown RBP8.63□□□□□ -1.03
CPS1-210ENST00000518043 SLC9A9Q8IVB4 645 aa8.63□□□□□ -1.03
CPS1-210ENST00000518043 MYD88Q99836 296 aa8.63□□□□□ -1.03
CPS1-210ENST00000518043 SENP2Q9HC62 589 aa8.63□□□□□ -1.03
CPS1-210ENST00000518043 PRMT3O60678 531 aa8.62□□□□□ -1.03
CPS1-210ENST00000518043 DDX58O95786 925 aaKnown RBP8.62□□□□□ -1.03
CPS1-210ENST00000518043 HDAC1Q13547 482 aaPredicted RBP8.62□□□□□ -1.03
CPS1-210ENST00000518043 GCKRQ14397 625 aa8.62□□□□□ -1.03
CPS1-210ENST00000518043 ZNF827Q17R98 1081 aa8.62□□□□□ -1.03
CPS1-210ENST00000518043 TBCELQ5QJ74 424 aa8.62□□□□□ -1.03
CPS1-210ENST00000518043 CEP85Q6P2H3 762 aa8.62□□□□□ -1.03
CPS1-210ENST00000518043 LYSMD3Q7Z3D4 306 aa8.62□□□□□ -1.03
CPS1-210ENST00000518043 PRICKLE2Q7Z3G6 844 aa8.62□□□□□ -1.03
CPS1-210ENST00000518043 RHBDD1Q8TEB9 315 aa8.62□□□□□ -1.03
CPS1-210ENST00000518043 SCG3Q8WXD2 468 aaKnown RBP8.62□□□□□ -1.03
CPS1-210ENST00000518043 PRIMPOLQ96LW4 560 aa8.62□□□□□ -1.03
CPS1-210ENST00000518043 GMPR2Q9P2T1 348 aaKnown RBP8.62□□□□□ -1.03
CPS1-210ENST00000518043 DNMT3LQ9UJW3 386 aa8.62□□□□□ -1.03
CPS1-210ENST00000518043 MYH3P11055 1940 aa8.62□□□□□ -1.03
CPS1-210ENST00000518043 UBN2Q6ZU65 1347 aa8.61□□□□□ -1.03
CPS1-210ENST00000518043 ERVV-1B6SEH8 477 aa8.61□□□□□ -1.03
CPS1-210ENST00000518043 C21orf2O43822 256 aa8.61□□□□□ -1.03
CPS1-210ENST00000518043 RPS6KA4O75676 772 aa8.61□□□□□ -1.03
CPS1-210ENST00000518043 WEE1P30291 646 aa8.61□□□□□ -1.03
CPS1-210ENST00000518043 TRIM28Q13263 835 aaKnown RBP8.61□□□□□ -1.03
CPS1-210ENST00000518043 TCIRG1Q13488 830 aa8.61□□□□□ -1.03
CPS1-210ENST00000518043 OCLNQ16625 522 aa8.61□□□□□ -1.03
CPS1-210ENST00000518043 GNASQ5JWF2 1037 aa8.61□□□□□ -1.03
CPS1-210ENST00000518043 SKAP1Q86WV1 359 aa8.61□□□□□ -1.03
CPS1-210ENST00000518043 ZNF34Q8IZ26 560 aa8.61□□□□□ -1.03
CPS1-210ENST00000518043 ANKRD44Q8N8A2 993 aa8.61□□□□□ -1.03
CPS1-210ENST00000518043 KIFC2Q96AC6 838 aa8.61□□□□□ -1.03
CPS1-210ENST00000518043 CCDC136Q96JN2 1154 aa8.61□□□□□ -1.03
CPS1-210ENST00000518043 TRIM47Q96LD4 638 aa8.61□□□□□ -1.03
CPS1-210ENST00000518043 CAMKK2Q96RR4 588 aa8.61□□□□□ -1.03
CPS1-210ENST00000518043 TRAIPQ9BWF2 469 aa8.61□□□□□ -1.03
CPS1-210ENST00000518043 COL4A1P02462 1669 aa8.61□□□□□ -1.03
CPS1-210ENST00000518043 TNRC6CQ9HCJ0 1690 aaKnown RBP8.6□□□□□ -1.03
CPS1-210ENST00000518043 SPATA31C2B4DYI2 1134 aa8.6□□□□□ -1.03
CPS1-210ENST00000518043 H7C1W4 665 aa8.6□□□□□ -1.03
CPS1-210ENST00000518043 GRM8O00222 908 aa8.6□□□□□ -1.03
CPS1-210ENST00000518043 MAN1A2O60476 641 aa8.6□□□□□ -1.03
CPS1-210ENST00000518043 APBA3O96018 575 aa8.6□□□□□ -1.03
CPS1-210ENST00000518043 PDIA4P13667 645 aaKnown RBP8.6□□□□□ -1.03
CPS1-210ENST00000518043 IGFBP4P22692 258 aa8.6□□□□□ -1.03
CPS1-210ENST00000518043 ATP2B4P23634 1241 aa8.6□□□□□ -1.03
CPS1-210ENST00000518043 EPHA10Q5JZY3 1008 aa8.6□□□□□ -1.03
CPS1-210ENST00000518043 ZNF295-AS1Q8N0V1 137 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms