RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 IFIT1BQ5T764 474 aaKnown RBP11.42□□□□□ -0.58
EFCAB13-203ENST00000517484 IQCA1Q86XH1 822 aa11.42□□□□□ -0.58
EFCAB13-203ENST00000517484 ZNF384Q8TF68 577 aa11.42□□□□□ -0.58
EFCAB13-203ENST00000517484 SH2B1Q9NRF2 756 aaPredicted RBP11.42□□□□□ -0.58
EFCAB13-203ENST00000517484 HMGB1P09429 215 aaKnown RBP11.42□□□□□ -0.58
EFCAB13-203ENST00000517484 PLCD1P51178 756 aa11.42□□□□□ -0.58
EFCAB13-203ENST00000517484 TAF1P21675 1872 aa11.42□□□□□ -0.58
EFCAB13-203ENST00000517484 DDX11L8A8MPP1 907 aa11.41□□□□□ -0.58
EFCAB13-203ENST00000517484 ECM2O94769 699 aaPredicted RBP11.41□□□□□ -0.58
EFCAB13-203ENST00000517484 LDHCP07864 332 aa11.41□□□□□ -0.58
EFCAB13-203ENST00000517484 ESR2Q92731 530 aa11.41□□□□□ -0.58
EFCAB13-203ENST00000517484 TDRD3Q9H7E2 651 aaKnown RBP11.41□□□□□ -0.58
EFCAB13-203ENST00000517484 KCNJ14Q9UNX9 436 aa11.41□□□□□ -0.58
EFCAB13-203ENST00000517484 TCRBV5S4A2TA0A5A2 114 aa11.41□□□□□ -0.58
EFCAB13-203ENST00000517484 RASGRP2Q7LDG7 609 aa11.41□□□□□ -0.58
EFCAB13-203ENST00000517484 C8orf76Q96K31 380 aa11.41□□□□□ -0.58
EFCAB13-203ENST00000517484 DCP1AQ9NPI6 582 aaPredicted RBP11.41□□□□□ -0.58
EFCAB13-203ENST00000517484 ANGEL1Q9UNK9 670 aaKnown RBP11.41□□□□□ -0.58
EFCAB13-203ENST00000517484 ECE2O60344 883 aa11.41□□□□□ -0.58
EFCAB13-203ENST00000517484 SLC3A2P08195 630 aaKnown RBP11.41□□□□□ -0.58
EFCAB13-203ENST00000517484 ZSCAN22P10073 491 aaPredicted RBP11.41□□□□□ -0.58
EFCAB13-203ENST00000517484 TRIM29Q14134 588 aa11.41□□□□□ -0.58
EFCAB13-203ENST00000517484 PRAMEF18Q5VWM3 479 aa11.41□□□□□ -0.58
EFCAB13-203ENST00000517484 ARHGAP27Q6ZUM4 889 aa11.41□□□□□ -0.58
EFCAB13-203ENST00000517484 USP48Q86UV5 1035 aa11.41□□□□□ -0.58
EFCAB13-203ENST00000517484 CNKSR1Q969H4 720 aa11.41□□□□□ -0.58
EFCAB13-203ENST00000517484 VIRMAQ69YN4 1812 aaKnown RBP11.41□□□□□ -0.58
EFCAB13-203ENST00000517484 ARFGEF2Q9Y6D5 1785 aa11.4□□□□□ -0.58
EFCAB13-203ENST00000517484 ANTXR2P58335 489 aa11.4□□□□□ -0.58
EFCAB13-203ENST00000517484 SP8Q8IXZ3 490 aa11.4□□□□□ -0.58
EFCAB13-203ENST00000517484 TNKSO95271 1327 aa11.4□□□□□ -0.58
EFCAB13-203ENST00000517484 IARSP41252 1262 aaKnown RBP11.4□□□□□ -0.58
EFCAB13-203ENST00000517484 CTR9Q6PD62 1173 aa11.4□□□□□ -0.58
EFCAB13-203ENST00000517484 MIGA2Q7L4E1 593 aa11.4□□□□□ -0.58
EFCAB13-203ENST00000517484 EYA3Q99504 573 aa11.4□□□□□ -0.58
EFCAB13-203ENST00000517484 TM6SF1Q9BZW5 370 aa11.4□□□□□ -0.58
EFCAB13-203ENST00000517484 PDE4BQ07343 736 aa11.4□□□□□ -0.59
EFCAB13-203ENST00000517484 OGFOD1Q8N543 542 aa11.4□□□□□ -0.59
EFCAB13-203ENST00000517484 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.4□□□□□ -0.59
EFCAB13-203ENST00000517484 JDP2Q8WYK2 163 aa11.4□□□□□ -0.59
EFCAB13-203ENST00000517484 ERCC4Q92889 916 aaPredicted RBP11.4□□□□□ -0.59
EFCAB13-203ENST00000517484 SYCE3A1L190 88 aa11.39□□□□□ -0.59
EFCAB13-203ENST00000517484 ME1P48163 572 aa11.39□□□□□ -0.59
EFCAB13-203ENST00000517484 ST3GAL1Q11201 340 aa11.39□□□□□ -0.59
EFCAB13-203ENST00000517484 NFIAQ12857 509 aa11.39□□□□□ -0.59
EFCAB13-203ENST00000517484 TDRD7Q8NHU6 1098 aaKnown RBP11.39□□□□□ -0.59
EFCAB13-203ENST00000517484 CRAMP1Q96RY5 1269 aa11.39□□□□□ -0.59
EFCAB13-203ENST00000517484 ALG1Q9BT22 464 aa11.39□□□□□ -0.59
EFCAB13-203ENST00000517484 V9GY48 417 aaPredicted RBP11.39□□□□□ -0.59
EFCAB13-203ENST00000517484 COL22A1Q8NFW1 1626 aaPredicted RBP11.39□□□□□ -0.59
EFCAB13-203ENST00000517484 SIPA1L3O60292 1781 aaPredicted RBP11.39□□□□□ -0.59
EFCAB13-203ENST00000517484 MARCKSP29966 332 aaPredicted RBP11.39□□□□□ -0.59
EFCAB13-203ENST00000517484 GTF3C6Q969F1 213 aa11.39□□□□□ -0.59
EFCAB13-203ENST00000517484 RNF41Q9H4P4 317 aaPredicted RBP11.39□□□□□ -0.59
EFCAB13-203ENST00000517484 CIZ1Q9ULV3 898 aaPredicted RBP11.39□□□□□ -0.59
EFCAB13-203ENST00000517484 F13A1P00488 732 aa11.39□□□□□ -0.59
EFCAB13-203ENST00000517484 GNAT2P19087 354 aa11.39□□□□□ -0.59
EFCAB13-203ENST00000517484 CERS5Q8N5B7 392 aa11.39□□□□□ -0.59
EFCAB13-203ENST00000517484 SPATA32Q96LK8 384 aa11.39□□□□□ -0.59
EFCAB13-203ENST00000517484 NBPF3Q9H094 633 aa11.39□□□□□ -0.59
EFCAB13-203ENST00000517484 TACC3Q9Y6A5 838 aa11.39□□□□□ -0.59
EFCAB13-203ENST00000517484 CDC27P30260 824 aa11.38□□□□□ -0.59
EFCAB13-203ENST00000517484 RTN1Q16799 776 aa11.38□□□□□ -0.59
EFCAB13-203ENST00000517484 CCDC84Q86UT8 332 aaPredicted RBP11.38□□□□□ -0.59
EFCAB13-203ENST00000517484 LRRC47Q8N1G4 583 aaKnown RBP11.38□□□□□ -0.59
EFCAB13-203ENST00000517484 RIOK1Q9BRS2 568 aaKnown RBP11.38□□□□□ -0.59
EFCAB13-203ENST00000517484 KRT23Q9C075 422 aa11.38□□□□□ -0.59
EFCAB13-203ENST00000517484 GDF11O95390 407 aa11.38□□□□□ -0.59
EFCAB13-203ENST00000517484 PDCP20941 246 aa11.38□□□□□ -0.59
EFCAB13-203ENST00000517484 GSTO1P78417 241 aa11.38□□□□□ -0.59
EFCAB13-203ENST00000517484 CRY2Q49AN0 593 aa11.38□□□□□ -0.59
EFCAB13-203ENST00000517484 CATIPQ7Z7H3 387 aa11.38□□□□□ -0.59
EFCAB13-203ENST00000517484 UBA5Q9GZZ9 404 aa11.38□□□□□ -0.59
EFCAB13-203ENST00000517484 SHANK3Q9BYB0 1731 aa11.38□□□□□ -0.59
EFCAB13-203ENST00000517484 SPECC1Q5M775 1068 aa11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 ISM2Q6H9L7 571 aa11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 ZFPM1Q8IX07 1006 aa11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 CKAP2LQ8IYA6 745 aa11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 TEKT1Q969V4 418 aa11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 KAT14Q9H8E8 782 aa11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 GPCPD1Q9NPB8 672 aa11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 MTMR6Q9Y217 621 aa11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 CUL4AQ13619 759 aa11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 APOA5Q6Q788 366 aa11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 KIF3AQ9Y496 699 aa11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 A0A087WWV3 80 aa11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 SHTN1A0MZ66 631 aa11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 MB21D2Q8IYB1 491 aaPredicted RBP11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 TRIM22Q8IYM9 498 aa11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 SPICE1Q8N0Z3 855 aa11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 CTCFLQ8NI51 663 aaPredicted RBP11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 VPS54Q9P1Q0 977 aa11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 PIM2Q9P1W9 311 aa11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 FZD1Q9UP38 647 aa11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 DAGLAQ9Y4D2 1042 aa11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 FRMPD2Q68DX3 1309 aaPredicted RBP11.37□□□□□ -0.59
EFCAB13-203ENST00000517484 GOLGA6L3A6NEY3 463 aa11.36□□□□□ -0.59
EFCAB13-203ENST00000517484 GUCY1A2P33402 732 aa11.36□□□□□ -0.59
EFCAB13-203ENST00000517484 RASSF7Q02833 373 aa11.36□□□□□ -0.59
EFCAB13-203ENST00000517484 CCDC96Q2M329 555 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms