RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 MINDY4BA8MYZ0 360 aa13.82□□□□□ -0.2
SPIDR-203ENST00000517693 IFIT3O14879 490 aaKnown RBP13.82□□□□□ -0.2
SPIDR-203ENST00000517693 DYNLL1P63167 89 aaKnown RBP13.82□□□□□ -0.2
SPIDR-203ENST00000517693 CTDSPL2Q05D32 466 aa13.82□□□□□ -0.2
SPIDR-203ENST00000517693 PDE4BQ07343 736 aa13.82□□□□□ -0.2
SPIDR-203ENST00000517693 PPP2R5BQ15173 497 aa13.82□□□□□ -0.2
SPIDR-203ENST00000517693 FOXD4L5Q5VV16 416 aaPredicted RBP13.82□□□□□ -0.2
SPIDR-203ENST00000517693 IQCA1Q86XH1 822 aa13.82□□□□□ -0.2
SPIDR-203ENST00000517693 FOXD4L4Q8WXT5 416 aaPredicted RBP13.82□□□□□ -0.2
SPIDR-203ENST00000517693 SYAP1Q96A49 352 aaPredicted RBP13.82□□□□□ -0.2
SPIDR-203ENST00000517693 LMBRD1Q9NUN5 540 aa13.82□□□□□ -0.2
SPIDR-203ENST00000517693 CCDC196A0A1B0GTZ2 297 aa13.81□□□□□ -0.2
SPIDR-203ENST00000517693 KDM4AO75164 1064 aa13.81□□□□□ -0.2
SPIDR-203ENST00000517693 USP5P45974 858 aa13.81□□□□□ -0.2
SPIDR-203ENST00000517693 METAP2P50579 478 aaKnown RBP eCLIP13.81□□□□□ -0.2
SPIDR-203ENST00000517693 MFSD14BQ5SR56 506 aa13.81□□□□□ -0.2
SPIDR-203ENST00000517693 SUPT20HQ8NEM7 779 aa13.81□□□□□ -0.2
SPIDR-203ENST00000517693 ZNF384Q8TF68 577 aa13.81□□□□□ -0.2
SPIDR-203ENST00000517693 ZNF287Q9HBT7 754 aa13.81□□□□□ -0.2
SPIDR-203ENST00000517693 DCP1AQ9NPI6 582 aaPredicted RBP13.81□□□□□ -0.2
SPIDR-203ENST00000517693 SLC12A7Q9Y666 1083 aa13.81□□□□□ -0.2
SPIDR-203ENST00000517693 NID2Q14112 1375 aa13.81□□□□□ -0.2
SPIDR-203ENST00000517693 ZBTB43O43298 467 aa13.8□□□□□ -0.2
SPIDR-203ENST00000517693 CCT2P78371 535 aaKnown RBP13.8□□□□□ -0.2
SPIDR-203ENST00000517693 KRT85P78386 507 aa13.8□□□□□ -0.2
SPIDR-203ENST00000517693 WTAPQ15007 396 aa13.8□□□□□ -0.2
SPIDR-203ENST00000517693 RRP12Q5JTH9 1297 aaKnown RBP13.8□□□□□ -0.2
SPIDR-203ENST00000517693 CYB5R4Q7L1T6 521 aa13.8□□□□□ -0.2
SPIDR-203ENST00000517693 FAM163AQ96GL9 167 aaPredicted RBP13.8□□□□□ -0.2
SPIDR-203ENST00000517693 ZSWIM5Q9P217 1185 aa13.8□□□□□ -0.2
SPIDR-203ENST00000517693 ORC4O43929 436 aa13.8□□□□□ -0.2
SPIDR-203ENST00000517693 PRPF40AO75400 957 aaKnown RBP13.8□□□□□ -0.2
SPIDR-203ENST00000517693 FGRP09769 529 aa13.8□□□□□ -0.2
SPIDR-203ENST00000517693 DEKP35659 375 aaKnown RBP13.8□□□□□ -0.2
SPIDR-203ENST00000517693 CCDC178Q5BJE1 867 aa13.8□□□□□ -0.2
SPIDR-203ENST00000517693 APOA5Q6Q788 366 aa13.8□□□□□ -0.2
SPIDR-203ENST00000517693 PODNQ7Z5L7 613 aa13.8□□□□□ -0.2
SPIDR-203ENST00000517693 IGDCC4Q8TDY8 1250 aa13.8□□□□□ -0.2
SPIDR-203ENST00000517693 LY9Q9HBG7 655 aa13.8□□□□□ -0.2
SPIDR-203ENST00000517693 JAK2O60674 1132 aa13.79□□□□□ -0.2
SPIDR-203ENST00000517693 L1TD1Q5T7N2 865 aaKnown RBP13.79□□□□□ -0.2
SPIDR-203ENST00000517693 ATL3Q6DD88 541 aa13.79□□□□□ -0.2
SPIDR-203ENST00000517693 CTR9Q6PD62 1173 aa13.79□□□□□ -0.2
SPIDR-203ENST00000517693 C10orf71Q711Q0 1435 aa13.79□□□□□ -0.2
SPIDR-203ENST00000517693 ROBO3Q96MS0 1386 aa13.79□□□□□ -0.2
SPIDR-203ENST00000517693 GOLGA8AA7E2F4 631 aa13.78□□□□□ -0.2
SPIDR-203ENST00000517693 USP17L12C9JPN9 530 aa13.78□□□□□ -0.2
SPIDR-203ENST00000517693 USP17L21D6R901 530 aa13.78□□□□□ -0.2
SPIDR-203ENST00000517693 FKBP1AP62942 108 aaKnown RBP13.78□□□□□ -0.2
SPIDR-203ENST00000517693 WASF1Q92558 559 aa13.78□□□□□ -0.2
SPIDR-203ENST00000517693 GPR101Q96P66 508 aaPredicted RBP13.78□□□□□ -0.2
SPIDR-203ENST00000517693 SCAND2PQ9GZW5 306 aaPredicted RBP13.78□□□□□ -0.2
SPIDR-203ENST00000517693 BRPF3Q9ULD4 1205 aa13.78□□□□□ -0.2
SPIDR-203ENST00000517693 JAG2Q9Y219 1238 aa13.78□□□□□ -0.2
SPIDR-203ENST00000517693 GAKO14976 1311 aa13.78□□□□□ -0.2
SPIDR-203ENST00000517693 MYH2Q9UKX2 1941 aa13.78□□□□□ -0.2
SPIDR-203ENST00000517693 GPR75-ASB3A0A0A6YYF3 556 aa13.78□□□□□ -0.2
SPIDR-203ENST00000517693 CALM1P0DP23 149 aa13.78□□□□□ -0.2
SPIDR-203ENST00000517693 CALM2P0DP24 149 aa13.78□□□□□ -0.2
SPIDR-203ENST00000517693 CALM3P0DP25 149 aa13.78□□□□□ -0.2
SPIDR-203ENST00000517693 CDC37L1Q7L3B6 337 aa13.78□□□□□ -0.2
SPIDR-203ENST00000517693 NAV1Q8NEY1 1877 aa13.78□□□□□ -0.2
SPIDR-203ENST00000517693 DDX11Q96FC9 970 aa13.78□□□□□ -0.2
SPIDR-203ENST00000517693 RTFDC1Q9BY42 306 aaPredicted RBP13.78□□□□□ -0.2
SPIDR-203ENST00000517693 MCM9Q9NXL9 1143 aa13.78□□□□□ -0.2
SPIDR-203ENST00000517693 HPS5Q9UPZ3 1129 aa13.78□□□□□ -0.2
SPIDR-203ENST00000517693 STK36Q9NRP7 1315 aa13.77□□□□□ -0.2
SPIDR-203ENST00000517693 CTDNEP1O95476 244 aa13.77□□□□□ -0.21
SPIDR-203ENST00000517693 BTDP43251 543 aa13.77□□□□□ -0.21
SPIDR-203ENST00000517693 UBE2HP62256 183 aa13.77□□□□□ -0.21
SPIDR-203ENST00000517693 GTF2IP78347 998 aa13.77□□□□□ -0.21
SPIDR-203ENST00000517693 MICU3Q86XE3 530 aa13.77□□□□□ -0.21
SPIDR-203ENST00000517693 KLHL34Q8N239 644 aa13.77□□□□□ -0.21
SPIDR-203ENST00000517693 NCOA5Q9HCD5 579 aaKnown RBP13.77□□□□□ -0.21
SPIDR-203ENST00000517693 CFAP45Q9UL16 551 aa13.77□□□□□ -0.21
SPIDR-203ENST00000517693 ELP1O95163 1332 aa13.77□□□□□ -0.21
SPIDR-203ENST00000517693 BAZ2AQ9UIF9 1905 aaKnown RBP13.77□□□□□ -0.21
SPIDR-203ENST00000517693 DLEC1Q9Y238 1755 aa13.77□□□□□ -0.21
SPIDR-203ENST00000517693 RIMBP2O15034 1052 aa13.76□□□□□ -0.21
SPIDR-203ENST00000517693 RANBP6O60518 1105 aaKnown RBP13.76□□□□□ -0.21
SPIDR-203ENST00000517693 TRIM22Q8IYM9 498 aa13.76□□□□□ -0.21
SPIDR-203ENST00000517693 ZSCAN10Q96SZ4 725 aaPredicted RBP13.76□□□□□ -0.21
SPIDR-203ENST00000517693 ORC3Q9UBD5 711 aaPredicted RBP13.76□□□□□ -0.21
SPIDR-203ENST00000517693 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.76□□□□□ -0.21
SPIDR-203ENST00000517693 DIXDC1Q155Q3 683 aa13.76□□□□□ -0.21
SPIDR-203ENST00000517693 IFIT1BQ5T764 474 aaKnown RBP13.76□□□□□ -0.21
SPIDR-203ENST00000517693 SOGA3Q5TF21 947 aa13.76□□□□□ -0.21
SPIDR-203ENST00000517693 CATIPQ7Z7H3 387 aa13.76□□□□□ -0.21
SPIDR-203ENST00000517693 TEX11Q8IYF3 940 aa13.76□□□□□ -0.21
SPIDR-203ENST00000517693 FBXW7Q969H0 707 aa13.76□□□□□ -0.21
SPIDR-203ENST00000517693 C8orf76Q96K31 380 aa13.76□□□□□ -0.21
SPIDR-203ENST00000517693 GPHNQ9NQX3 736 aaPredicted RBP13.76□□□□□ -0.21
SPIDR-203ENST00000517693 RBM28Q9NW13 759 aaKnown RBP13.76□□□□□ -0.21
SPIDR-203ENST00000517693 TNKSO95271 1327 aa13.75□□□□□ -0.21
SPIDR-203ENST00000517693 GOLGA6L3A6NEY3 463 aa13.75□□□□□ -0.21
SPIDR-203ENST00000517693 DDAH1O94760 285 aa13.75□□□□□ -0.21
SPIDR-203ENST00000517693 IARSP41252 1262 aaKnown RBP13.75□□□□□ -0.21
SPIDR-203ENST00000517693 TRIM29Q14134 588 aa13.75□□□□□ -0.21
SPIDR-203ENST00000517693 RTN1Q16799 776 aa13.75□□□□□ -0.21
SPIDR-203ENST00000517693 C12orf60Q5U649 245 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms